DK950193 |
Clone id |
TST38A01NGRL0008_A04 |
Library |
TST38 |
Length |
639 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_A04. 5' end sequence. |
Accession |
DK950193 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1684Contig1 |
Sequence |
CGTAAAAGTAGGCATGATGGTTACATATAAAGTGGGGACGGGTTTGGTGATTGCCAAGCG ACCCGATGGATCATGGTCAGCTCCTTCTGCAATAATTTCAACTGGTGTTGGATGGGGACC ACAGGGGGGTGGAGAGATTACAGATTTCATATTGGTGCTGCGAAATGGTGCAGCAGTGAA GGCCTTTGCTGGTAGGGTTCATCTCTCGCTCGGAGCGGGTTTAAGTGTTGCAGCAGGACC ATTAGGGCGAACTTTTGAAGCAGACGTCCGAGCAGGGGATGGTGGTGCTACGGCTTGCTA CACCTATAGCCTCAGTAAAGGTTTATTTGCAGGTTGCTCTTTAGAAGGCAATGTAGTGTT AACACGTGTTGGGACAAATGTTCAGTTCTATGGAGATCCATCTATAAGTGCAACTGAGAT TCTCATGGGATCAGTGAAGCAGCCAAAAGCAGCTGCCCCTCTGTACGCCAAAGTTTCGGA GTTGTTCTACAAAGCTCATGGAAGTCGGCGGTGAAAAAGACACTCAATGCACCTTGACTC CTTTTCAGCTTCTCTTTTCATTTGTACATAGCCAAGCTCTCAATCAATACATACCCATCC GCATTGATTTTCAGTTCAGGGTTCCCCACAAAGTTAGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9URW6 |
Definition |
sp|Q9URW6|YIE2_SCHPO SH3 domain-containing protein PJ696.02 OS=Schizosaccharomyces pombe |
Align length |
156 |
Score (bit) |
142.0 |
E-value |
1.0e-33 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TQ90 |
Definition |
tr|A9TQ90|A9TQ90_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
164 |
Score (bit) |
227.0 |
E-value |
4.0e-58 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950193|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_A04, 5' (639 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TQ90|A9TQ90_PHYPA Predicted protein OS=Physcomitrella paten... 227 4e-58 tr|B8LMY3|B8LMY3_PICSI Putative uncharacterized protein OS=Picea... 224 3e-57 tr|A7P238|A7P238_VITVI Chromosome chr19 scaffold_4, whole genome... 221 3e-56 tr|Q7X6I6|Q7X6I6_ORYSJ Os07g0616900 protein OS=Oryza sativa subs... 220 5e-56 tr|A2YNQ3|A2YNQ3_ORYSI Putative uncharacterized protein OS=Oryza... 220 5e-56 tr|A7PDQ2|A7PDQ2_VITVI Chromosome chr11 scaffold_13, whole genom... 217 5e-55 tr|A7QDF4|A7QDF4_VITVI Chromosome chr10 scaffold_81, whole genom... 215 2e-54 tr|Q9LXL1|Q9LXL1_ARATH Putative uncharacterized protein F7K15_80... 214 3e-54 tr|Q8LG81|Q8LG81_ARATH Putative uncharacterized protein OS=Arabi... 214 3e-54 tr|B6SYC4|B6SYC4_MAIZE Senescence-associated-like protein OS=Zea... 214 4e-54 tr|Q5GAQ5|Q5GAQ5_MAIZE Putative senescence-associated-like prote... 213 8e-54 tr|Q5Z9E4|Q5Z9E4_ORYSJ Os06g0552400 protein OS=Oryza sativa subs... 212 2e-53 tr|A9PHU1|A9PHU1_POPTR Putative uncharacterized protein OS=Popul... 211 4e-53 tr|B6TVQ4|B6TVQ4_MAIZE Senescence-associated-like protein OS=Zea... 207 6e-52 tr|B4FKB6|B4FKB6_MAIZE Putative uncharacterized protein OS=Zea m... 207 6e-52 tr|Q6EUF2|Q6EUF2_ORYSJ Os02g0233100 protein OS=Oryza sativa subs... 206 7e-52 tr|B8AEK2|B8AEK2_ORYSI Putative uncharacterized protein OS=Oryza... 205 2e-51 tr|B8A231|B8A231_MAIZE Putative uncharacterized protein OS=Zea m... 204 4e-51 tr|Q84WW7|Q84WW7_ARATH Putative uncharacterized protein At1g2980... 202 1e-50 tr|Q2V4K1|Q2V4K1_ARATH Uncharacterized protein At1g29800.2 OS=Ar... 202 1e-50 tr|B6SKK2|B6SKK2_MAIZE Zinc ion binding protein OS=Zea mays PE=2... 202 1e-50 tr|B6TBE8|B6TBE8_MAIZE Zinc ion binding protein OS=Zea mays PE=2... 201 3e-50 tr|Q6Z4J7|Q6Z4J7_ORYSJ Os07g0272400 protein OS=Oryza sativa subs... 199 9e-50 tr|A3BIJ2|A3BIJ2_ORYSJ Putative uncharacterized protein OS=Oryza... 199 9e-50 tr|A2YK60|A2YK60_ORYSI Putative uncharacterized protein OS=Oryza... 199 9e-50 tr|A3A4V4|A3A4V4_ORYSJ Putative uncharacterized protein OS=Oryza... 197 6e-49 tr|A5AFZ0|A5AFZ0_VITVI Putative uncharacterized protein OS=Vitis... 159 1e-37 tr|A3BCM8|A3BCM8_ORYSJ Putative uncharacterized protein OS=Oryza... 151 4e-35 tr|B8B3K6|B8B3K6_ORYSI Putative uncharacterized protein OS=Oryza... 150 5e-35 tr|B6JX43|B6JX43_SCHJP Actin cortical patch component Lsb4 OS=Sc... 145 3e-33
>tr|A9TQ90|A9TQ90_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_224388 PE=4 SV=1 Length = 393
Score = 227 bits (579), Expect = 4e-58 Identities = 106/164 (64%), Positives = 130/164 (79%) Frame = +2
Query: 2 VKVGMMVTYKVGTGLVIAKRPDGSWSAPSAIISTGVGWGPQGGGEITDFILVLRNGAAVK 181 +K GMMVTYK+GTGL+IA++PDGSWSAPSA+ S G+GWGPQ GGE+TDFI+VLR VK Sbjct: 224 LKAGMMVTYKLGTGLIIARKPDGSWSAPSAMASCGLGWGPQAGGELTDFIIVLRTMKDVK 283
Query: 182 AFAGRVHLSLGAGLSVAAGPLGRTFEADVRAGDGGATACYTYSLSKGLFAGCSLEGNVVL 361 F RVH S+GAG+S AAGP+GR EAD+RAGD GA CYTYS SKG F G SLE N+V Sbjct: 284 TFCSRVHFSMGAGVSAAAGPVGRVAEADIRAGDRGAATCYTYSCSKGAFVGISLEYNLVA 343
Query: 362 TRVGTNVQFYGDPSISATEILMGSVKQPKAAAPLYAKVSELFYK 493 TR TN FYGDP ++A++IL+GSV +P+AA PLY+ + +LF K Sbjct: 344 TRTATNANFYGDPYLTASDILLGSVSRPRAAGPLYSALHDLFGK 387
>tr|B8LMY3|B8LMY3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 489
Score = 224 bits (572), Expect = 3e-57 Identities = 108/161 (67%), Positives = 131/161 (81%) Frame = +2
Query: 5 KVGMMVTYKVGTGLVIAKRPDGSWSAPSAIISTGVGWGPQGGGEITDFILVLRNGAAVKA 184 K G+ +TYK+GTG+VIA+R +GSWSAPSAI S G+GWG Q GGE+TDF++VLRN AVKA Sbjct: 322 KAGVGITYKLGTGIVIARRENGSWSAPSAIASFGLGWGAQIGGELTDFVIVLRNFEAVKA 381
Query: 185 FAGRVHLSLGAGLSVAAGPLGRTFEADVRAGDGGATACYTYSLSKGLFAGCSLEGNVVLT 364 F+ RVH SLG GLSVAAGPLGR EAD+RAGD G TACYTYS SKG F G SLEGN+V Sbjct: 382 FSSRVHFSLGGGLSVAAGPLGRVVEADLRAGDEGTTACYTYSSSKGAFLGVSLEGNIVTA 441
Query: 365 RVGTNVQFYGDPSISATEILMGSVKQPKAAAPLYAKVSELF 487 R TN++FYGDP ++ T+IL GSV++P+AAAPLY + +LF Sbjct: 442 RSDTNMRFYGDPYLTPTDILFGSVERPRAAAPLYNALHDLF 482
>tr|A7P238|A7P238_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027866001 PE=4 SV=1 Length = 484
Score = 221 bits (563), Expect = 3e-56 Identities = 107/163 (65%), Positives = 128/163 (78%) Frame = +2
Query: 5 KVGMMVTYKVGTGLVIAKRPDGSWSAPSAIISTGVGWGPQGGGEITDFILVLRNGAAVKA 184 KVG+MVTY +GTGLVIA+R DGSWS PSAI S G+GWG Q GGE+TDFI+VLR AVK Sbjct: 319 KVGVMVTYNIGTGLVIARREDGSWSPPSAISSFGIGWGAQAGGELTDFIIVLRTNNAVKT 378
Query: 185 FAGRVHLSLGAGLSVAAGPLGRTFEADVRAGDGGATACYTYSLSKGLFAGCSLEGNVVLT 364 F+G +H S+GAGLS A G GR+ EADVRAGDGG ACYTYS KG F GCSL+GN+V T Sbjct: 379 FSGNMHFSVGAGLSAAVGIAGRSAEADVRAGDGGYAACYTYSCCKGAFVGCSLKGNIVTT 438
Query: 365 RVGTNVQFYGDPSISATEILMGSVKQPKAAAPLYAKVSELFYK 493 R N +FYG+PSISA++IL+GS+ +P AAA LY +S+LF K Sbjct: 439 RSQENCRFYGNPSISASDILLGSLPRPPAAATLYHALSDLFLK 481
>tr|Q7X6I6|Q7X6I6_ORYSJ Os07g0616900 protein OS=Oryza sativa subsp. japonica GN=P0552F09.102 PE=4 SV=1 Length = 462
Score = 220 bits (561), Expect = 5e-56 Identities = 106/163 (65%), Positives = 130/163 (79%) Frame = +2
Query: 5 KVGMMVTYKVGTGLVIAKRPDGSWSAPSAIISTGVGWGPQGGGEITDFILVLRNGAAVKA 184 K G ++TYKVGTGLV+A+R DGSWSAPSAI S G+GWG Q GGE+TDFI+VL + AVKA Sbjct: 297 KAGAVLTYKVGTGLVVARRSDGSWSAPSAIASVGLGWGVQFGGELTDFIIVLHDRKAVKA 356
Query: 185 FAGRVHLSLGAGLSVAAGPLGRTFEADVRAGDGGATACYTYSLSKGLFAGCSLEGNVVLT 364 F+ R+HLSLGAGLS AAGP+GR FEADVRA + G+ CYTYS SKG F G SLEGNVV T Sbjct: 357 FSSRMHLSLGAGLSAAAGPIGRAFEADVRASEKGSGLCYTYSCSKGAFVGVSLEGNVVTT 416
Query: 365 RVGTNVQFYGDPSISATEILMGSVKQPKAAAPLYAKVSELFYK 493 R TN++FYGD ++ T+IL G V++P+AA PLY+ + +LF K Sbjct: 417 RSETNLRFYGDAYLTTTDILFGKVEKPRAAQPLYSALDDLFSK 459
>tr|A2YNQ3|A2YNQ3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26875 PE=4 SV=1 Length = 462
Score = 220 bits (561), Expect = 5e-56 Identities = 106/163 (65%), Positives = 130/163 (79%) Frame = +2
Query: 5 KVGMMVTYKVGTGLVIAKRPDGSWSAPSAIISTGVGWGPQGGGEITDFILVLRNGAAVKA 184 K G ++TYKVGTGLV+A+R DGSWSAPSAI S G+GWG Q GGE+TDFI+VL + AVKA Sbjct: 297 KAGAVLTYKVGTGLVVARRSDGSWSAPSAIASVGLGWGVQFGGELTDFIIVLHDRKAVKA 356
Query: 185 FAGRVHLSLGAGLSVAAGPLGRTFEADVRAGDGGATACYTYSLSKGLFAGCSLEGNVVLT 364 F+ R+HLSLGAGLS AAGP+GR FEADVRA + G+ CYTYS SKG F G SLEGNVV T Sbjct: 357 FSSRMHLSLGAGLSAAAGPIGRAFEADVRASEKGSGLCYTYSCSKGAFVGVSLEGNVVTT 416
Query: 365 RVGTNVQFYGDPSISATEILMGSVKQPKAAAPLYAKVSELFYK 493 R TN++FYGD ++ T+IL G V++P+AA PLY+ + +LF K Sbjct: 417 RSETNLRFYGDAYLTTTDILFGKVEKPRAAQPLYSALDDLFSK 459
>tr|A7PDQ2|A7PDQ2_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016369001 PE=4 SV=1 Length = 398
Score = 217 bits (552), Expect = 5e-55 Identities = 101/163 (61%), Positives = 126/163 (77%) Frame = +2
Query: 5 KVGMMVTYKVGTGLVIAKRPDGSWSAPSAIISTGVGWGPQGGGEITDFILVLRNGAAVKA 184 K GM+V+YK+GTGLV+A+R DGSWSAPSAI S G+GWG Q GGE+ DFI+VL AVK Sbjct: 233 KAGMLVSYKLGTGLVVARRSDGSWSAPSAIFSVGLGWGAQIGGELMDFIIVLHGSKAVKT 292
Query: 185 FAGRVHLSLGAGLSVAAGPLGRTFEADVRAGDGGATACYTYSLSKGLFAGCSLEGNVVLT 364 F R+H SLGAG S AAGP+GR EAD+RAGD G+ CYTYS SKG F G SLEGN+V T Sbjct: 293 FCSRMHFSLGAGCSAAAGPVGRVLEADLRAGDRGSGMCYTYSCSKGAFVGVSLEGNIVAT 352
Query: 365 RVGTNVQFYGDPSISATEILMGSVKQPKAAAPLYAKVSELFYK 493 R+ TN++FYGDP ++ +IL+G+V +PKAA PLY + +L+ K Sbjct: 353 RMDTNLRFYGDPYLTTADILLGTVDRPKAAEPLYTALKDLYSK 395
>tr|A7QDF4|A7QDF4_VITVI Chromosome chr10 scaffold_81, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035818001 PE=4 SV=1 Length = 474
Score = 215 bits (548), Expect = 2e-54 Identities = 105/167 (62%), Positives = 127/167 (76%) Frame = +2
Query: 2 VKVGMMVTYKVGTGLVIAKRPDGSWSAPSAIISTGVGWGPQGGGEITDFILVLRNGAAVK 181 VKVGMMVTY++GTGLV+A++ DGSWS PSAI S GVGWG Q GGE+TDFI+VLR AVK Sbjct: 308 VKVGMMVTYRIGTGLVVARKEDGSWSPPSAISSFGVGWGAQVGGELTDFIIVLRTNDAVK 367
Query: 182 AFAGRVHLSLGAGLSVAAGPLGRTFEADVRAGDGGATACYTYSLSKGLFAGCSLEGNVVL 361 F+G HLS+G GLS A G +GR EADVRAGDGG ACYTYS SKG F GCS+ G++ Sbjct: 368 TFSGNAHLSVGGGLSAAVGIVGRAVEADVRAGDGGFAACYTYSCSKGAFLGCSIVGSIFT 427
Query: 362 TRVGTNVQFYGDPSISATEILMGSVKQPKAAAPLYAKVSELFYKAHG 502 TR N +FYG SISA++IL+GS+ QP AAA LY +++L+ K G Sbjct: 428 TRKQENSRFYGSQSISASDILLGSLPQPPAAAILYRALTDLYQKLDG 474
>tr|Q9LXL1|Q9LXL1_ARATH Putative uncharacterized protein F7K15_80 (Putative uncharacterized protein At3g43230) OS=Arabidopsis thaliana GN=F7K15_80 PE=2 SV=1 Length = 485
Score = 214 bits (546), Expect = 3e-54 Identities = 102/161 (63%), Positives = 125/161 (77%) Frame = +2
Query: 5 KVGMMVTYKVGTGLVIAKRPDGSWSAPSAIISTGVGWGPQGGGEITDFILVLRNGAAVKA 184 K G +++YK+GTGLVI++RPDGSWSAPSAI+S G+GWG Q GGE+ DFI+VL + AVK Sbjct: 320 KAGALLSYKLGTGLVISRRPDGSWSAPSAILSVGLGWGAQIGGELMDFIIVLHDVKAVKT 379
Query: 185 FAGRVHLSLGAGLSVAAGPLGRTFEADVRAGDGGATACYTYSLSKGLFAGCSLEGNVVLT 364 F R+H SLGAG S AAGP+GR EAD+RAGD G+ CYTYS SKG F G SLEGN+V T Sbjct: 380 FCSRMHFSLGAGCSAAAGPIGRVLEADLRAGDKGSGVCYTYSRSKGAFVGVSLEGNLVAT 439
Query: 365 RVGTNVQFYGDPSISATEILMGSVKQPKAAAPLYAKVSELF 487 R NV+FYGDP +S ++IL+G V QPKAA PLY + EL+ Sbjct: 440 RRDMNVKFYGDPYLSTSDILLGMVDQPKAAEPLYTALRELY 480
>tr|Q8LG81|Q8LG81_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 486
Score = 214 bits (546), Expect = 3e-54 Identities = 102/161 (63%), Positives = 125/161 (77%) Frame = +2
Query: 5 KVGMMVTYKVGTGLVIAKRPDGSWSAPSAIISTGVGWGPQGGGEITDFILVLRNGAAVKA 184 K G +++YK+GTGLVI++RPDGSWSAPSAI+S G+GWG Q GGE+ DFI+VL + AVK Sbjct: 321 KAGALLSYKLGTGLVISRRPDGSWSAPSAILSVGLGWGAQIGGELMDFIIVLHDVKAVKT 380
Query: 185 FAGRVHLSLGAGLSVAAGPLGRTFEADVRAGDGGATACYTYSLSKGLFAGCSLEGNVVLT 364 F R+H SLGAG S AAGP+GR EAD+RAGD G+ CYTYS SKG F G SLEGN+V T Sbjct: 381 FCSRMHFSLGAGCSAAAGPIGRVLEADLRAGDKGSGVCYTYSRSKGAFVGVSLEGNLVAT 440
Query: 365 RVGTNVQFYGDPSISATEILMGSVKQPKAAAPLYAKVSELF 487 R NV+FYGDP +S ++IL+G V QPKAA PLY + EL+ Sbjct: 441 RRDMNVKFYGDPYLSTSDILLGMVDQPKAAEPLYTALRELY 481
>tr|B6SYC4|B6SYC4_MAIZE Senescence-associated-like protein OS=Zea mays PE=2 SV=1 Length = 462
Score = 214 bits (545), Expect = 4e-54 Identities = 102/163 (62%), Positives = 128/163 (78%) Frame = +2
Query: 5 KVGMMVTYKVGTGLVIAKRPDGSWSAPSAIISTGVGWGPQGGGEITDFILVLRNGAAVKA 184 K G ++TYKVGTGLV+A+R DGSWSAPSAI+S G+GWG Q GGE+TDF + AVKA Sbjct: 297 KAGAVLTYKVGTGLVVARRSDGSWSAPSAILSVGLGWGVQIGGELTDFXXXXHDRKAVKA 356
Query: 185 FAGRVHLSLGAGLSVAAGPLGRTFEADVRAGDGGATACYTYSLSKGLFAGCSLEGNVVLT 364 F+ R+H SLGAGLS AAGP+GR FEADVRA + G+ CYTYS +KG F G SLEGNVV T Sbjct: 357 FSSRIHXSLGAGLSAAAGPIGRAFEADVRASEKGSGICYTYSCTKGAFVGVSLEGNVVTT 416
Query: 365 RVGTNVQFYGDPSISATEILMGSVKQPKAAAPLYAKVSELFYK 493 R+ TN++FYGD ++AT+IL G V++P+AA PLY+ + +LF K Sbjct: 417 RMETNLRFYGDAYLTATDILFGRVERPRAAQPLYSALDDLFSK 459
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