DK950243 |
Clone id |
TST38A01NGRL0008_C07 |
Library |
TST38 |
Length |
670 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_C07. 5' end sequence. |
Accession |
DK950243 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1439Contig1 |
Sequence |
CTTATGCTTGCAATTTAGCGAGGGGTTCTGCGTCGGCATGGCTGCAGATCTGTTACTGCT AAGGGCTTTTGGAGTCCTGCTTCTCCTGCTCTTCTGCCCCTGCACGAGTGCAACAGACGA AGCCTTCCTGGTGGTGCACAAACGCGCTTCCATCTCAAAGCTCAAGTCCGTAGAGCATGT CACCGTCTCCATCAGCCTCCATAACGTGGGCTTCAGCACTGCGTATGATGTGAGTTTGAA TGACGACACCTGGCCTAGTGAAAAGTTTAACCTGGTTAATGGAAACGCTTCCAACTCATG GGACAAGCTAGAAGCGGGAAAGTCTGTGGTTCATGTTTTTGTTCTGGAGTCAAGGGAAAA AGGTCTCTTCTATGGAGCCCCTGCTGTTGTTAGATACAGGATCACCGGAAAATCTGCACT GCAGGAAGCATTTTCCACCCCGATCCACGAATTGGACTTACTTGCAGAGAAGTCCTCAGA ACAGAAGTTTCTATGGCTGAAGGATTTTGCCGTTAAGTATGGACCTCTTGTGTCTGTCCT ATCTGCTATAAGTCTCTTTACTTATTTGTTAATCACACCTACAAAGTCTAAGGCGGCAAA AGCTAAAAAGAAGAAGTGACTTCCCTGGACATTGTAGAAGCATCAAGGAACAAGCAAGAA TCGCTTTGTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5E9E4 |
Definition |
sp|Q5E9E4|SSRB_BOVIN Translocon-associated protein subunit beta OS=Bos taurus |
Align length |
129 |
Score (bit) |
62.0 |
E-value |
3.0e-09 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P297 |
Definition |
tr|A9P297|A9P297_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
159 |
Score (bit) |
196.0 |
E-value |
1.0e-48 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950243|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_C07, 5' (670 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P297|A9P297_PICSI Putative uncharacterized protein OS=Picea... 196 1e-48 tr|Q2VCI0|Q2VCI0_SOLTU Translocon-associated protein beta family... 175 3e-42 tr|B6TGJ2|B6TGJ2_MAIZE Translocon-associated protein beta contai... 169 2e-40 tr|B6SN99|B6SN99_MAIZE Translocon-associated protein beta contai... 168 2e-40 tr|B4FTC9|B4FTC9_MAIZE Putative uncharacterized protein OS=Zea m... 168 2e-40 tr|A9PCS0|A9PCS0_POPTR Putative uncharacterized protein OS=Popul... 167 6e-40 tr|Q655K7|Q655K7_ORYSJ Putative uncharacterized protein P0672D08... 166 9e-40 tr|B7ENG6|B7ENG6_ORYSJ cDNA clone:J023002L13, full insert sequen... 166 2e-39 tr|Q7F2E5|Q7F2E5_ORYSJ P0402A09.25 protein (P0455C04.19 protein)... 159 2e-37 tr|Q94BY3|Q94BY3_ARATH AT5g14030/MUA22_2 (Putative uncharacteriz... 154 6e-36 tr|B8ACS3|B8ACS3_ORYSI Putative uncharacterized protein OS=Oryza... 149 1e-34 tr|A7PA07|A7PA07_VITVI Chromosome chr14 scaffold_9, whole genome... 149 2e-34 tr|A5BI68|A5BI68_VITVI Putative uncharacterized protein (Fragmen... 149 2e-34 tr|B7EUG6|B7EUG6_ORYSJ cDNA clone:J033125H15, full insert sequen... 149 2e-34 tr|Q9FMU7|Q9FMU7_ARATH Genomic DNA, chromosome 5, P1 clone:MUA22... 148 3e-34 tr|Q0JRG3|Q0JRG3_ORYSJ Os01g0102700 protein OS=Oryza sativa subs... 143 9e-33 tr|A2ZN97|A2ZN97_ORYSJ Putative uncharacterized protein OS=Oryza... 142 1e-32 tr|B8AWJ6|B8AWJ6_ORYSI Putative uncharacterized protein OS=Oryza... 142 2e-32 tr|A3AZ20|A3AZ20_ORYSJ Putative uncharacterized protein OS=Oryza... 139 2e-31 tr|Q0DLG8|Q0DLG8_ORYSJ Os05g0103100 protein OS=Oryza sativa subs... 126 1e-27 tr|A9PBP2|A9PBP2_POPTR Putative uncharacterized protein OS=Popul... 121 5e-26 tr|B4FPY4|B4FPY4_MAIZE Putative uncharacterized protein OS=Zea m... 110 8e-23 tr|B6RB52|B6RB52_HALDI Signal sequence receptor beta-like protei... 65 4e-09 tr|B5FY73|B5FY73_TAEGU Putative signal sequence receptor beta va... 63 1e-08 tr|B0JYM9|B0JYM9_BOVIN SSR2 protein OS=Bos taurus GN=SSR2 PE=2 SV=1 63 2e-08 tr|B5FY74|B5FY74_TAEGU Putative signal sequence receptor beta va... 62 3e-08 tr|Q5ZLW9|Q5ZLW9_CHICK Putative uncharacterized protein OS=Gallu... 61 6e-08 tr|Q98SP1|Q98SP1_XENLA Signal sequence receptor beta subunit (MG... 60 1e-07 tr|Q6DK88|Q6DK88_XENTR MGC69435 protein (Signal sequence recepto... 60 2e-07 tr|Q70ML7|Q70ML7_CRAGI Signal sequence receptor beta-like protei... 60 2e-07
>tr|A9P297|A9P297_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 192
Score = 196 bits (497), Expect = 1e-48 Identities = 95/159 (59%), Positives = 123/159 (77%), Gaps = 1/159 (0%) Frame = +2
Query: 110 ATDEAFLVVHKRASISKLKS-VEHVTVSISLHNVGFSTAYDVSLNDDTWPSEKFNLVNGN 286 A + F+VVHK+ S++K KS E VTVSI L+N G +TAYDVSL DD+WPS+ F+LV+GN Sbjct: 22 AAETPFMVVHKKVSLNKGKSDTERVTVSIDLYNRGSTTAYDVSLIDDSWPSDTFSLVSGN 81
Query: 287 ASNSWDKLEAGKSVVHVFVLESREKGLFYGAPAVVRYRITGKSALQEAFSTPIHELDLLA 466 S +WDKL+ G SV H FVLES+ KGLFYG PAVV+YR+ KS LQEA+S+PI LD+LA Sbjct: 82 TSFTWDKLDVGASVSHTFVLESKVKGLFYGRPAVVKYRVAAKSVLQEAYSSPIPPLDILA 141
Query: 467 EKSSEQKFLWLKDFAVKYGPLVSVLSAISLFTYLLITPT 583 E++ E+K+ W K A KYGPL SVLS + LF YL+++P+ Sbjct: 142 ERAPEKKYEWAKKLAAKYGPLTSVLSIVGLFVYLMVSPS 180
>tr|Q2VCI0|Q2VCI0_SOLTU Translocon-associated protein beta family protein-like OS=Solanum tuberosum PE=2 SV=1 Length = 192
Score = 175 bits (443), Expect = 3e-42 Identities = 83/160 (51%), Positives = 120/160 (75%), Gaps = 1/160 (0%) Frame = +2
Query: 107 SATDEAFLVVHKRASISKLKS-VEHVTVSISLHNVGFSTAYDVSLNDDTWPSEKFNLVNG 283 +A+D F+V HK+A++++LKS +E +++SI ++N G +TAYDVSL DD W + F +V G Sbjct: 24 AASDGPFIVAHKKAALTRLKSDIERISISIDIYNEGSATAYDVSLYDDNWSQDVFEIVAG 83
Query: 284 NASNSWDKLEAGKSVVHVFVLESREKGLFYGAPAVVRYRITGKSALQEAFSTPIHELDLL 463 N S SW++L+AG S+ H F LE+++K +FYGAPAV+ +RI K+ALQEAFSTPI LD+L Sbjct: 84 NTSMSWERLDAGASLSHSFELEAKKKTVFYGAPAVITFRIPTKAALQEAFSTPILPLDIL 143
Query: 464 AEKSSEQKFLWLKDFAVKYGPLVSVLSAISLFTYLLITPT 583 A++ E+KF W K KYG L+SV+S + LF YLL +P+ Sbjct: 144 ADRPPEKKFDWAKKLMAKYGSLISVISIVVLFVYLLASPS 183
>tr|B6TGJ2|B6TGJ2_MAIZE Translocon-associated protein beta containing protein OS=Zea mays PE=2 SV=1 Length = 190
Score = 169 bits (427), Expect = 2e-40 Identities = 81/160 (50%), Positives = 114/160 (71%), Gaps = 1/160 (0%) Frame = +2
Query: 107 SATDEAFLVVHKRASISKLK-SVEHVTVSISLHNVGFSTAYDVSLNDDTWPSEKFNLVNG 283 SA D F+V HK+ S+S+ K VE V VS+ L+N G +TAYDVSLNDD+WP++ F LV G Sbjct: 20 SAADAPFVVAHKKVSLSRPKPGVERVAVSLDLYNQGSATAYDVSLNDDSWPTQAFELVTG 79
Query: 284 NASNSWDKLEAGKSVVHVFVLESREKGLFYGAPAVVRYRITGKSALQEAFSTPIHELDLL 463 S + ++L+ G + H +VLE++ +G F G+PA++ YR+ K+ALQEA+STPI LD+L Sbjct: 80 EKSKTLERLDPGATATHTYVLETKTQGRFQGSPAIITYRVPTKTALQEAYSTPIFPLDIL 139
Query: 464 AEKSSEQKFLWLKDFAVKYGPLVSVLSAISLFTYLLITPT 583 AE+ E+KF W K KYG LVSV+S + LF YL+ +P+ Sbjct: 140 AERLPEKKFEWAKRLVAKYGSLVSVVSFVGLFIYLVASPS 179
>tr|B6SN99|B6SN99_MAIZE Translocon-associated protein beta containing protein OS=Zea mays PE=2 SV=1 Length = 191
Score = 168 bits (426), Expect = 2e-40 Identities = 81/160 (50%), Positives = 115/160 (71%), Gaps = 1/160 (0%) Frame = +2
Query: 107 SATDEAFLVVHKRASISKLK-SVEHVTVSISLHNVGFSTAYDVSLNDDTWPSEKFNLVNG 283 SA D F+V HK+ S+S+ K VE V VS+ L+N G +TAYDVS+NDD+WP+E F LV G Sbjct: 21 SAADAPFVVAHKKISLSRPKPGVERVAVSLDLYNQGSATAYDVSINDDSWPTEVFELVTG 80
Query: 284 NASNSWDKLEAGKSVVHVFVLESREKGLFYGAPAVVRYRITGKSALQEAFSTPIHELDLL 463 S + ++L+ G + H +VLE++ +G F G+PA++ YR+ K+ALQEA+STPI LD+L Sbjct: 81 EKSKTLERLDPGATASHTYVLETKTQGRFQGSPAIITYRVPTKTALQEAYSTPIFPLDIL 140
Query: 464 AEKSSEQKFLWLKDFAVKYGPLVSVLSAISLFTYLLITPT 583 AE+ E+KF W K +KYG LVSV+S + LF YL+ +P+ Sbjct: 141 AERPPEKKFEWAKRLVMKYGSLVSVVSFVGLFIYLVASPS 180
>tr|B4FTC9|B4FTC9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 190
Score = 168 bits (426), Expect = 2e-40 Identities = 81/160 (50%), Positives = 115/160 (71%), Gaps = 1/160 (0%) Frame = +2
Query: 107 SATDEAFLVVHKRASISKLK-SVEHVTVSISLHNVGFSTAYDVSLNDDTWPSEKFNLVNG 283 SA D F+V HK+ S+S+ K VE V VS+ L+N G +TAYDVS+NDD+WP+E F LV G Sbjct: 20 SAADAPFVVAHKKISLSRPKPGVERVAVSLDLYNQGSATAYDVSINDDSWPTEVFELVTG 79
Query: 284 NASNSWDKLEAGKSVVHVFVLESREKGLFYGAPAVVRYRITGKSALQEAFSTPIHELDLL 463 S + ++L+ G + H +VLE++ +G F G+PA++ YR+ K+ALQEA+STPI LD+L Sbjct: 80 EKSKTLERLDPGATASHTYVLETKTQGRFQGSPAIITYRVPTKTALQEAYSTPIFPLDIL 139
Query: 464 AEKSSEQKFLWLKDFAVKYGPLVSVLSAISLFTYLLITPT 583 AE+ E+KF W K +KYG LVSV+S + LF YL+ +P+ Sbjct: 140 AERPPEKKFEWAKRLVMKYGSLVSVVSFVGLFIYLVASPS 179
>tr|A9PCS0|A9PCS0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 196
Score = 167 bits (423), Expect = 6e-40 Identities = 83/160 (51%), Positives = 115/160 (71%), Gaps = 1/160 (0%) Frame = +2
Query: 107 SATDEAFLVVHKRASISKLKS-VEHVTVSISLHNVGFSTAYDVSLNDDTWPSEKFNLVNG 283 +++D F+V HK+A+ LKS E V+VSI ++N G STAYD++L DD WP + F++V+G Sbjct: 25 ASSDVPFIVAHKKATPRGLKSGAERVSVSIDIYNQGSSTAYDITLTDDHWPKDIFDVVSG 84
Query: 284 NASNSWDKLEAGKSVVHVFVLESREKGLFYGAPAVVRYRITGKSALQEAFSTPIHELDLL 463 N S SWD+L+AG + H F LE + KG+F+G+PAV+ +RI K+ALQEA+STPI LD+L Sbjct: 85 NTSQSWDRLDAGGLLSHAFELEGKVKGMFHGSPAVITFRIPTKAALQEAYSTPILPLDVL 144
Query: 464 AEKSSEQKFLWLKDFAVKYGPLVSVLSAISLFTYLLITPT 583 AEK QK K KYG L+SV+S + LF YLL+TP+ Sbjct: 145 AEKPPVQKLELAKKLLAKYGSLISVISIVVLFIYLLVTPS 184
>tr|Q655K7|Q655K7_ORYSJ Putative uncharacterized protein P0672D08.46 OS=Oryza sativa subsp. japonica GN=P0672D08.46 PE=4 SV=1 Length = 190
Score = 166 bits (421), Expect = 9e-40 Identities = 80/161 (49%), Positives = 115/161 (71%), Gaps = 1/161 (0%) Frame = +2
Query: 104 TSATDEAFLVVHKRASISKLK-SVEHVTVSISLHNVGFSTAYDVSLNDDTWPSEKFNLVN 280 +++ D FLV HK+ S+S+ K VE + VS+ L+N G +TAYDVS+NDDTWP E F LV+ Sbjct: 18 SASADAPFLVAHKKVSLSRPKPGVERLAVSLDLYNQGSATAYDVSINDDTWPKEAFELVS 77
Query: 281 GNASNSWDKLEAGKSVVHVFVLESREKGLFYGAPAVVRYRITGKSALQEAFSTPIHELDL 460 G S + ++L+ G + H FVLE++ +G F G+PAV+ YR+ K+ALQEA+STPI LD+ Sbjct: 78 GEMSKTLERLDPGVTASHAFVLETKVQGRFQGSPAVITYRVPTKAALQEAYSTPILALDV 137
Query: 461 LAEKSSEQKFLWLKDFAVKYGPLVSVLSAISLFTYLLITPT 583 LAE+ E+KF W+K KYG LVSV+ + +F YL+ +P+ Sbjct: 138 LAERPPEKKFEWVKRLVAKYGSLVSVVGLVGVFIYLVASPS 178
>tr|B7ENG6|B7ENG6_ORYSJ cDNA clone:J023002L13, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 190
Score = 166 bits (419), Expect = 2e-39 Identities = 80/161 (49%), Positives = 114/161 (70%), Gaps = 1/161 (0%) Frame = +2
Query: 104 TSATDEAFLVVHKRASISKLK-SVEHVTVSISLHNVGFSTAYDVSLNDDTWPSEKFNLVN 280 +++ D FLV HK+ S+S+ K VE + VS+ L+N G +TAYDVS+NDDTWP E F LV+ Sbjct: 18 SASADAPFLVAHKKVSLSRPKPGVERLAVSLDLYNQGSATAYDVSINDDTWPKEAFELVS 77
Query: 281 GNASNSWDKLEAGKSVVHVFVLESREKGLFYGAPAVVRYRITGKSALQEAFSTPIHELDL 460 G S + ++L+ G + H FVLE++ +G F G+PAV+ YR+ K+ALQEA+STPI LD+ Sbjct: 78 GEMSKTLERLDPGVTASHAFVLETKVQGRFQGSPAVITYRVPTKAALQEAYSTPILALDV 137
Query: 461 LAEKSSEQKFLWLKDFAVKYGPLVSVLSAISLFTYLLITPT 583 LAE+ E+KF W K KYG LVSV+ + +F YL+ +P+ Sbjct: 138 LAERPPEKKFEWAKRLVAKYGSLVSVVGLVGVFIYLVASPS 178
>tr|Q7F2E5|Q7F2E5_ORYSJ P0402A09.25 protein (P0455C04.19 protein) OS=Oryza sativa subsp. japonica GN=P0402A09.25 PE=4 SV=1 Length = 188
Score = 159 bits (402), Expect = 2e-37 Identities = 79/161 (49%), Positives = 113/161 (70%), Gaps = 1/161 (0%) Frame = +2
Query: 104 TSATDEAFLVVHKRASISKLK-SVEHVTVSISLHNVGFSTAYDVSLNDDTWPSEKFNLVN 280 +++ D FLV HK+ S+S+ K VE + VS+ L+N G +TAYDVS+NDDTWP E F LV+ Sbjct: 18 SASADAPFLVAHKKVSLSRPKPGVERLAVSLDLYNQGSATAYDVSINDDTWPKEAFELVS 77
Query: 281 GNASNSWDKLEAGKSVVHVFVLESREKGLFYGAPAVVRYRITGKSALQEAFSTPIHELDL 460 G S + ++L+ G + H FVLE++ +G F G+PAV+ YR+ K+ALQEA+STPI LD+ Sbjct: 78 GEMSKTLERLDPGVTASHAFVLETKVQGRFQGSPAVITYRVPTKAALQEAYSTPILALDV 137
Query: 461 LAEKSSEQKFLWLKDFAVKYGPLVSVLSAISLFTYLLITPT 583 LAE+ E+KF W KYG LVSV+ + +F YL+ +P+ Sbjct: 138 LAERPPEKKFEW--RLVAKYGSLVSVVGLVGVFIYLVASPS 176
>tr|Q94BY3|Q94BY3_ARATH AT5g14030/MUA22_2 (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At5g14030 PE=2 SV=1 Length = 195
Score = 154 bits (388), Expect = 6e-36 Identities = 80/159 (50%), Positives = 111/159 (69%), Gaps = 2/159 (1%) Frame = +2
Query: 110 ATDEA-FLVVHKRASISKLKS-VEHVTVSISLHNVGFSTAYDVSLNDDTWPSEKFNLVNG 283 AT E F+VVHK+A++++LKS E V+VS ++N G S+AYDV+L D++W + F +VNG Sbjct: 24 ATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSSAYDVTLTDNSWDKKTFEVVNG 83
Query: 284 NASNSWDKLEAGKSVVHVFVLESREKGLFYGAPAVVRYRITGKSALQEAFSTPIHELDLL 463 N S SW++L+AG + H LE++ KG+FYGAPAVV +RI K ALQEA+STP+ LD+L Sbjct: 84 NTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVTFRIPTKPALQEAYSTPLLPLDIL 143
Query: 464 AEKSSEQKFLWLKDFAVKYGPLVSVLSAISLFTYLLITP 580 A+K + K KYG LVSV+S + F YL+ TP Sbjct: 144 ADKPPTKPLDVAKRLLAKYGSLVSVISMVVCFIYLVATP 182
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