DK950260 |
Clone id |
TST38A01NGRL0008_C24 |
Library |
TST38 |
Length |
521 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_C24. 5' end sequence. |
Accession |
DK950260 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL2720Contig1 |
Sequence |
AGGAGAGGCTGAAGAAGGGTGACAAGGTGTGGCAAGTGGCTTTGGGCTCTGGTTTCAAGT GTAATAGTGTTGTATGGAAGGTACTGAGAGATGTGAAGCCGCAACGGGGATTTAATCCTT GGATGGAATGCATCGATAATTATCCAGTGGAAATCACTGACAAAATAACACCGTCACACA AGAATTTCAGTCTGCTCAAGTTATGTGAAGATGAAGCAAATTTATATGAAGAAAATCTAC GGAGGAAGGCCGAGGAAGAATGTCGCGGCAAGCAACAAGCTCAGAACTAATTGAGAGCAC TGTATGTCCGAGAGTGTGCTTGGCAATATGGAAGTATATATATGTATTCGAGTGTTTCTG GTTGATTTCAGAGGAGTGCTTATAAGCTCGCCATCGTAGTGATAATGGTGTAGGCATTCA AGATTGAGCTTCATTGGCATGCTCTGCTGTCTTCCTTATTAATTGAGGTCTAGGTGGGGA TGGCTTTGTTTCGAGTCAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q4V3C9 |
Definition |
sp|Q4V3C9|KCS8_ARATH 3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana |
Align length |
50 |
Score (bit) |
79.3 |
E-value |
9.0e-15 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NVH1 |
Definition |
tr|A9NVH1|A9NVH1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
52 |
Score (bit) |
80.9 |
E-value |
3.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950260|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_C24, 5' (497 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NVH1|A9NVH1_PICSI Putative uncharacterized protein OS=Picea... 81 3e-14 tr|A9TJJ8|A9TJJ8_PHYPA Predicted protein OS=Physcomitrella paten... 79 1e-13 tr|A2YEP6|A2YEP6_ORYSI Putative uncharacterized protein OS=Oryza... 79 2e-13 tr|Q8VWP9|Q8VWP9_GOSHI Fiddlehead-like protein OS=Gossypium hirs... 78 2e-13 tr|Q8RXA6|Q8RXA6_TROMA Putative fatty acid elongase OS=Tropaeolu... 77 5e-13 tr|Q69X62|Q69X62_ORYSJ Os06g0598800 protein OS=Oryza sativa subs... 77 5e-13 tr|Q1ZZJ8|Q1ZZJ8_TROMA Putative fatty acid elongase OS=Tropaeolu... 77 5e-13 tr|Q41301|Q41301_SIMCH Beta-ketoacyl-CoA synthase OS=Simmondsia ... 77 6e-13 tr|A4VCL7|A4VCL7_ARATH At4g34250 OS=Arabidopsis thaliana PE=2 SV=1 76 8e-13 tr|A5AYN9|A5AYN9_VITVI Putative uncharacterized protein (Chromos... 76 1e-12 tr|Q9FXZ8|Q9FXZ8_MAIZE Putative fatty acid elongase OS=Zea mays ... 75 1e-12 tr|Q7XZE7|Q7XZE7_MARPO FAE1 OS=Marchantia polymorpha PE=4 SV=1 75 1e-12 tr|B6THE2|B6THE2_MAIZE Fatty acid elongase OS=Zea mays PE=2 SV=1 75 1e-12 tr|B6SV27|B6SV27_MAIZE Acyltransferase OS=Zea mays PE=2 SV=1 75 1e-12 tr|B4F9H5|B4F9H5_MAIZE Putative uncharacterized protein OS=Zea m... 75 1e-12 tr|A9RGK9|A9RGK9_PHYPA Predicted protein OS=Physcomitrella paten... 75 1e-12 tr|A7NTB9|A7NTB9_VITVI Chromosome chr18 scaffold_1, whole genome... 75 1e-12 tr|Q56NI0|Q56NI0_ISATI Beta-ketoacyl-CoA synthase OS=Isatis tinc... 75 2e-12 tr|A7P378|A7P378_VITVI Chromosome chr1 scaffold_5, whole genome ... 75 2e-12 tr|A2Y7K8|A2Y7K8_ORYSI Putative uncharacterized protein OS=Oryza... 75 2e-12 tr|Q56NH7|Q56NH7_ORYVI Beta-ketoacyl-CoA synthase OS=Orychophrag... 75 2e-12 tr|A7P4W5|A7P4W5_VITVI Chromosome chr4 scaffold_6, whole genome ... 75 2e-12 tr|A9S896|A9S896_PHYPA Predicted protein OS=Physcomitrella paten... 74 3e-12 tr|A9PF01|A9PF01_POPTR Putative uncharacterized protein OS=Popul... 74 3e-12 tr|A2IB85|A2IB85_9BRAS 3-ketoacyl-CoA synthase OS=Teesdalia nudi... 74 3e-12 tr|Q93XD5|Q93XD5_LESFE 3-ketoacyl-CoA synthase OS=Lesquerella fe... 74 4e-12 tr|Q93XF0|Q93XF0_BRANA Fatty acid elongase OS=Brassica napus GN=... 73 7e-12 tr|Q8S3A2|Q8S3A2_BRAOL 3-ketoacyl-CoA synthase OS=Brassica olera... 73 7e-12 tr|Q8S3A1|Q8S3A1_BRACM 3-ketoacyl-CoA synthase OS=Brassica campe... 73 7e-12 tr|Q8S3A0|Q8S3A0_BRANA 3-ketoacyl-CoA synthase OS=Brassica napus... 73 7e-12
>tr|A9NVH1|A9NVH1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 530
Score = 80.9 bits (198), Expect = 3e-14 Identities = 34/52 (65%), Positives = 42/52 (80%) Frame = +3
Query: 6 RLKKGDKVWQVALGSGFKCNSVVWKVLRDVKPQRGFNPWMECIDNYPVEITD 161 ++KKGD+VWQ+A GSGFKCNS VWK LR VK + NPW++C+D YPVEI D Sbjct: 476 QIKKGDRVWQIAFGSGFKCNSAVWKTLRTVK-RSTKNPWLDCVDRYPVEIPD 526
>tr|A9TJJ8|A9TJJ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_195698 PE=4 SV=1 Length = 532
Score = 79.0 bits (193), Expect = 1e-13 Identities = 34/62 (54%), Positives = 46/62 (74%) Frame = +3
Query: 6 RLKKGDKVWQVALGSGFKCNSVVWKVLRDVKPQRGFNPWMECIDNYPVEITDKITPSHKN 185 R+++GDKVWQ+A GSGFKCNS VW+ LR VKP + ++PW +CID PVE+ P++ N Sbjct: 477 RVRRGDKVWQIAFGSGFKCNSAVWRALRTVKPSQ-YSPWRDCIDKLPVEV-----PTYAN 530
Query: 186 FS 191 S Sbjct: 531 IS 532
>tr|A2YEP6|A2YEP6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23590 PE=4 SV=1 Length = 519
Score = 78.6 bits (192), Expect = 2e-13 Identities = 31/50 (62%), Positives = 40/50 (80%) Frame = +3
Query: 6 RLKKGDKVWQVALGSGFKCNSVVWKVLRDVKPQRGFNPWMECIDNYPVEI 155 R++K D++WQ+A GSGFKCNS VWK LR V P + NPWM+ IDN+PVE+ Sbjct: 461 RIRKRDRIWQIAFGSGFKCNSAVWKALRTVNPAKEKNPWMDEIDNFPVEV 510
>tr|Q8VWP9|Q8VWP9_GOSHI Fiddlehead-like protein OS=Gossypium hirsutum GN=FDH PE=2 SV=1 Length = 535
Score = 78.2 bits (191), Expect = 2e-13 Identities = 30/49 (61%), Positives = 40/49 (81%) Frame = +3
Query: 3 ERLKKGDKVWQVALGSGFKCNSVVWKVLRDVKPQRGFNPWMECIDNYPV 149 ER+K+GD++WQ+A GSGFKCNSVVW+ +R V+ NPW++CID YPV Sbjct: 485 ERVKRGDRIWQIAFGSGFKCNSVVWRSMRRVRKPSRDNPWLDCIDRYPV 533
>tr|Q8RXA6|Q8RXA6_TROMA Putative fatty acid elongase OS=Tropaeolum majus PE=2 SV=1 Length = 503
Score = 77.0 bits (188), Expect = 5e-13 Identities = 32/50 (64%), Positives = 39/50 (78%) Frame = +3
Query: 6 RLKKGDKVWQVALGSGFKCNSVVWKVLRDVKPQRGFNPWMECIDNYPVEI 155 R+KKGD+VWQ+A GSGFKCNS VWK LR+V P NPWM+ I +PVE+ Sbjct: 451 RIKKGDRVWQIAFGSGFKCNSAVWKALRNVNPAEEKNPWMDEIHLFPVEV 500
>tr|Q69X62|Q69X62_ORYSJ Os06g0598800 protein OS=Oryza sativa subsp. japonica GN=P0642B07.46 PE=4 SV=1 Length = 519
Score = 77.0 bits (188), Expect = 5e-13 Identities = 30/50 (60%), Positives = 40/50 (80%) Frame = +3
Query: 6 RLKKGDKVWQVALGSGFKCNSVVWKVLRDVKPQRGFNPWMECIDNYPVEI 155 R++K D++WQ+A GSGFKCNS VWK L+ V P + NPWM+ IDN+PVE+ Sbjct: 461 RIRKRDRIWQIAFGSGFKCNSAVWKALQTVNPAKEKNPWMDEIDNFPVEV 510
>tr|Q1ZZJ8|Q1ZZJ8_TROMA Putative fatty acid elongase OS=Tropaeolum majus PE=4 SV=1 Length = 503
Score = 77.0 bits (188), Expect = 5e-13 Identities = 32/50 (64%), Positives = 39/50 (78%) Frame = +3
Query: 6 RLKKGDKVWQVALGSGFKCNSVVWKVLRDVKPQRGFNPWMECIDNYPVEI 155 R+KKGD+VWQ+A GSGFKCNS VWK LR+V P NPWM+ I +PVE+ Sbjct: 451 RIKKGDRVWQIAFGSGFKCNSAVWKALRNVNPAEEKNPWMDEIHLFPVEV 500
>tr|Q41301|Q41301_SIMCH Beta-ketoacyl-CoA synthase OS=Simmondsia chinensis PE=2 SV=1 Length = 521
Score = 76.6 bits (187), Expect = 6e-13 Identities = 32/56 (57%), Positives = 41/56 (73%) Frame = +3
Query: 6 RLKKGDKVWQVALGSGFKCNSVVWKVLRDVKPQRGFNPWMECIDNYPVEITDKITP 173 R++KGD+ W + GSGFKCNSVVW+ LR V P R NPWM+ I+N+PV + KI P Sbjct: 464 RIRKGDRTWMIGFGSGFKCNSVVWRALRSVNPAREKNPWMDEIENFPVHV-PKIAP 518
>tr|A4VCL7|A4VCL7_ARATH At4g34250 OS=Arabidopsis thaliana PE=2 SV=1 Length = 493
Score = 76.3 bits (186), Expect = 8e-13 Identities = 32/50 (64%), Positives = 39/50 (78%) Frame = +3
Query: 6 RLKKGDKVWQVALGSGFKCNSVVWKVLRDVKPQRGFNPWMECIDNYPVEI 155 R+ KGD++WQ+ALGSGFKCNS VW LR+VKP NPW +C+ YPVEI Sbjct: 439 RMTKGDRIWQIALGSGFKCNSSVWVALRNVKPSTN-NPWEQCLHKYPVEI 487
>tr|A5AYN9|A5AYN9_VITVI Putative uncharacterized protein (Chromosome chr11 scaffold_13, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00016830001 PE=4 SV=1 Length = 511
Score = 75.9 bits (185), Expect = 1e-12 Identities = 30/50 (60%), Positives = 38/50 (76%) Frame = +3
Query: 6 RLKKGDKVWQVALGSGFKCNSVVWKVLRDVKPQRGFNPWMECIDNYPVEI 155 R+KKGD+ WQ+A GSGFKCNS VWK LR + P + NPWM+ ID +PV + Sbjct: 456 RIKKGDRTWQIAFGSGFKCNSAVWKALRTINPAQEKNPWMDEIDMFPVNV 505
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