DK950149 |
Clone id |
TST38A01NGRL0007_O07 |
Library |
TST38 |
Length |
633 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_O07. 5' end sequence. |
Accession |
DK950149 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL117Contig1 |
Sequence |
GTCATCTGTGCTTTGTGGTGAAGAAGCGGACATCAGCGAGTGCAGGAGCGCTGCAGCTAT GGCGGCCCAGCAGATGAGCAAGAAGCGCAAGTTTGTGGCAGATGGCGTTTTTTTTGCCGA GTTGAACGAAGTTCTCACGCGAGAGCTTGCTGAAGATGGGTACTCTGGCGTAGAGGTCCG GGTTACACCCATGCGAACTGAAATCATTATTCGTGCAACAAGGACCCAGAATGTGCTTGG GGATAAGGGGAGAAGAATCAGAGAGTTAACATCTTTGGTTCAGAAGAGGTTTAACTTTCC TGAAGGCACCGTTGAATTGTATGCTGAGAAAGTTAACAATCGGGGTCTTTGTGCTATTGC ACAAGCAGAGTCACTCCGTTACAAGCTTCTTGGAGGGCTTGCTGTCAGAAGGGCTTGCTA TGGTGTCCTAAGGTTTGTCATGGAGAGTGGCGCGAAGGGTTGTGAGGTCATTGTGAGTGG TAAGCTGAGAGCCCAGCGAGCGAAGTCGATGAAGTTCAAAGATGGGTATATGATTTCCTC TGGGCATCCTGTGAACTTGTACATTGACTCTGCAGTTCGCCACGTGCTTTTGAGACAGGG AGTCTTGGGCATCAAGGTCAAGATCATGTTGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M339 |
Definition |
sp|Q9M339|RS32_ARATH 40S ribosomal protein S3-2 OS=Arabidopsis thaliana |
Align length |
181 |
Score (bit) |
328.0 |
E-value |
2.0e-89 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FHH2 |
Definition |
tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
181 |
Score (bit) |
346.0 |
E-value |
8.0e-94 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950149|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0007_O07, 5' (633 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea m... 346 8e-94 tr|A9NTN5|A9NTN5_PICSI Putative uncharacterized protein OS=Picea... 342 1e-92 tr|A9NR91|A9NR91_PICSI Putative uncharacterized protein OS=Picea... 342 1e-92 tr|Q94LL1|Q94LL1_ORYSA Putative 40S ribosomal protein; contains ... 341 2e-92 tr|Q6YTY2|Q6YTY2_ORYSJ Os07g0608500 protein OS=Oryza sativa subs... 341 2e-92 tr|A2YNK7|A2YNK7_ORYSI Putative uncharacterized protein OS=Oryza... 341 2e-92 tr|A7P6K3|A7P6K3_VITVI Chromosome chr9 scaffold_7, whole genome ... 337 4e-91 tr|A9RVF7|A9RVF7_PHYPA Predicted protein OS=Physcomitrella paten... 336 6e-91 tr|A9RUL6|A9RUL6_PHYPA Predicted protein OS=Physcomitrella paten... 336 6e-91 tr|A7PDZ8|A7PDZ8_VITVI Chromosome chr11 scaffold_13, whole genom... 335 2e-90 tr|Q2VCJ9|Q2VCJ9_SOLTU Putative uncharacterized protein OS=Solan... 333 4e-90 tr|A9PHW0|A9PHW0_POPTR Putative uncharacterized protein OS=Popul... 333 5e-90 tr|A9PAW1|A9PAW1_POPTR Putative uncharacterized protein OS=Popul... 333 5e-90 tr|B3TLR8|B3TLR8_ELAGV Ribosomal protein OS=Elaeis guineensis va... 333 7e-90 tr|Q75G91|Q75G91_ORYSJ Os03g0577000 protein OS=Oryza sativa subs... 332 1e-89 tr|B7FH64|B7FH64_MEDTR Putative uncharacterized protein OS=Medic... 332 1e-89 tr|A9PBQ6|A9PBQ6_POPTR Putative uncharacterized protein OS=Popul... 332 1e-89 tr|A2XIT7|A2XIT7_ORYSI Putative uncharacterized protein OS=Oryza... 332 1e-89 tr|B6TB97|B6TB97_MAIZE 40S ribosomal protein S3 OS=Zea mays PE=2... 331 3e-89 tr|B7FGM5|B7FGM5_MEDTR Putative uncharacterized protein OS=Medic... 330 3e-89 tr|B6TM40|B6TM40_MAIZE 40S ribosomal protein S3 OS=Zea mays PE=2... 330 3e-89 tr|Q8L804|Q8L804_WHEAT Putative 40S ribosomal protein S3 OS=Trit... 327 4e-88 tr|Q1WLZ2|Q1WLZ2_CHLIN 40S ribosomal protein S3 OS=Chlamydomonas... 326 6e-88 tr|A8I4P5|A8I4P5_CHLRE Ribosomal protein S3 OS=Chlamydomonas rei... 322 2e-86 tr|Q1XGD5|Q1XGD5_LAMJA Ribosomal protein S3 (Fragment) OS=Lampet... 314 3e-84 tr|Q9D0A2|Q9D0A2_MOUSE Putative uncharacterized protein OS=Mus m... 313 5e-84 tr|Q7ZYT3|Q7ZYT3_XENLA Ribosomal protein S1a protein OS=Xenopus ... 311 2e-83 tr|Q6P8G2|Q6P8G2_XENTR Ribosomal protein S3 OS=Xenopus tropicali... 311 2e-83 tr|Q5ZJC1|Q5ZJC1_CHICK Putative uncharacterized protein OS=Gallu... 311 2e-83 tr|B5FZR3|B5FZR3_TAEGU Putative ribosomal protein S3 OS=Taeniopy... 311 2e-83
>tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 232
Score = 346 bits (887), Expect = 8e-94 Identities = 177/181 (97%), Positives = 180/181 (99%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRFNFPEG VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIM 628 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIM Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIM 191
Query: 629 L 631 L Sbjct: 192 L 192
>tr|A9NTN5|A9NTN5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 233
Score = 342 bits (877), Expect = 1e-92 Identities = 175/181 (96%), Positives = 178/181 (98%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIM 628 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YID AVRHVLLRQGVLGIKVKIM Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDKAVRHVLLRQGVLGIKVKIM 189
Query: 629 L 631 L Sbjct: 190 L 190
>tr|A9NR91|A9NR91_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 233
Score = 342 bits (876), Expect = 1e-92 Identities = 175/181 (96%), Positives = 178/181 (98%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIM 628 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YID AVRHVLLRQGVLGIKVKIM Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDRAVRHVLLRQGVLGIKVKIM 189
Query: 629 L 631 L Sbjct: 190 L 190
>tr|Q94LL1|Q94LL1_ORYSA Putative 40S ribosomal protein; contains C-terminal domain OS=Oryza sativa GN=OSJNBb0024A20.19 PE=3 SV=1 Length = 233
Score = 341 bits (875), Expect = 2e-92 Identities = 175/181 (96%), Positives = 179/181 (98%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIM 628 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG+PVNLYIDSAVRHVLLRQGVLGIKVKIM Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVKIM 191
Query: 629 L 631 L Sbjct: 192 L 192
>tr|Q6YTY2|Q6YTY2_ORYSJ Os07g0608500 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0018L13.2 PE=2 SV=1 Length = 233
Score = 341 bits (875), Expect = 2e-92 Identities = 175/181 (96%), Positives = 179/181 (98%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIM 628 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG+PVNLYIDSAVRHVLLRQGVLGIKVKIM Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVKIM 191
Query: 629 L 631 L Sbjct: 192 L 192
>tr|A2YNK7|A2YNK7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26820 PE=3 SV=1 Length = 233
Score = 341 bits (875), Expect = 2e-92 Identities = 175/181 (96%), Positives = 179/181 (98%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIM 628 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG+PVNLYIDSAVRHVLLRQGVLGIKVKIM Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVKIM 191
Query: 629 L 631 L Sbjct: 192 L 192
>tr|A7P6K3|A7P6K3_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034104001 PE=3 SV=1 Length = 234
Score = 337 bits (864), Expect = 4e-91 Identities = 174/181 (96%), Positives = 176/181 (97%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRF FPE TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 70 TSVVQKRFKFPENTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIM 628 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PV YIDSAVRHVLLRQGVLGIKVKIM Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIM 189
Query: 629 L 631 L Sbjct: 190 L 190
>tr|A9RVF7|A9RVF7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162268 PE=3 SV=1 Length = 230
Score = 336 bits (862), Expect = 6e-91 Identities = 172/181 (95%), Positives = 177/181 (97%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRF FPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIM 628 GAKGCEVIVSGKLRA RAKSMKFKDGYMISSG PVN YIDSAVRHV+LRQGVLGIKVKIM Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQGVLGIKVKIM 189
Query: 629 L 631 L Sbjct: 190 L 190
>tr|A9RUL6|A9RUL6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_166897 PE=3 SV=1 Length = 231
Score = 336 bits (862), Expect = 6e-91 Identities = 172/181 (95%), Positives = 177/181 (97%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRF FPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIM 628 GAKGCEVIVSGKLRA RAKSMKFKDGYMISSG PVN YIDSAVRHV+LRQGVLGIKVKIM Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQGVLGIKVKIM 189
Query: 629 L 631 L Sbjct: 190 L 190
>tr|A7PDZ8|A7PDZ8_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016476001 PE=3 SV=1 Length = 234
Score = 335 bits (858), Expect = 2e-90 Identities = 171/181 (94%), Positives = 176/181 (97%) Frame = +2
Query: 89 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 268 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 269 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 448 TS+VQKRF FPE +VELYAEKVNNRGLCA+AQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 449 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIM 628 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PV YIDSAVRHVLLRQGVLGIKVKIM Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIM 189
Query: 629 L 631 L Sbjct: 190 L 190
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