DK950184
Clone id TST38A01NGRL0007_P19
Library
Length 634
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0007_P19. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CACGAATCTAGCCGGATTCTGCTGGCAGAGGGGAAATACAGATGGTTGCTTGAAGTGGGG
GACAGAGCTTTTGGCTGATGAGTGGAGGGAGCTGATTTGAATAAGCAGAAATGAGAGGGG
CATCACCACCACCACCACGCCATTGATGCATACATGCAGAATCAATTCTGGGATACAGCT
GTTGAAGGATACTCAGCTTAGCAAAAATCATCTGCTATCGCGCCTTGCCCAAAAGCTTTT
AAGTAATTTTGCAGACAGAAGCTGGCTCGCTCATACCCCATGCACAGTATTCATACCTTG
GCTTATTTGAGAAGCAGCACAGATGCGAGATTGGCATATAGTCGTGTATCCGCTCGGCTC
TACTGTTGTAGAGTGGCCCACATCCTGTATAAAGTAACGTTTTTGCACCTATAGACAACC
ATGGGAATTGCTTACAGTTGCCGACACAATGCGCAACAAGAGCTCTTTGCAGTTATCCGG
GAGGGCGACCTGCAGCAGGTGATGGCGATCTTGAACAAGCATCCCAAGCTTCTCGATCGT
GCCCTTTCACGCAGGACCCGCCTTTCAGCCCTGCACTATACTGCCTCTCATGGACAAGCT
GATGTGCTTCTGCTGCTGTTGGCAAAAGGTGCAT
■■Homology search results ■■ -
sp_hit_id Q11094
Definition sp|Q11094|TWIST_CAEEL Twist-related protein OS=Caenorhabditis elegans
Align length 48
Score (bit) 33.5
E-value 0.94
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950184|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_P19, 5'
(634 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q11094|TWIST_CAEEL Twist-related protein OS=Caenorhabditis el... 33 0.94
sp|Q7T2B9|MTPN_DANRE Myotrophin OS=Danio rerio GN=mtpn PE=2 SV=1 32 2.7
sp|Q9H2K2|TNKS2_HUMAN Tankyrase-2 OS=Homo sapiens GN=TNKS2 PE=1 ... 30 8.0

>sp|Q11094|TWIST_CAEEL Twist-related protein OS=Caenorhabditis
elegans GN=hlh-8 PE=1 SV=2
Length = 178

Score = 33.5 bits (75), Expect = 0.94
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -1

Query: 157 ACMHQWRGGGGDAPLISAYSNQLPPLISQKLCPPLQATI---CISPLP 23
+ + WRG G P+ A +QLPPL S + PP ++I C+ P P
Sbjct: 97 SAFNMWRGNNGYTPI--AGPSQLPPLQSAHIPPPAPSSIPPHCLMPQP 142


>sp|Q7T2B9|MTPN_DANRE Myotrophin OS=Danio rerio GN=mtpn PE=2 SV=1
Length = 118

Score = 32.0 bits (71), Expect = 2.7
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +1

Query: 457 QELFAVIREGDLQQVMAILNKHPKXXXXXXXXXXXXXXXHYTASHGQADVLLLLLAKGA 633
+EL ++ GDL +V IL K HY A GQA++L LL+KGA
Sbjct: 4 KELMWALKNGDLDEVKNIL---VKAEDVNRTLEGGRKPLHYAADCGQAEMLEFLLSKGA 59


>sp|Q9H2K2|TNKS2_HUMAN Tankyrase-2 OS=Homo sapiens GN=TNKS2 PE=1
SV=1
Length = 1166

Score = 30.4 bits (67), Expect = 8.0
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1

Query: 451 AQQELFAVIREGDLQQVMAILNKHPKXXXXXXXXXXXXXXXHYTASHGQADVLLLLLAKG 630
A +ELF R GD+++V ++ P+ H+ A G+ DV+ LL G
Sbjct: 24 AARELFEACRNGDVERVKRLVT--PEKVNSRDTAGRKSTPLHFAAGFGRKDVVEYLLQNG 81

Query: 631 A 633
A
Sbjct: 82 A 82


tr_hit_id Q6AL37
Definition tr|Q6AL37|Q6AL37_DESPS Probable NADH dehydrogenase (Ubiquinone) I, chain F OS=Desulfotalea psychrophila
Align length 66
Score (bit) 38.9
E-value 0.26
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950184|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0007_P19, 5'
(634 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6AL37|Q6AL37_DESPS Probable NADH dehydrogenase (Ubiquinone) ... 39 0.26
tr|Q966Y6|Q966Y6_SUBDO Myol protein OS=Suberites domuncula GN=my... 36 1.7
tr|A8X0Q6|A8X0Q6_CAEBR CBR-TRPA-1 protein OS=Caenorhabditis brig... 35 2.9
tr|A7PFF7|A7PFF7_VITVI Chromosome chr11 scaffold_14, whole genom... 34 6.5
tr|A5BJG3|A5BJG3_VITVI Putative uncharacterized protein OS=Vitis... 34 6.5
tr|B4GVY3|B4GVY3_DROPE GL14740 (Fragment) OS=Drosophila persimil... 34 8.3
tr|Q7EZ44|Q7EZ44_ORYSJ Os08g0258200 protein OS=Oryza sativa subs... 34 8.4
tr|A2YT41|A2YT41_ORYSI Putative uncharacterized protein OS=Oryza... 34 8.4

>tr|Q6AL37|Q6AL37_DESPS Probable NADH dehydrogenase (Ubiquinone) I,
chain F OS=Desulfotalea psychrophila GN=DP2209 PE=4 SV=1
Length = 550

Score = 38.9 bits (89), Expect = 0.26
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Frame = -1

Query: 448 CVGNCKQFPWLSIGAKTLLYTGCGPLYNSRAERIHDYM---PISHLCC-----FSNKPR- 296
C+G C P +++ +K +LY GCGP + E I D + P HL C F NK R
Sbjct: 66 CLGLCSAGPLVALASKNVLYQGCGP---ADVETILDALGGAPAKHLLCSSDIPFFNKQRK 122

Query: 295 --YEYC 284
EYC
Sbjct: 123 VVLEYC 128


>tr|Q966Y6|Q966Y6_SUBDO Myol protein OS=Suberites domuncula GN=myol
PE=4 SV=1
Length = 120

Score = 36.2 bits (82), Expect = 1.7
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1

Query: 457 QELFAVIREGDLQQVMAILNKHPKXXXXXXXXXXXXXXXHYTASHGQADVLLLLLAKGA 633
++L ++ GDL ++ AI+ K HY + +GQADV+L L++KGA
Sbjct: 5 EKLLWAVKNGDLVEIKAIVEK--PGFNVNSELLNGRNPLHYASDYGQADVILYLISKGA 61


>tr|A8X0Q6|A8X0Q6_CAEBR CBR-TRPA-1 protein OS=Caenorhabditis
briggsae GN=Cbr-trpa-1 PE=4 SV=2
Length = 1203

Score = 35.4 bits (80), Expect = 2.9
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1

Query: 448 NAQQELFAVIREGDLQQVMAILNKHPKXXXXXXXXXXXXXXXHYTASHGQADVLLLLLAK 627
N + ++ REG+++Q+ IL+KHP+ HY A +G +++ LL++
Sbjct: 46 NVRSQILKFAREGNVEQLRIILDKHPE-MVNLPDDKDGMTALHYGARYGNFEIVKHLLSR 104

Query: 628 GA 633
GA
Sbjct: 105 GA 106


>tr|A7PFF7|A7PFF7_VITVI Chromosome chr11 scaffold_14, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00017060001
PE=4 SV=1
Length = 509

Score = 34.3 bits (77), Expect = 6.5
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +1

Query: 421 MGIAYSCRHNAQQELFAVIREGDLQQVMAILNKHPKXXXXXXXXXXXXXXXHYTASHGQA 600
+G ++ C + ++ L + R+GDLQ+ A+L +P+ HY+A+ G
Sbjct: 7 VGNSFGCSASGER-LVSAARDGDLQEAKALLEYNPR-LARYSTFGVRNSPLHYSAAQGHH 64

Query: 601 DVLLLLLAKG 630
+++ LLL G
Sbjct: 65 EIVSLLLVSG 74


>tr|A5BJG3|A5BJG3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_014614 PE=4 SV=1
Length = 511

Score = 34.3 bits (77), Expect = 6.5
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +1

Query: 421 MGIAYSCRHNAQQELFAVIREGDLQQVMAILNKHPKXXXXXXXXXXXXXXXHYTASHGQA 600
+G ++ C + ++ L + R+GDLQ+ A+L +P+ HY+A+ G
Sbjct: 7 VGNSFGCSASGER-LVSAARDGDLQEAKALLEYNPR-LARYSTFGVRNSPLHYSAAQGHH 64

Query: 601 DVLLLLLAKG 630
+++ LLL G
Sbjct: 65 EIVSLLLVSG 74


>tr|B4GVY3|B4GVY3_DROPE GL14740 (Fragment) OS=Drosophila persimilis
GN=GL14740 PE=4 SV=1
Length = 1417

Score = 33.9 bits (76), Expect = 8.3
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3

Query: 447 QCATRALCSYPGGRPAAGDG-DLEQASQASRSCPFTQDPPFSPALY 581
QC + C G R +AG G DL +ASQ S PFT PF P+ Y
Sbjct: 106 QCDNESECESSGVRTSAGWGQDLHEASQGSFITPFTL--PFEPSSY 149


>tr|Q7EZ44|Q7EZ44_ORYSJ Os08g0258200 protein OS=Oryza sativa subsp.
japonica GN=B1015H11.105 PE=2 SV=1
Length = 495

Score = 33.9 bits (76), Expect = 8.4
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +1

Query: 421 MGIAYSCRHNAQQELFAVIREGDLQQVMAILNKHPKXXXXXXXXXXXXXXXHYTASHGQA 600
+G ++ C ++ L + R+GD+Q+ MA+L +P+ HY+A+ G
Sbjct: 7 VGDSFGCSATGER-LVSAARDGDIQEAMALLELNPR-LARYSTFGIRNSPLHYSAAKGHH 64

Query: 601 DVLLLLLAKG 630
+++ LL+ G
Sbjct: 65 EIVSLLIESG 74


>tr|A2YT41|A2YT41_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_28489 PE=4 SV=1
Length = 495

Score = 33.9 bits (76), Expect = 8.4
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +1

Query: 421 MGIAYSCRHNAQQELFAVIREGDLQQVMAILNKHPKXXXXXXXXXXXXXXXHYTASHGQA 600
+G ++ C ++ L + R+GD+Q+ MA+L +P+ HY+A+ G
Sbjct: 7 VGDSFGCSATGER-LVSAARDGDIQEAMALLELNPR-LARYSTFGIRNSPLHYSAAKGHH 64

Query: 601 DVLLLLLAKG 630
+++ LL+ G
Sbjct: 65 EIVSLLIESG 74