DK950191
Clone id TST38A01NGRL0008_A02
Library
Length 188
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_A02. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GGCTCATCGCTCCCCGTCCGTATTGCCCAGCCCTTCGTCTGTCCTGCGCCAAGCTTCGCT
GCAACCCTTATGCTCAAAGGCTAAGATGGACGCTTTGAGGGAAGCTACTATGCCTTCATG
CTTGTCATCTGGACTCGGAGCTGTGCTGTCACGAAAGGAGTGCAACTTGATCGTTACCCA
TGCGGTTG
■■Homology search results ■■ -
sp_hit_id A1B1H7
Definition sp|A1B1H7|CLPX_PARDP ATP-dependent Clp protease ATP-binding subunit clpX OS=Paracoccus denitrificans (strain Pd 1222)
Align length 39
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950191|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_A02, 5'
(188 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A1B1H7|CLPX_PARDP ATP-dependent Clp protease ATP-binding subu... 30 3.8

>sp|A1B1H7|CLPX_PARDP ATP-dependent Clp protease ATP-binding subunit
clpX OS=Paracoccus denitrificans (strain Pd 1222)
GN=clpX PE=3 SV=1
Length = 421

Score = 30.0 bits (66), Expect = 3.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2

Query: 71 CSKAKMDALREATMPSCLSSGLGAVLSRKECNLIVTHAV 187
C + MD +RE T S L SG G R+ CN++ + +
Sbjct: 40 CVELCMDIIREETKSSALKSGDGVPTPREICNVLDDYVI 78


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950191|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_A02, 5'
(188 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******