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NBDC - LSDB Archive
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DK950190
Clone id TST38A01NGRL0008_A01
Library
Length 654
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_A01. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
ACTGAATAAATCCGATTTGTTTGTCAGTAAAGCTTGGGTAGATAACTCCAAATACCTCCG
AAGATTTCGTCCACGAGCTCAGGGGCGCGGTTACCCCATAAAAAAACCCACGTGTAAAGT
AACTATTCAATTGAGCTCAAAGTCTATTGAGAAGTGAATAAACAAGTGATCGCATATGAA
TGAAAACAAATTTAGTAGCAAGAAAGAGCTACAAGAGAATAATTTCCTATCAAGTTGAGG
AGACACACATATGGGACGAAAGATTCATCCACTTGGTTTTCGACTCGGTGTAAGTTAGAA
GCATTATTCTTATCGGTTCGCCCAGAAGAAGGATTATCCAAAGTTTCTTGAAGAGGATAG
AAAGATACGCAATCTCCTCGAAAAATATATTCAAAAACATGTAAAAAGTGTTTCCAACTA
CGGCGGAGTTGGGCATATTGAAATCCAGCGAAAAACAGATCTTATTCAAATTAATATATA
TACTGGATTTCCTGATTTACTAATTGAGGAACAGAGTTTGGGAATTAGTCAAATGAAGCA
GGATCTGAGAAACCTTTTAGGGCTCGAAAGTCAGAATCTCCGAGTAACATTAACTGGTGT
TATCCAACCCTATGGAGAACCGAAGATTTTGGCAGAACATGTTGCCTCACAACT
■■Homology search results ■■ -
sp_hit_id Q85FI4
Definition sp|Q85FI4|RR3_ADICA 30S ribosomal protein S3, chloroplastic OS=Adiantum capillus-veneris
Align length 134
Score (bit) 261.0
E-value 2.0e-69
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950190|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_A01, 5'
         (654 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q85FI4|RR3_ADICA 30S ribosomal protein S3, chloroplastic OS=A...   261   2e-69
sp|A2T372|RR3_ANGEV 30S ribosomal protein S3, chloroplastic OS=A...   180   5e-45
sp|Q6YXK8|RR3_PHYPA 30S ribosomal protein S3, chloroplastic OS=P...   164   5e-40
sp|P06356|RR3_MARPO 30S ribosomal protein S3, chloroplastic OS=M...   161   2e-39
sp|Q85CS9|RR3_ANTFO 30S ribosomal protein S3, chloroplastic OS=A...   159   2e-38
sp|Q5SD19|RR3_HUPLU 30S ribosomal protein S3, chloroplastic OS=H...   154   5e-37
sp|Q4FG73|RR3_GINBI 30S ribosomal protein S3, chloroplastic OS=G...   152   1e-36
sp|A6H5M0|RR3_CYCTA 30S ribosomal protein S3, chloroplastic OS=C...   142   2e-33
sp|Q1ACF9|RR3_CHAVU 30S ribosomal protein S3, chloroplastic OS=C...   140   4e-33
sp|Q8WHY4|RR3_PSINU 30S ribosomal protein S3, chloroplastic OS=P...   139   2e-32
sp|O98455|RR3_SPIMX 30S ribosomal protein S3, chloroplastic OS=S...   137   4e-32
sp|Q85WZ0|RR3_PINKO 30S ribosomal protein S3, chloroplastic OS=P...   136   1e-31
sp|P41635|RR3_PINTH 30S ribosomal protein S3, chloroplastic OS=P...   134   3e-31
sp|O62951|RR3_PICAB 30S ribosomal protein S3, chloroplastic OS=P...   133   7e-31
sp|Q68RW8|RR3_PANGI 30S ribosomal protein S3, chloroplastic OS=P...   131   3e-30
sp|A4QLE4|RR3_LEPVR 30S ribosomal protein S3, chloroplastic OS=L...   131   3e-30
sp|P09595|RR3_SPIOL 30S ribosomal protein S3, chloroplastic OS=S...   131   4e-30
sp|Q1KXS0|RR3_HELAN 30S ribosomal protein S3, chloroplastic OS=H...   131   4e-30
sp|A4QKE3|RR3_BARVE 30S ribosomal protein S3, chloroplastic OS=B...   130   8e-30
sp|A4QJW9|RR3_OLIPU 30S ribosomal protein S3, chloroplastic OS=O...   129   1e-29
sp|A4QLX1|RR3_NASOF 30S ribosomal protein S3, chloroplastic OS=N...   129   1e-29
sp|A4QKW9|RR3_CRUWA 30S ribosomal protein S3, chloroplastic OS=C...   129   1e-29
sp|A4QKN0|RR3_CAPBU 30S ribosomal protein S3, chloroplastic OS=C...   129   1e-29
sp|P56798|RR3_ARATH 30S ribosomal protein S3, chloroplastic OS=A...   129   1e-29
sp|A4QK56|RR3_ARAHI 30S ribosomal protein S3, chloroplastic OS=A...   129   1e-29
sp|A8SEE2|RR3_CERDE 30S ribosomal protein S3, chloroplastic OS=C...   129   1e-29
sp|Q332T8|RR3_LACSA 30S ribosomal protein S3, chloroplastic OS=L...   129   2e-29
sp|Q0G9S3|RR3_DAUCA 30S ribosomal protein S3, chloroplastic OS=D...   129   2e-29
sp|Q70XX2|RR3_AMBTC 30S ribosomal protein S3, chloroplastic OS=A...   128   2e-29
sp|Q06GV8|RR3_DRIGR 30S ribosomal protein S3, chloroplastic OS=D...   128   3e-29

>sp|Q85FI4|RR3_ADICA 30S ribosomal protein S3, chloroplastic
           OS=Adiantum capillus-veneris GN=rps3 PE=2 SV=2
          Length = 217

 Score =  261 bits (668), Expect = 2e-69
 Identities = 131/134 (97%), Positives = 132/134 (98%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MGRKIHPLGFRLGVS KHYSY FAQKKDYPKFLEEDRKIRNL+EKYIQKHVKSVSNYGGV
Sbjct: 1   MGRKIHPLGFRLGVSQKHYSYWFAQKKDYPKFLEEDRKIRNLVEKYIQKHVKSVSNYGGV 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
           GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP
Sbjct: 61  GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 120

Query: 611 YGEPKILAEHVASQ 652
           YGEPKILAEHVASQ
Sbjct: 121 YGEPKILAEHVASQ 134


>sp|A2T372|RR3_ANGEV 30S ribosomal protein S3, chloroplastic
           OS=Angiopteris evecta GN=rps3 PE=3 SV=1
          Length = 218

 Score =  180 bits (457), Expect = 5e-45
 Identities = 82/134 (61%), Positives = 109/134 (81%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+KI+PLGFR+GV+ +HYSY FAQ K+Y KFLEED K+R  +EKY+QK +K+ SNYGG+
Sbjct: 1   MGQKINPLGFRVGVTQQHYSYWFAQPKNYSKFLEEDEKVRTCIEKYVQKQIKNSSNYGGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
             IEI+ KTDL+QI IYTGFPD L+EE  LGI +++ ++ NLL  +SQ +++TL  V+QP
Sbjct: 61  ARIEIEGKTDLLQIEIYTGFPDSLVEENGLGIDKLRTNIENLLKKKSQKIQITLKNVLQP 120

Query: 611 YGEPKILAEHVASQ 652
           YGEP+ILAEH+A Q
Sbjct: 121 YGEPRILAEHIALQ 134


>sp|Q6YXK8|RR3_PHYPA 30S ribosomal protein S3, chloroplastic
           OS=Physcomitrella patens GN=rps3 PE=3 SV=1
          Length = 218

 Score =  164 bits (414), Expect = 5e-40
 Identities = 76/134 (56%), Positives = 106/134 (79%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+KI+PLGFRLGV+  H+SY FAQ K+Y K L+ED+K+RN +E Y+ K++++ SNYGG+
Sbjct: 1   MGQKINPLGFRLGVTQNHHSYWFAQPKNYSKLLQEDQKMRNCIENYVYKNIRNSSNYGGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
             IEI+RKTDLIQ+ I+TGFP LL+E +  GI Q+K D++++L    + LR+TLT V +P
Sbjct: 61  ARIEIKRKTDLIQVEIHTGFPALLVENRKRGIEQLKTDVQSILTSGDRKLRMTLTEVTKP 120

Query: 611 YGEPKILAEHVASQ 652
           YGEP ILAE++A Q
Sbjct: 121 YGEPNILAEYIALQ 134


>sp|P06356|RR3_MARPO 30S ribosomal protein S3, chloroplastic
           OS=Marchantia polymorpha GN=rps3 PE=3 SV=1
          Length = 217

 Score =  161 bits (408), Expect = 2e-39
 Identities = 76/132 (57%), Positives = 103/132 (78%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+KI+PLGFRLG++  H SY FA KK Y K  EED+KIR+ +E Y+QKH+K+ SNYGG+
Sbjct: 1   MGQKINPLGFRLGITQNHRSYWFANKK-YSKVFEEDKKIRDCIELYVQKHIKNSSNYGGI 59

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
             +EI+RKTDLIQ+ IYTGFP LL+E +  GI Q+K +++N+L  E + LR+TL  + +P
Sbjct: 60  ARVEIKRKTDLIQVEIYTGFPALLVESRGQGIEQLKLNVQNILSSEDRRLRMTLIEIAKP 119

Query: 611 YGEPKILAEHVA 646
           YGEPKILA+ +A
Sbjct: 120 YGEPKILAKKIA 131


>sp|Q85CS9|RR3_ANTFO 30S ribosomal protein S3, chloroplastic
           OS=Anthoceros formosae GN=rps3 PE=2 SV=1
          Length = 218

 Score =  159 bits (401), Expect = 2e-38
 Identities = 76/134 (56%), Positives = 102/134 (76%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+KI+PLGFRLGV+  H S+ FA+  +Y K LEED K+RN +  Y++KH+KS SNYGG+
Sbjct: 1   MGQKINPLGFRLGVTQNHCSHWFAKPNNYYKLLEEDEKMRNCIYNYVRKHIKSSSNYGGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
             IEI+RKTDLIQI IYTGFP LL+E +  GI ++K D++ +L L ++ LR+ LT V +P
Sbjct: 61  ARIEIERKTDLIQIEIYTGFPALLVESRGRGIEELKADVQTVLNLGNRKLRMALTEVEEP 120

Query: 611 YGEPKILAEHVASQ 652
           Y EP ILAE++A Q
Sbjct: 121 YTEPNILAEYIALQ 134


>sp|Q5SD19|RR3_HUPLU 30S ribosomal protein S3, chloroplastic
           OS=Huperzia lucidula GN=rps3 PE=3 SV=1
          Length = 219

 Score =  154 bits (388), Expect = 5e-37
 Identities = 72/135 (53%), Positives = 103/135 (76%), Gaps = 1/135 (0%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+KI+PLGFRLG++  H S+ FA+  +Y +FL+EDRK+RN ++ Y+ +HVK+ SNYGGV
Sbjct: 1   MGQKINPLGFRLGITKNHNSHWFAKPNNYSEFLQEDRKVRNCIDNYVHRHVKNSSNYGGV 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDL-RNLLGLESQNLRVTLTGVIQ 607
             +EIQRKTDLI + I+TGFP LL+E    GI Q+++D+ +NLL  + + + VT T + +
Sbjct: 61  ARVEIQRKTDLILVEIHTGFPALLVESHGQGIEQIRKDVQQNLLDSKIRRVHVTSTEIAK 120

Query: 608 PYGEPKILAEHVASQ 652
           PYGEP ILAE++A Q
Sbjct: 121 PYGEPNILAEYIAIQ 135


>sp|Q4FG73|RR3_GINBI 30S ribosomal protein S3, chloroplastic
           OS=Ginkgo biloba GN=rps3 PE=3 SV=1
          Length = 218

 Score =  152 bits (385), Expect = 1e-36
 Identities = 69/134 (51%), Positives = 103/134 (76%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG++I+PLGFRLGV+  H S+ FAQKK Y + L+ED +IRN +E Y+++H+K+ SNYGG+
Sbjct: 1   MGQRINPLGFRLGVTQNHRSHWFAQKKYYSEDLQEDEEIRNCIENYVRRHMKNYSNYGGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
             +EI+RK DLIQ+ I+ GFP+LLIE++  GI Q++ D+RN+L   ++ L +++  V +P
Sbjct: 61  ARVEIRRKIDLIQVEIHIGFPNLLIEDRGRGIEQLRTDVRNMLNSANRKLNISIAKVAKP 120

Query: 611 YGEPKILAEHVASQ 652
           YG P ILAE++A Q
Sbjct: 121 YGVPNILAEYIALQ 134


>sp|A6H5M0|RR3_CYCTA 30S ribosomal protein S3, chloroplastic
           OS=Cycas taitungensis GN=rps3 PE=3 SV=1
          Length = 218

 Score =  142 bits (357), Expect = 2e-33
 Identities = 66/134 (49%), Positives = 96/134 (71%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+K++PLGFRLG++  H S+ FAQ+K+Y + L ED KI N +  YI++H++S SN+GG+
Sbjct: 1   MGQKMNPLGFRLGITQNHRSHWFAQQKNYSEDLREDEKISNCIVNYIRRHMRSSSNHGGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
             +EI+RK DLIQ+ I+ GFP+LLIE +  G  Q++ D+RN+L      L + +  V +P
Sbjct: 61  ARVEIRRKIDLIQVEIHIGFPNLLIENRGRGSEQLRTDVRNMLNPVDGKLNIAIVKVAKP 120

Query: 611 YGEPKILAEHVASQ 652
           YGEP ILAE +A Q
Sbjct: 121 YGEPNILAEFIALQ 134


>sp|Q1ACF9|RR3_CHAVU 30S ribosomal protein S3, chloroplastic
           OS=Chara vulgaris GN=rps3 PE=3 SV=1
          Length = 219

 Score =  140 bits (354), Expect = 4e-33
 Identities = 64/134 (47%), Positives = 98/134 (73%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+KIHPLGFRLG   +HYS+ FA+   Y + L+ED++IR+ +  +I+ HV++ SNYGG+
Sbjct: 1   MGQKIHPLGFRLGFIQEHYSHWFAKANSYSELLQEDKEIRSCIYNHIRNHVRNSSNYGGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
             I I R+TDL+Q+ I+TGFP LLIE +  G+  +++D++  +  + + LR+TL  V++P
Sbjct: 61  ARINIYRRTDLVQLQIHTGFPALLIENRIRGLEHLRRDIQEKIDHKKRKLRMTLVEVLKP 120

Query: 611 YGEPKILAEHVASQ 652
           Y EP ILAE++A Q
Sbjct: 121 YTEPTILAEYIALQ 134


>sp|Q8WHY4|RR3_PSINU 30S ribosomal protein S3, chloroplastic
           OS=Psilotum nudum GN=rps3 PE=3 SV=1
          Length = 220

 Score =  139 bits (349), Expect = 2e-32
 Identities = 67/135 (49%), Positives = 95/135 (70%), Gaps = 1/135 (0%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQ-KKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGG 427
           MG+KIHPLGFRLG +  H SY FAQ KK Y K ++ED++IRN +EKY+QKH  +  +YGG
Sbjct: 1   MGQKIHPLGFRLGTTQNHCSYWFAQSKKIYSKLVKEDKEIRNCIEKYVQKHTNNPFHYGG 60

Query: 428 VGHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQ 607
           +  IEI RKTDLI++ I+ GF DLL E   +   Q+K ++  ++  ++Q L + L  + +
Sbjct: 61  IARIEIYRKTDLIRVEIHMGFTDLLTENGGIRFEQLKSNIEKIVNSKNQKLCLILIKIDK 120

Query: 608 PYGEPKILAEHVASQ 652
           PY EPK+LAE++A Q
Sbjct: 121 PYTEPKVLAEYIALQ 135
tr_hit_id A9QB16
Definition tr|A9QB16|A9QB16_9SPER Chloroplast 30S ribosomal protein S3 (Fragment) OS=Cycas micronesica
Align length 134
Score (bit) 147.0
E-value 4.0e-34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950190|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_A01, 5'
         (654 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9QB16|A9QB16_9SPER Chloroplast 30S ribosomal protein S3 (Fra...   147   4e-34
tr|B0YPR4|B0YPR4_ANEMR Chloroplast 30S ribosomal protein S3 OS=A...   140   7e-32
tr|B7ZIS5|B7ZIS5_KETDA Ribosomal protein S3 OS=Keteleeria davidi...   134   4e-30
tr|B8LKH3|B8LKH3_PICSI Putative uncharacterized protein OS=Picea...   133   8e-30
tr|A9L9D4|A9L9D4_LEMMI Chloroplast 30S ribosomal protein S3 OS=L...   133   1e-29
tr|B2LMN2|B2LMN2_GUIAB Ribosomal protein S3 OS=Guizotia abyssini...   130   5e-29
tr|A9QAT9|A9QAT9_9APIA Chloroplast 30S ribosomal protein S3 (Fra...   130   5e-29
tr|B2XWR2|B2XWR2_FAGEA Ribosomal protein S3 OS=Fagopyrum esculen...   129   2e-28
tr|A9QBI5|A9QBI5_MUSAC Chloroplast 30S ribosomal protein S3 (Fra...   129   2e-28
tr|B3TLZ9|B3TLZ9_ELAGV Ribosomal protein S3 OS=Elaeis guineensis...   127   5e-28
tr|A9QB93|A9QB93_ELAOL Chloroplast 30S ribosomal protein S3 (Fra...   127   5e-28
tr|A5CB43|A5CB43_VITVI Putative uncharacterized protein OS=Vitis...   127   5e-28
tr|Q4FG70|Q4FG70_TYPLA Chloroplast 30S ribosomal protein S3 (Fra...   127   8e-28
tr|Q4FG74|Q4FG74_ACOAM Chloroplast 30S ribosomal protein S3 (Fra...   125   2e-27
tr|B1A973|B1A973_CARPA Chloroplast 30S ribosomal protein S3 OS=C...   125   3e-27
tr|B0Z5G6|B0Z5G6_OENPA Chloroplast 30S ribosomal protein S3 OS=O...   125   3e-27
tr|B0Z4R4|B0Z4R4_OENAR Chloroplast 30S ribosomal protein S3 OS=O...   125   3e-27
tr|Q4FG69|Q4FG69_9ASPA Chloroplast 30S ribosomal protein S3 (Fra...   124   4e-27
tr|B0Z4Z8|B0Z4Z8_OENBI Chloroplast 30S ribosomal protein S3 OS=O...   124   5e-27
tr|B5AH36|B5AH36_9ROSI Ribosomal protein S3 OS=Gonystylus bancan...   123   9e-27
tr|B0Z582|B0Z582_OENGL Chloroplast 30S ribosomal protein S3 OS=O...   123   1e-26
tr|B1NWI8|B1NWI8_MANES Chloroplast 30S ribosomal protein S3 OS=M...   122   2e-26
tr|Q85UK5|Q85UK5_OROMI Chloroplast 30S ribosomal protein S3 (Fra...   116   1e-24
tr|A6BM53|A6BM53_GNEPA Chloroplast 30S ribosomal protein S3 OS=G...   116   1e-24
tr|B5LMR1|B5LMR1_CICAR Ribosomal protein S3 OS=Cicer arietinum G...   111   3e-23
tr|B7ZIJ3|B7ZIJ3_EPHEU Ribosomal protein S3 OS=Ephedra equisetin...   108   2e-22
tr|B3TN88|B3TN88_BRADI Ribosomal protein S3 OS=Brachypodium dist...   107   8e-22
tr|B2Y1Z8|B2Y1Z8_WELMI Ribosomal protein S3 OS=Welwitschia mirab...   105   3e-21
tr|B8B5K8|B8B5K8_ORYSI Putative uncharacterized protein OS=Oryza...   104   4e-21
tr|B1VKD4|B1VKD4_CRYJA Ribosomal protein S3 OS=Cryptomeria japon...   104   4e-21

>tr|A9QB16|A9QB16_9SPER Chloroplast 30S ribosomal protein S3
           (Fragment) OS=Cycas micronesica GN=rps3 PE=3 SV=1
          Length = 218

 Score =  147 bits (372), Expect = 4e-34
 Identities = 68/134 (50%), Positives = 99/134 (73%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+K++PLGFRLG++  H S+ FAQ+K+Y + L ED KIRN +  YI++H++S SN+GG+
Sbjct: 1   MGQKMNPLGFRLGITQNHRSHWFAQQKNYSEDLREDEKIRNCIVNYIRRHMRSSSNHGGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
             +EI+RK DLIQ+ I+ GFP+LLIE +  GI Q++ D+RN+L    + L + +  V +P
Sbjct: 61  ARVEIRRKIDLIQVEIHIGFPNLLIENRGRGIEQLRTDVRNMLNPVDRKLNIAIVKVAKP 120

Query: 611 YGEPKILAEHVASQ 652
           YGEP ILAE +A Q
Sbjct: 121 YGEPNILAEFIALQ 134


>tr|B0YPR4|B0YPR4_ANEMR Chloroplast 30S ribosomal protein S3
           OS=Aneura mirabilis GN=rps3 PE=3 SV=1
          Length = 218

 Score =  140 bits (353), Expect = 7e-32
 Identities = 64/134 (47%), Positives = 100/134 (74%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+KI+PLGFRLG++  H SY FA+  +Y    E D +IRN ++ Y+++H+++ SNYGG+
Sbjct: 1   MGQKINPLGFRLGITQNHRSYWFAEPNEYSGLCEGDERIRNCIKSYVREHIRNSSNYGGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
            HI I+RKTDLI+I I+TGFP LL+E ++ G+ Q+K ++++ L   ++ L ++L  + +P
Sbjct: 61  THIGIERKTDLIRIEIHTGFPALLVENRNRGMDQLKINVQSTLDPVNKRLGLSLVEIPKP 120

Query: 611 YGEPKILAEHVASQ 652
           YGEP ILAE++A Q
Sbjct: 121 YGEPNILAEYIALQ 134


>tr|B7ZIS5|B7ZIS5_KETDA Ribosomal protein S3 OS=Keteleeria davidiana
           GN=rps3 PE=4 SV=1
          Length = 217

 Score =  134 bits (338), Expect = 4e-30
 Identities = 66/135 (48%), Positives = 95/135 (70%), Gaps = 1/135 (0%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           M +KI+PLGFRLGV+    S+ FAQ+++Y K L ED+KIR  +E Y++ H+KS SNYGG+
Sbjct: 1   MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHMKSSSNYGGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPD-LLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQ 607
             +EI RK DLIQ+ IY GFP+ LLIE +  GI +++ D+ N+L    + L + +  V +
Sbjct: 61  ARVEISRKIDLIQVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120

Query: 608 PYGEPKILAEHVASQ 652
           PY +P ILAE++A Q
Sbjct: 121 PYRKPNILAEYIALQ 135


>tr|B8LKH3|B8LKH3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 218

 Score =  133 bits (335), Expect = 8e-30
 Identities = 66/136 (48%), Positives = 94/136 (69%), Gaps = 2/136 (1%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           M +KI+PLGFRLGV+    S+ FAQ+++Y K L ED+KIR  +E Y++ H+KS SNYGG+
Sbjct: 1   MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQS--LGISQMKQDLRNLLGLESQNLRVTLTGVI 604
             +EI RK DLIQ+ IY GFP+LL+ E     GI ++K D+ N+L    + L + +  V 
Sbjct: 61  ARVEISRKIDLIQVKIYIGFPNLLLIEGRGFQGIEKLKNDVLNMLDSVDRKLHIAIEKVA 120

Query: 605 QPYGEPKILAEHVASQ 652
           +PY +P ILAE++A Q
Sbjct: 121 KPYRKPNILAEYIALQ 136


>tr|A9L9D4|A9L9D4_LEMMI Chloroplast 30S ribosomal protein S3
           OS=Lemna minor GN=rps3 PE=3 SV=1
          Length = 218

 Score =  133 bits (334), Expect = 1e-29
 Identities = 62/134 (46%), Positives = 97/134 (72%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+KI+PLGFRLG +  HYS+ FAQ K +   L+ED KIR+ ++ Y+QK++K+ S + G+
Sbjct: 1   MGQKINPLGFRLGTTQNHYSFWFAQPKSFSMGLQEDEKIRDCIKNYVQKNMKTSSGFEGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
             IEIQ++ DLIQ+ I+ GFP+LLIE +  GI +++ +++  L   ++ L + +T V +P
Sbjct: 61  ARIEIQKRIDLIQVIIHIGFPNLLIEGRRRGIEELQTNVQKELNSANRRLNIAITRVEKP 120

Query: 611 YGEPKILAEHVASQ 652
           YG+P ILAE++A Q
Sbjct: 121 YGQPNILAEYIALQ 134


>tr|B2LMN2|B2LMN2_GUIAB Ribosomal protein S3 OS=Guizotia abyssinica
           GN=rps3 PE=4 SV=1
          Length = 218

 Score =  130 bits (328), Expect = 5e-29
 Identities = 62/134 (46%), Positives = 94/134 (70%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+KI+P+GFRLG +  H+S  FAQ K+Y + L+ED+KIRN ++ Y+QK++K+ S   G+
Sbjct: 1   MGQKINPIGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRNYIKNYVQKNMKTSSGVEGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
             IEIQ++ DLIQI IY GFP +LIE +  GI +++ +L+      ++ L + +T + +P
Sbjct: 61  ARIEIQKRIDLIQIIIYMGFPKILIESRPRGIEELQMNLQKEFHSANRKLNIAITRIEKP 120

Query: 611 YGEPKILAEHVASQ 652
           YG P ILAE +A Q
Sbjct: 121 YGNPNILAEFIAGQ 134


>tr|A9QAT9|A9QAT9_9APIA Chloroplast 30S ribosomal protein S3
           (Fragment) OS=Anethum graveolens GN=rps3 PE=3 SV=1
          Length = 218

 Score =  130 bits (328), Expect = 5e-29
 Identities = 62/134 (46%), Positives = 93/134 (69%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+KI+PLGFRLG +  H+S  F Q K+Y + L+ED+KIR+ ++ Y+QK++K  S   G+
Sbjct: 1   MGQKINPLGFRLGTTQSHHSLWFKQPKNYSEGLQEDQKIRDFIKNYVQKNMKISSGVEGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
             IEIQ++ DLIQ+ IY GFP LLIE +  GI +++ +L+      ++ L +T+T + +P
Sbjct: 61  ARIEIQKRIDLIQVIIYMGFPKLLIENRPGGIEELQMNLQKEFNCVNRKLNITITRIAKP 120

Query: 611 YGEPKILAEHVASQ 652
           YG P ILAE +A Q
Sbjct: 121 YGSPNILAEFIAGQ 134


>tr|B2XWR2|B2XWR2_FAGEA Ribosomal protein S3 OS=Fagopyrum esculentum
           subsp. ancestrale GN=rps3 PE=4 SV=1
          Length = 218

 Score =  129 bits (323), Expect = 2e-28
 Identities = 62/134 (46%), Positives = 92/134 (68%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+KI+PLGFRLG S  HYS  FAQ K+Y + L ED+KIR+ ++ Y Q++V++ S   G+
Sbjct: 1   MGQKINPLGFRLGTSQSHYSIWFAQPKNYSEGLHEDQKIRDCIKNYAQQNVRASSGVEGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
             IEIQ++ DLIQ+ IY GFP LLIE +  GI +++ +++  L   ++ L + +T + +P
Sbjct: 61  ARIEIQKRIDLIQVIIYMGFPKLLIENRPRGIEELQMNVQKKLNSVNRKLNIAITRIAKP 120

Query: 611 YGEPKILAEHVASQ 652
           Y  P ILAE +A Q
Sbjct: 121 YRHPNILAEFIAGQ 134


>tr|A9QBI5|A9QBI5_MUSAC Chloroplast 30S ribosomal protein S3
           (Fragment) OS=Musa acuminata GN=rps3 PE=3 SV=1
          Length = 218

 Score =  129 bits (323), Expect = 2e-28
 Identities = 61/134 (45%), Positives = 95/134 (70%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+KI+PLGFRLG + +H+S+ FAQ K+Y   L+ED KIRN ++ Y+QK+ +  S + G+
Sbjct: 1   MGQKINPLGFRLGTTQRHHSFWFAQPKNYSVGLQEDEKIRNCIKNYVQKNRRISSGFEGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
             I I+++ DLIQ+ IY GFP+LLIE Q+ GI +++ ++       ++ L + +T V +P
Sbjct: 61  ARIGIKKRIDLIQVIIYIGFPNLLIEGQTRGIEELQMNVEKEFHSVNRRLNIAITRVEKP 120

Query: 611 YGEPKILAEHVASQ 652
           YG+P ILAE++A Q
Sbjct: 121 YGQPNILAEYIALQ 134


>tr|B3TLZ9|B3TLZ9_ELAGV Ribosomal protein S3 OS=Elaeis guineensis
           var. tenera PE=2 SV=1
          Length = 221

 Score =  127 bits (320), Expect = 5e-28
 Identities = 61/134 (45%), Positives = 95/134 (70%)
 Frame = +2

Query: 251 MGRKIHPLGFRLGVS*KHYSYRFAQKKDYPKFLEEDRKIRNLLEKYIQKHVKSVSNYGGV 430
           MG+KI+PLGFRLG +  H S+ FAQ K+Y   L+ED KIRN ++ Y+QK+ +  S + G+
Sbjct: 1   MGQKINPLGFRLGTTQSHRSFWFAQTKNYSVGLQEDEKIRNCIKNYVQKNRRISSGFEGI 60

Query: 431 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 610
             I IQ++ DLIQ+ I+ GFP+LLIE Q+ GI +++ +++  L   ++ L + +T + +P
Sbjct: 61  ARIGIQKRIDLIQVIIHIGFPNLLIEGQTRGIEELQMNVQKELHSVNRRLNIAITRIEKP 120

Query: 611 YGEPKILAEHVASQ 652
           YG+P ILAE++A Q
Sbjct: 121 YGQPNILAEYIALQ 134