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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950152
Clone id TST38A01NGRL0007_O10
Library
Length 632
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_O10. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
TGATGGGATAACGCGGTGATGGAGGTGGTGGCGTCAAGCTTGCATGTGTCTCCTTTAGCA
GGTTCAACATGGCGAGCCACCGTACACGCAGATAAAAACCGCATTCCTGTGCGCGCCAGA
CAAGGGCCTGCTGTGAAAGCTAAATGGCCTTTTGCTTTGGTGTTGGGGGTTGCTGTGCTT
CTTCATCCGGGGCCTGACTCTTCTGATGATTTGGCCCTTGCTTTTGACTGGTTTGGAAAC
TCCTCTTCTTCCATTCAGAAGGATCCCGTCGAGCCCTTCACCCTATACGGCAGCGTTTTC
AAAAAGTACCTCATTGAAAATATTGTGGAGGGAAAGGTTGTGTCTAGAAGGAAAGGTTTT
ACTTCTACCGCATGTGTAAATGCTTTGGATGCTGACAAGGAGACGCCTGAGCTACAGGGA
ATCCTGGCTGGTTTGAAGGTAATTATTATAGGTGAACCTAAGTGCGCAAAGAGTGAGGGA
CAATCTAGAGAAGAAACCTGTTTCCCTTCTTGTAAGGTCGCATGTAGACGGGCCATTGAA
CAACACCTGGCTGAAGTCACAAAGGAAACAGGCTATGTACTTGATTCGAAGGACAAGGCT
AAGGTGATAGAATCTTGTGGCAATCAGTGCGC
■■Homology search results ■■ -
sp_hit_id Q39102
Definition sp|Q39102|FTSH1_ARATH Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana
Align length 139
Score (bit) 32.7
E-value 1.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950152|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_O10, 5'
         (632 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q39102|FTSH1_ARATH Cell division protease ftsH homolog 1, chl...    33   1.6  
sp|Q8TF39|ZN483_HUMAN Zinc finger protein 483 OS=Homo sapiens GN...    32   2.1  
sp|O17919|DKC1_CAEEL Putative H/ACA ribonucleoprotein complex su...    32   3.5  
sp|Q7SBU6|VID21_NEUCR Chromatin modification-related protein vid...    31   4.6  
sp|Q9D7C9|NRK2_MOUSE Nicotinamide riboside kinase 2 OS=Mus muscu...    31   4.6  
sp|O43405|COCH_HUMAN Cochlin OS=Homo sapiens GN=COCH PE=1 SV=1         31   4.6  
sp|Q5ZKW5|AR2BP_CHICK ADP-ribosylation factor-like protein 2-bin...    31   4.6  
sp|Q818R5|FOLD_BACCR Bifunctional protein folD OS=Bacillus cereu...    30   7.9  
sp|Q731B2|FOLD_BACC1 Bifunctional protein folD OS=Bacillus cereu...    30   7.9  
sp|Q1IPK2|CARB_ACIBL Carbamoyl-phosphate synthase large chain OS...    30   7.9  

>sp|Q39102|FTSH1_ARATH Cell division protease ftsH homolog 1,
           chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2
          Length = 716

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 3/139 (2%)
 Frame = +1

Query: 13  AVMEVVASSLHVSPLAGSTWRATVHADKNRIPVRARQGPAVKAKWPFALVLGVAVLLHPG 192
           A+  ++ SS+  SPLA +        D+   P    +  AVK   P  L +   +L  P 
Sbjct: 69  ALAAILLSSISSSPLALAV------VDEPASPSVVIESQAVKPSTPSPLFIQNEILKAPS 122

Query: 193 PDSSDDLALAFDW-FGNSSSSIQKDPVE--PFTLYGSVFKKYLIENIVEGKVVSRRKGFT 363
           P SS DL     W +    ++++K  VE   F+  GSV +   ++N     +V       
Sbjct: 123 PKSS-DLPEGSQWRYSEFLNAVKKGKVERVRFSKDGSVVQLTAVDNRRASVIVPNDPDLI 181

Query: 364 STACVNALDADKETPELQG 420
               +N +D      E  G
Sbjct: 182 DILAMNGVDISVSEGESSG 200


>sp|Q8TF39|ZN483_HUMAN Zinc finger protein 483 OS=Homo sapiens
           GN=ZNF483 PE=1 SV=3
          Length = 744

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -3

Query: 225 KSKGQIIRRVRPRMKKHSNPQHQSKRPFSFHS 130
           K    +I+ +R  ++K S   ++SK+PFSFHS
Sbjct: 312 KETSDLIKHLRVYLRKKSRRYNESKKPFSFHS 343


>sp|O17919|DKC1_CAEEL Putative H/ACA ribonucleoprotein complex
           subunit 4 OS=Caenorhabditis elegans GN=K01G5.5 PE=2 SV=1
          Length = 445

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -2

Query: 262 PSEWKKRSFQTSQKQGPNHQKSQAPDEEAQQPPTPKQK 149
           P  W K   QTS K+    +K + PDEE ++ P  K K
Sbjct: 397 PKSWAKEYVQTSTKK--EVKKEETPDEEEEEAPKKKSK 432


>sp|Q7SBU6|VID21_NEUCR Chromatin modification-related protein vid-21
            OS=Neurospora crassa GN=vid-21 PE=3 SV=1
          Length = 2189

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -2

Query: 229  SQKQGPNHQKSQAPDEEAQQPPTPKQ 152
            +Q Q P  Q++QAP  +AQQP  P+Q
Sbjct: 1965 AQAQHPQTQQAQAPQAQAQQPQPPQQ 1990



 Score = 30.4 bits (67), Expect = 7.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 262  PSEWKKRSFQTSQKQGPNHQKSQAPDEEAQQPPTPK 155
            P + ++   Q  Q+Q P HQ+ Q P    QQP  P+
Sbjct: 1368 PQQQQQLQQQQPQQQQPQHQQVQTPQPAQQQPQQPQ 1403


>sp|Q9D7C9|NRK2_MOUSE Nicotinamide riboside kinase 2 OS=Mus musculus
           GN=Itgb1bp3 PE=1 SV=1
          Length = 195

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = -1

Query: 431 PARIPCSSGVSLSASKAFTHAVEVKPFLLDTTFPST-IFSMRYFLKTLPY 285
           P +   + GVSL +  + TH + ++ FLL +  P   ++S RYFL T+PY
Sbjct: 76  PHKFARAHGVSLQSGASDTHVLLLEGFLLYSYRPLVDLYSQRYFL-TVPY 124


>sp|O43405|COCH_HUMAN Cochlin OS=Homo sapiens GN=COCH PE=1 SV=1
          Length = 550

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
 Frame = +1

Query: 133 VKAKWPFALVLGVAVLLHPGPDSSDDLA-LAFDWFGNSSSSIQKD----------PVEPF 279
           + A W  AL LGV +LL PGP  S+  A +A   F      I+K+          P+E F
Sbjct: 1   MSAAWIPALGLGVCLLLLPGPAGSEGAAPIAITCF-TRGLDIRKEKADVLCPGGCPLEEF 59

Query: 280 TLYGSV 297
           ++YG++
Sbjct: 60  SVYGNI 65


>sp|Q5ZKW5|AR2BP_CHICK ADP-ribosylation factor-like protein
           2-binding protein OS=Gallus gallus GN=ARL2BP PE=2 SV=1
          Length = 156

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 262 DPVEPFTLYGSVFKKY--LIENIVEGKVVSRRKGFTSTACVNALDADKE 402
           D  E   +Y S+F +Y  LIE  +E K++ R  GF  TA   +L   K+
Sbjct: 54  DSEENKLIYTSIFNEYISLIEKYIEEKLLDRIPGFNMTAFTMSLQQHKD 102


>sp|Q818R5|FOLD_BACCR Bifunctional protein folD OS=Bacillus cereus
           (strain ATCC 14579 / DSM 31) GN=folD PE=3 SV=1
          Length = 286

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 21/64 (32%), Positives = 35/64 (54%)
 Frame = +1

Query: 310 LIENIVEGKVVSRRKGFTSTACVNALDADKETPELQGILAGLKVIIIGEPKCAKSEGQSR 489
           ++  I++G  V+ +K    T  V  L   KE    QGI+ GL VI++GE   ++S  + +
Sbjct: 1   MVAVIIKGNEVAEKKRAQLTEEVVKL---KE----QGIVPGLAVILVGEDPASRSYVKGK 53

Query: 490 EETC 501
           E+ C
Sbjct: 54  EKGC 57


>sp|Q731B2|FOLD_BACC1 Bifunctional protein folD OS=Bacillus cereus
           (strain ATCC 10987) GN=folD PE=3 SV=1
          Length = 286

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 21/64 (32%), Positives = 35/64 (54%)
 Frame = +1

Query: 310 LIENIVEGKVVSRRKGFTSTACVNALDADKETPELQGILAGLKVIIIGEPKCAKSEGQSR 489
           ++  I++G  V+ +K    T  V  L   KE    QGI+ GL VI++GE   ++S  + +
Sbjct: 1   MVAVIIKGNEVAEKKRAQLTEEVVKL---KE----QGIVPGLAVILVGEDPASRSYVKGK 53

Query: 490 EETC 501
           E+ C
Sbjct: 54  EKGC 57


>sp|Q1IPK2|CARB_ACIBL Carbamoyl-phosphate synthase large chain
           OS=Acidobacteria bacterium (strain Ellin345) GN=carB
           PE=3 SV=1
          Length = 1102

 Score = 30.4 bits (67), Expect = 7.9
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +1

Query: 430 GLKVIIIGEPKCAKSEGQSREETCFPSCKVACRRAIEQHLAEVTKE 567
           G  ++I   P+ ++S   + + T FP  K+A R A+   L E+T +
Sbjct: 301 GRMIVIEMNPRVSRSSALASKATGFPIAKIAARLAVGYTLDEITND 346
tr_hit_id A9S9M8
Definition tr|A9S9M8|A9S9M8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 183
Score (bit) 185.0
E-value 2.0e-45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950152|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_O10, 5'
         (632 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S9M8|A9S9M8_PHYPA Predicted protein OS=Physcomitrella paten...   185   2e-45
tr|A9NQC9|A9NQC9_PICSI Putative uncharacterized protein OS=Picea...   168   2e-40
tr|A8J590|A8J590_CHLRE Predicted protein OS=Chlamydomonas reinha...   132   2e-29
tr|Q017B1|Q017B1_OSTTA Chromosome 06 contig 1, DNA sequence OS=O...    66   2e-09
tr|A4RYV4|A4RYV4_OSTLU Predicted protein OS=Ostreococcus lucimar...    49   3e-04
tr|A0ZEA7|A0ZEA7_NODSP Permease protein of sugar ABC transporter...    36   2.2  
tr|B0NJK2|B0NJK2_EUBSP Putative uncharacterized protein OS=Clost...    35   2.9  
tr|A0EYW8|A0EYW8_9ABAC Tlp-20 OS=Ecotropis obliqua NPV PE=4 SV=1       35   4.9  
tr|B0TAW4|B0TAW4_HELMI S-layer protein, putative OS=Heliobacteri...    35   4.9  
tr|B0RAY5|B0RAY5_CLAMS Putative DNA repair helicase OS=Clavibact...    35   4.9  
tr|A6DA75|A6DA75_9PROT tRNA modification GTPase TrmE OS=Caminiba...    35   4.9  
tr|Q12E09|Q12E09_POLSJ 4Fe-4S ferredoxin, iron-sulfur binding OS...    34   6.4  
tr|A5CTW9|A5CTW9_CLAM3 Putative ATP-dependent DNA helicase OS=Cl...    34   6.4  
tr|A1WE69|A1WE69_VEREI 4Fe-4S ferredoxin, iron-sulfur binding do...    34   6.4  
tr|Q8YLD5|Q8YLD5_ANASP Permease protein of sugar ABC transporter...    34   8.3  
tr|Q7P0T4|Q7P0T4_CHRVO Putative uncharacterized protein OS=Chrom...    34   8.3  
tr|A1YFF2|A1YFF2_SAGLB ZNF483 (Fragment) OS=Saguinus labiatus GN...    34   8.3  
tr|B4LV15|B4LV15_DROVI GJ14461 OS=Drosophila virilis GN=GJ14461 ...    34   8.3  

>tr|A9S9M8|A9S9M8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_163643 PE=4 SV=1
          Length = 306

 Score =  185 bits (470), Expect = 2e-45
 Identities = 96/183 (52%), Positives = 120/183 (65%), Gaps = 20/183 (10%)
 Frame = +1

Query: 142 KWPFALVLGVAVLLHPGPDSSDDLALAFDWFGNSSSSIQKDPVEPFTLYGSVFKKYLIEN 321
           KW  A +   A ++  G  +  + A+AF+WFG     ++KDPVEPFTLYGS+ KKYLIE+
Sbjct: 109 KWMMATL---AAMVMVGAAAVGEPAMAFNWFGQPK--VEKDPVEPFTLYGSILKKYLIED 163

Query: 322 IVEGKVVSRRKGFTSTACVNALDADKETPELQGILAGLK--------------------V 441
           +V+ KVV RRKGFT++ CVNALDA KETPELQG+ AGLK                    V
Sbjct: 164 VVDNKVVGRRKGFTASTCVNALDASKETPELQGVPAGLKHCNTLWDCQCLFPISTDYDEV 223

Query: 442 IIIGEPKCAKSEGQSREETCFPSCKVACRRAIEQHLAEVTKETGYVLDSKDKAKVIESCG 621
            IIGEP CAK +GQ+REE+C   C+ AC  A+ +HL EV +ETGYVLD  D  KV ESC 
Sbjct: 224 TIIGEPSCAKGQGQTREESCATPCERACESAVSRHLVEVKEETGYVLDKSDVKKVTESCT 283

Query: 622 NQC 630
           +QC
Sbjct: 284 SQC 286


>tr|A9NQC9|A9NQC9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 200

 Score =  168 bits (426), Expect = 2e-40
 Identities = 77/144 (53%), Positives = 107/144 (74%), Gaps = 4/144 (2%)
 Frame = +1

Query: 211 LALAFDWFGNSSSSI----QKDPVEPFTLYGSVFKKYLIENIVEGKVVSRRKGFTSTACV 378
           LA+A  W     ++I    +KDP++PFTLYGS+FKKY+IE +V+GKV+SR+KG T+ ACV
Sbjct: 48  LAVALSWQLGCGTAIAFGFEKDPIQPFTLYGSIFKKYVIEQLVDGKVISRKKGLTANACV 107

Query: 379 NALDADKETPELQGILAGLKVIIIGEPKCAKSEGQSREETCFPSCKVACRRAIEQHLAEV 558
           NAL+A +ETPELQ +   +KV +IG P C K EGQ++E++C   C+ AC  AI +HLA V
Sbjct: 108 NALEASRETPELQRLPIDVKVNVIGNPSCEKGEGQTKEDSCLLPCRKACDVAISRHLAAV 167

Query: 559 TKETGYVLDSKDKAKVIESCGNQC 630
            KETGY+LD  D++KV++SC  +C
Sbjct: 168 KKETGYILDVTDRSKVVDSCSTRC 191


>tr|A8J590|A8J590_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_192560 PE=4 SV=1
          Length = 1148

 Score =  132 bits (331), Expect = 2e-29
 Identities = 64/147 (43%), Positives = 94/147 (63%), Gaps = 1/147 (0%)
 Frame = +1

Query: 193 PDSSDDLALAFDWFGNSSSS-IQKDPVEPFTLYGSVFKKYLIENIVEGKVVSRRKGFTST 369
           P+   DLA  F   G++ S+  ++DP+ PFTLYG+ FKKYLIE +   KV+SR+KGFT  
Sbjct: 89  PNPLADLAAGFFGGGDADSTPAERDPITPFTLYGTSFKKYLIEQLQGEKVISRKKGFTVD 148

Query: 370 ACVNALDADKETPELQGILAGLKVIIIGEPKCAKSEGQSREETCFPSCKVACRRAIEQHL 549
           ACV A+D  +ETP+ QG+  G K +   +  C K+EGQ  ++ C  +C+ AC  AI+ + 
Sbjct: 149 ACVGAVDITQETPQFQGLPTGDKALYAKDRVCKKAEGQELKDVCRTACESACNEAIDLYA 208

Query: 550 AEVTKETGYVLDSKDKAKVIESCGNQC 630
            +V +ETG+ L   DKA++ +SC   C
Sbjct: 209 KQVKEETGFALLESDKARLAKSCSRNC 235


>tr|Q017B1|Q017B1_OSTTA Chromosome 06 contig 1, DNA sequence
           OS=Ostreococcus tauri GN=Ot06g02410 PE=4 SV=1
          Length = 165

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
 Frame = +1

Query: 199 SSDDLALAFDWFGNSSSSIQKDPVEPFTLYGSVFKKYLIENIVEG----KVVSRRKGFTS 366
           SS D+A A + F +SSSS   DP+EPFT++G++ K + +  + +     K++ R++G T+
Sbjct: 2   SSCDIARARELFPSSSSS--DDPIEPFTVFGTIEKLFEVRVMDDANGGTKIIGRKRGITA 59

Query: 367 TACVNAL---DADKETPELQGILAGLKVIIIGEPKCAKSEGQSREETCFPSCKVACRRAI 537
            AC       D  +  P      A      +GE K    E +     C P+C  +C RA+
Sbjct: 60  KACTMLFLRRDTGERAPTPDRASACEVAGGVGEIK----ETKDMLRACAPACSKSCGRAV 115

Query: 538 EQHLAEVTKETGYVLDSKDKAKVIESCGNQC 630
            ++     + TG+ L  + + KV++SC   C
Sbjct: 116 GEYANAQERGTGFGLPKEARQKVLKSCTVTC 146


>tr|A4RYV4|A4RYV4_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_32157 PE=4 SV=1
          Length = 110

 Score = 48.5 bits (114), Expect = 3e-04
 Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
 Frame = +1

Query: 370 ACVNALDADKETPELQGILAGLKVIIIGEPKCAKSEGQSREE-----TCFPSCKVACRRA 534
           +CVN + A ++ P  +G    L+     E   A++ G+ RE+      C P+CK +C RA
Sbjct: 5   SCVNVVPASRQGP--RGPPEALRPSACAE---AEALGEIREQRDMLKACAPACKASCSRA 59

Query: 535 IEQHLAEVTKETGYVLDSKDKAKVIESCGNQC 630
           I ++     K TG+ LD+K K +V+++C   C
Sbjct: 60  IAEYDEGQRKTTGFGLDAKAKERVLKACVVTC 91


>tr|A0ZEA7|A0ZEA7_NODSP Permease protein of sugar ABC transporter
           OS=Nodularia spumigena CCY 9414 GN=N9414_07621 PE=4 SV=1
          Length = 350

 Score = 35.8 bits (81), Expect = 2.2
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +2

Query: 260 RIPSSPSPYTAAFSKSTSLKILWRERLCLEGKVLLLPHV*MLW-MLTRRRLSYRES 424
           + P++PSPY+   +KS  L I+  E L   G +L L    +LW +L R  L Y+ S
Sbjct: 166 KAPAAPSPYSPLIAKSAQLPIILPESLAHAGILLALLAAGLLWVLLVRSPLGYQIS 221


>tr|B0NJK2|B0NJK2_EUBSP Putative uncharacterized protein
           OS=Clostridium scindens ATCC 35704 GN=CLOSCI_03688 PE=4
           SV=1
          Length = 604

 Score = 35.4 bits (80), Expect = 2.9
 Identities = 33/126 (26%), Positives = 55/126 (43%)
 Frame = +1

Query: 166 GVAVLLHPGPDSSDDLALAFDWFGNSSSSIQKDPVEPFTLYGSVFKKYLIENIVEGKVVS 345
           G+  +++   + +D + +  D    + +  Q  P    T+ G V  K  IE I+EG  VS
Sbjct: 442 GLTGVINAVYNQTDIVLVVLDNSTTAMTGHQPHPGTGKTMMGEVVAKVSIEKILEGIGVS 501

Query: 346 RRKGFTSTACVNALDADKETPELQGILAGLKVIIIGEPKCAKSEGQSREETCFPSCKVAC 525
           R           A++A KE  +     AG++V+I   P  A +   +R      SC   C
Sbjct: 502 RIVKADPLNLNEAVEAVKEVMD----EAGVRVVIFKSPCIAVTRPTARYHVAADSC-TFC 556

Query: 526 RRAIEQ 543
           R+ I +
Sbjct: 557 RQCIRE 562


>tr|A0EYW8|A0EYW8_9ABAC Tlp-20 OS=Ecotropis obliqua NPV PE=4 SV=1
          Length = 284

 Score = 34.7 bits (78), Expect = 4.9
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = +1

Query: 196 DSSDDLALAFDWFGNSSSSIQKDPVEPFTLYGSVFKKYLIENIVEGKV 339
           D S+D A   D    SSSS + D  + FT   S FKK   +N+ +GK+
Sbjct: 237 DISNDDATENDDSSESSSSDEYDATDKFTAIDSTFKKQKYDNVEQGKI 284


>tr|B0TAW4|B0TAW4_HELMI S-layer protein, putative OS=Heliobacterium
           modesticaldum (strain ATCC 51547 / Ice1) GN=Helmi_24500
           PE=4 SV=1
          Length = 368

 Score = 34.7 bits (78), Expect = 4.9
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = +1

Query: 313 IENIVEGKVVSRRKGFTSTACVNALDADKETPELQGILAGL--KVIIIGEP 459
           IE  V+G+   + + FT        DADK  PELQG LAGL  + ++IG P
Sbjct: 238 IEESVKGEEAEQLRSFT--------DADKTKPELQGRLAGLVKQNLVIGRP 280


>tr|B0RAY5|B0RAY5_CLAMS Putative DNA repair helicase OS=Clavibacter
           michiganensis subsp. sepedonicus (strain ATCC 33113 /
           JCM 9667) GN=CMS2760 PE=4 SV=1
          Length = 546

 Score = 34.7 bits (78), Expect = 4.9
 Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 6/168 (3%)
 Frame = +1

Query: 7   DNAVMEVVASSLHVSPLAGSTWRATVHADKNRIPVRAR---QGPAVKAKWPFALVLGVAV 177
           ++AV+  VASS  ++PL      AT +    R+   AR   +   VK  WP   + G   
Sbjct: 112 ESAVLSEVASSRRIAPLLTERVDATTY----RVQAWARGQLKQELVKIGWPAEDLAGYT- 166

Query: 178 LLHPGPDSSDDLALAFDWFGNSSSSIQKDPVEPFTLYGS---VFKKYLIENIVEGKVVSR 348
                P +  D+AL  D  G +    Q D V+ F   GS   V      + +V    ++R
Sbjct: 167 -----PGTPHDMALVED--GWTLRGYQNDAVDHFLDGGSGVVVLPCGAGKTLVGAAAMAR 219

Query: 349 RKGFTSTACVNALDADKETPELQGILAGLKVIIIGEPKCAKSEGQSRE 492
            K  T     N + A +   EL      LK   + E +  +  GQSRE
Sbjct: 220 AKTTTLILVTNTVSARQWRSEL------LKRTTLTEDEIGEYSGQSRE 261