| DK950263 |
| Clone id |
TST38A01NGRL0008_D03 |
| Library |
TST38 |
| Length |
633 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_D03. 5' end sequence. |
| Accession |
DK950263 |
| Tissue type |
prothallia |
| Developmental stage |
gametophyte |
| Contig ID |
CL2447Contig1 |
| Sequence |
GGAAGATCAAAATCCTGATTATGACCACACAGCAACTGAGTTTGGATCTCTTCATGCAGT GGCTCCACCTGGAACTGTTGATTTGAGGACTACAATGGATGCTCACAGGATATCCATAGA AAACAGCAAGTTTCTTGGTGGTGATGTTGAGCACACTCATCTTGTGAAGGGACTTGATTA TGCGCTGCTGCACAAGGTCCGGAGTGAAATTGACAGAGAACCAGATGATGACAATGATGA AGATGATGCGAAGCGCAGGTCTCAGCAGGAAGAAAATTCAATGGTGTTTCGTACAGCTTC TGCCAAGCTTATTTATCAATGGGTTGTCAAGCCCCAAAATCTCAACAAGACGAATGAAAT GTTCTTGCCAGGAAGAACAGCTTTTGTTTATGATCTGGATGAGGAGTTTTCACATGATAT TCCGACAACATTGCATCGCAGTAAGGCTGATTGCCCAGCTCCACAAGAAATGGTGACTGT GAGTGTGGATAGCAGCGTTCTAGATCGTATTGCAAAAATAATGACCTATCTTCGATTGGG TTCTTCTGGCAAGATCTTGAAGAAGAAGAAGAAAGATAAGAACGATAGCAGTCGTGAAAA ATAGAGTCAAGGGAGTATCCACTCTTCCTACTG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q66HG8 |
| Definition |
sp|Q66HG8|RED_RAT Protein Red OS=Rattus norvegicus |
| Align length |
184 |
| Score (bit) |
129.0 |
| E-value |
1.0e-29 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TRU9 |
| Definition |
tr|A9TRU9|A9TRU9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
180 |
| Score (bit) |
259.0 |
| E-value |
7.0e-68 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950263|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_D03, 5' (633 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TRU9|A9TRU9_PHYPA Predicted protein OS=Physcomitrella paten... 259 7e-68 tr|A9NXF6|A9NXF6_PICSI Putative uncharacterized protein OS=Picea... 251 3e-65 tr|A7PDQ3|A7PDQ3_VITVI Chromosome chr11 scaffold_13, whole genom... 238 2e-61 tr|B7FL99|B7FL99_MEDTR Putative uncharacterized protein (Fragmen... 232 1e-59 tr|A4L9Q6|A4L9Q6_MAIZE Putative splicing factor OS=Zea mays GN=s... 231 4e-59 tr|Q2RAL9|Q2RAL9_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 229 8e-59 tr|B8BJ32|B8BJ32_ORYSI Putative uncharacterized protein OS=Oryza... 229 8e-59 tr|B6TZN1|B6TZN1_MAIZE Putative uncharacterized protein OS=Zea m... 228 2e-58 tr|O48713|O48713_ARATH Putative uncharacterized protein At2g2646... 224 3e-57 tr|A2ZI02|A2ZI02_ORYSI Putative uncharacterized protein OS=Oryza... 176 1e-42 tr|A3C8L6|A3C8L6_ORYSJ Putative uncharacterized protein OS=Oryza... 168 3e-40 tr|Q2QXT7|Q2QXT7_ORYSJ Expressed protein (Putative uncharacteriz... 162 1e-38 tr|B6M7I9|B6M7I9_BRAFL Putative uncharacterized protein OS=Branc... 131 3e-29 tr|Q6DDH4|Q6DDH4_XENLA MGC83922 protein OS=Xenopus laevis GN=MGC... 129 1e-28 tr|Q95H93|Q95H93_MOUSE IK cytokine OS=Mus musculus GN=Ik PE=2 SV=1 129 1e-28 tr|Q8CDT0|Q8CDT0_MOUSE Putative uncharacterized protein (Fragmen... 129 1e-28 tr|Q8C7D0|Q8C7D0_MOUSE Putative uncharacterized protein (Fragmen... 129 1e-28 tr|Q8C2T9|Q8C2T9_MOUSE Putative uncharacterized protein OS=Mus m... 129 1e-28 tr|Q6QI75|Q6QI75_RAT LRRG00133 OS=Rattus norvegicus GN=RGD130564... 129 1e-28 tr|Q3TJY5|Q3TJY5_MOUSE Putative uncharacterized protein (Fragmen... 129 1e-28 tr|Q5R6X5|Q5R6X5_PONAB Putative uncharacterized protein DKFZp459... 128 3e-28 tr|A4FUY8|A4FUY8_BOVIN IK protein OS=Bos taurus GN=IK PE=2 SV=1 128 3e-28 tr|Q9UK43|Q9UK43_HUMAN Chondrosarcoma-associated protein 2 OS=Ho... 128 3e-28 tr|Q6IPD8|Q6IPD8_HUMAN IK cytokine, down-regulator of HLA II OS=... 128 3e-28 tr|Q5ZHM2|Q5ZHM2_CHICK Putative uncharacterized protein OS=Gallu... 127 6e-28 tr|Q860B9|Q860B9_DANRE IK cytokine OS=Danio rerio GN=ik PE=2 SV=1 127 7e-28 tr|Q95HA6|Q95HA6_HUMAN IK cytokine, down-regulator of HLA II OS=... 126 9e-28 tr|Q4T470|Q4T470_TETNG Chromosome undetermined SCAF9792, whole g... 126 1e-27 tr|A7SGH7|A7SGH7_NEMVE Predicted protein OS=Nematostella vectens... 126 1e-27 tr|B2R5Y4|B2R5Y4_HUMAN cDNA, FLJ92684, highly similar to Homo sa... 126 1e-27
>tr|A9TRU9|A9TRU9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_197602 PE=4 SV=1 Length = 592
Score = 259 bits (663), Expect = 7e-68 Identities = 126/180 (70%), Positives = 146/180 (81%) Frame = +2
Query: 2 EDQNPDYDHTATEFGSLHAVAPPGTVDLRTTMDAHRISIENSKFLGGDVEHTHLVKGLDY 181 ED NPDYDHT+ E GSLHA+ PPGT D+R T DAHRISIENSKFLGGDVEHTHLVKGLD+ Sbjct: 47 EDINPDYDHTSAELGSLHALGPPGTADMRLT-DAHRISIENSKFLGGDVEHTHLVKGLDF 105
Query: 182 ALLHKVRSXXXXXXXXXXXXXXAKRRSQQEENSMVFRTASAKLIYQWVVKPQNLNKTNEM 361 ALLHKVRS A +R Q+E+ +M FRTA+AK++YQW+ KPQ ++K N M Sbjct: 106 ALLHKVRSEIDKEPENEDP---ASQRQQKEDQTMAFRTATAKMVYQWICKPQTVSKVNSM 162
Query: 362 FLPGRTAFVYDLDEEFSHDIPTTLHRSKADCPAPQEMVTVSVDSSVLDRIAKIMTYLRLG 541 FLPGRTAFV+D+D EF+HDIPTT+HRSKADCP PQE VTV VD +VL+RIAKIMTYLRLG Sbjct: 163 FLPGRTAFVFDMDGEFAHDIPTTVHRSKADCPPPQETVTVGVDGTVLERIAKIMTYLRLG 222
>tr|A9NXF6|A9NXF6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 660
Score = 251 bits (640), Expect = 3e-65 Identities = 130/180 (72%), Positives = 147/180 (81%) Frame = +2
Query: 2 EDQNPDYDHTATEFGSLHAVAPPGTVDLRTTMDAHRISIENSKFLGGDVEHTHLVKGLDY 181 EDQNPDY+ T+ GSLHAVAPPGTVDLR DAHRISIENSK+LGGDVEHTHLVKGLDY Sbjct: 117 EDQNPDYE--PTDMGSLHAVAPPGTVDLRIA-DAHRISIENSKYLGGDVEHTHLVKGLDY 173
Query: 182 ALLHKVRSXXXXXXXXXXXXXXAKRRSQQEENSMVFRTASAKLIYQWVVKPQNLNKTNEM 361 ALLHKVRS K R Q+E+ + FRTA+AKLIYQW++KPQ++NK NEM Sbjct: 174 ALLHKVRSEIDKKPENEDIAD-GKSRVQKEDQPVSFRTATAKLIYQWMIKPQSMNKPNEM 232
Query: 362 FLPGRTAFVYDLDEEFSHDIPTTLHRSKADCPAPQEMVTVSVDSSVLDRIAKIMTYLRLG 541 FLPGRTAFVY++ EEF HDIPTT+HRSKADCP PQE VTV VD+SVL+RIAKIM+YLRLG Sbjct: 233 FLPGRTAFVYNI-EEFYHDIPTTVHRSKADCPPPQESVTVGVDASVLERIAKIMSYLRLG 291
>tr|A7PDQ3|A7PDQ3_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016370001 PE=4 SV=1 Length = 566
Score = 238 bits (608), Expect = 2e-61 Identities = 122/180 (67%), Positives = 141/180 (78%) Frame = +2
Query: 2 EDQNPDYDHTATEFGSLHAVAPPGTVDLRTTMDAHRISIENSKFLGGDVEHTHLVKGLDY 181 EDQNPDY+ TE GS HAVAPPGTVDLR+T DA++ISIE+SK+LGGDVEHTHLVKGLDY Sbjct: 37 EDQNPDYE--PTELGSFHAVAPPGTVDLRST-DANKISIEHSKYLGGDVEHTHLVKGLDY 93
Query: 182 ALLHKVRSXXXXXXXXXXXXXXAKRRSQQEENSMVFRTASAKLIYQWVVKPQNLNKTNEM 361 ALLHKVRS K R E+ + FRTA+AK +YQW+VKPQ + K+NEM Sbjct: 94 ALLHKVRSEIEKKPEVGDDAD-GKSRVSNEDQPLSFRTATAKSVYQWIVKPQTVVKSNEM 152
Query: 362 FLPGRTAFVYDLDEEFSHDIPTTLHRSKADCPAPQEMVTVSVDSSVLDRIAKIMTYLRLG 541 FLPGR AF++ ++ FS DIPTTLHRSKADCP P+EMVTV VD SVLDRIAKIM+YLRLG Sbjct: 153 FLPGRMAFIFSMEGGFSSDIPTTLHRSKADCPVPEEMVTVGVDGSVLDRIAKIMSYLRLG 212
>tr|B7FL99|B7FL99_MEDTR Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1 Length = 215
Score = 232 bits (592), Expect = 1e-59 Identities = 116/180 (64%), Positives = 139/180 (77%) Frame = +2
Query: 2 EDQNPDYDHTATEFGSLHAVAPPGTVDLRTTMDAHRISIENSKFLGGDVEHTHLVKGLDY 181 EDQNPDY+ T F HAVAPPGTVD+R + DAH++SIE SK+LGGDVEHTHLVKGLDY Sbjct: 37 EDQNPDYEQTELGF---HAVAPPGTVDIRAS-DAHKLSIEKSKYLGGDVEHTHLVKGLDY 92
Query: 182 ALLHKVRSXXXXXXXXXXXXXXAKRRSQQEENSMVFRTASAKLIYQWVVKPQNLNKTNEM 361 ALL+KVRS K R+ +E+ + RTA AK +YQW+VKPQ ++KTNEM Sbjct: 93 ALLNKVRSEIKKPDVGDDGD--GKPRAPKEDQKVSIRTAVAKSVYQWIVKPQTISKTNEM 150
Query: 362 FLPGRTAFVYDLDEEFSHDIPTTLHRSKADCPAPQEMVTVSVDSSVLDRIAKIMTYLRLG 541 FLPGR F+Y+++ + HDIPTTLHRSKADCP P+EMVTV+VD SVLDRIAKIM+YLRLG Sbjct: 151 FLPGRMTFIYNMESGYHHDIPTTLHRSKADCPVPEEMVTVNVDGSVLDRIAKIMSYLRLG 210
>tr|A4L9Q6|A4L9Q6_MAIZE Putative splicing factor OS=Zea mays GN=smu2 PE=2 SV=1 Length = 565
Score = 231 bits (588), Expect = 4e-59 Identities = 117/180 (65%), Positives = 142/180 (78%) Frame = +2
Query: 2 EDQNPDYDHTATEFGSLHAVAPPGTVDLRTTMDAHRISIENSKFLGGDVEHTHLVKGLDY 181 EDQNPDY+ TE GS HAVAPPG DLR DAH+ISIE SK+LGGD+EHTHLVKGLDY Sbjct: 37 EDQNPDYE--PTELGSFHAVAPPGN-DLRLA-DAHKISIEKSKYLGGDLEHTHLVKGLDY 92
Query: 182 ALLHKVRSXXXXXXXXXXXXXXAKRRSQQEENSMVFRTASAKLIYQWVVKPQNLNKTNEM 361 ALLHKVRS K R+ +E+ ++ FRTA+AK +YQW++KPQ++ K NE+ Sbjct: 93 ALLHKVRSEIEKKPEAEDGKD-TKSRAAKEDQAVSFRTATAKSVYQWIIKPQSIIKENEL 151
Query: 362 FLPGRTAFVYDLDEEFSHDIPTTLHRSKADCPAPQEMVTVSVDSSVLDRIAKIMTYLRLG 541 FLPGR +F+Y+++E ++DIPTTLHRSKADCP P+EMVTVSVD SVL+RIAKIMTYLRLG Sbjct: 152 FLPGRMSFIYNMEEGVTNDIPTTLHRSKADCPVPEEMVTVSVDGSVLERIAKIMTYLRLG 211
>tr|Q2RAL9|Q2RAL9_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os11g0146700 PE=2 SV=2 Length = 567
Score = 229 bits (585), Expect = 8e-59 Identities = 117/180 (65%), Positives = 142/180 (78%) Frame = +2
Query: 2 EDQNPDYDHTATEFGSLHAVAPPGTVDLRTTMDAHRISIENSKFLGGDVEHTHLVKGLDY 181 EDQNPDY+ TE GS HAVAPPG DLR DAH+ISIE SK+LGGD+EHTHLVKGLDY Sbjct: 37 EDQNPDYE--PTELGSFHAVAPPGA-DLRLA-DAHKISIEKSKYLGGDLEHTHLVKGLDY 92
Query: 182 ALLHKVRSXXXXXXXXXXXXXXAKRRSQQEENSMVFRTASAKLIYQWVVKPQNLNKTNEM 361 ALLHKVRS + RS +E+ ++ FRTA+AK +YQW++KPQ++ K+NEM Sbjct: 93 ALLHKVRSEIEKKPEAEDGKD-TQSRSTKEDQAVSFRTAAAKSVYQWIIKPQSIIKSNEM 151
Query: 362 FLPGRTAFVYDLDEEFSHDIPTTLHRSKADCPAPQEMVTVSVDSSVLDRIAKIMTYLRLG 541 FLPGR AF+Y++++ ++DIPTTLHRSKADC P+EMVTVSVD SVLDRIAKIM+YLRLG Sbjct: 152 FLPGRMAFIYNMEDGLTNDIPTTLHRSKADCSVPEEMVTVSVDGSVLDRIAKIMSYLRLG 211
>tr|B8BJ32|B8BJ32_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35091 PE=4 SV=1 Length = 556
Score = 229 bits (585), Expect = 8e-59 Identities = 117/180 (65%), Positives = 142/180 (78%) Frame = +2
Query: 2 EDQNPDYDHTATEFGSLHAVAPPGTVDLRTTMDAHRISIENSKFLGGDVEHTHLVKGLDY 181 EDQNPDY+ TE GS HAVAPPG DLR DAH+ISIE SK+LGGD+EHTHLVKGLDY Sbjct: 26 EDQNPDYE--PTELGSFHAVAPPGA-DLRLA-DAHKISIEKSKYLGGDLEHTHLVKGLDY 81
Query: 182 ALLHKVRSXXXXXXXXXXXXXXAKRRSQQEENSMVFRTASAKLIYQWVVKPQNLNKTNEM 361 ALLHKVRS + RS +E+ ++ FRTA+AK +YQW++KPQ++ K+NEM Sbjct: 82 ALLHKVRSEIEKKPEAEDGKD-TQSRSTKEDQAVSFRTAAAKSVYQWIIKPQSIIKSNEM 140
Query: 362 FLPGRTAFVYDLDEEFSHDIPTTLHRSKADCPAPQEMVTVSVDSSVLDRIAKIMTYLRLG 541 FLPGR AF+Y++++ ++DIPTTLHRSKADC P+EMVTVSVD SVLDRIAKIM+YLRLG Sbjct: 141 FLPGRMAFIYNMEDGLTNDIPTTLHRSKADCSVPEEMVTVSVDGSVLDRIAKIMSYLRLG 200
>tr|B6TZN1|B6TZN1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 565
Score = 228 bits (582), Expect = 2e-58 Identities = 115/180 (63%), Positives = 141/180 (78%) Frame = +2
Query: 2 EDQNPDYDHTATEFGSLHAVAPPGTVDLRTTMDAHRISIENSKFLGGDVEHTHLVKGLDY 181 EDQNPDY+ TE GS HAVAPPG DLR DAH+ISIE SK+LGGD+EHTHLVKGLDY Sbjct: 37 EDQNPDYE--PTELGSFHAVAPPGN-DLRLA-DAHKISIEKSKYLGGDLEHTHLVKGLDY 92
Query: 182 ALLHKVRSXXXXXXXXXXXXXXAKRRSQQEENSMVFRTASAKLIYQWVVKPQNLNKTNEM 361 ALLHK+RS R ++ E+ ++ FRTA+AK +YQW++KPQ++ K NE+ Sbjct: 93 ALLHKIRSEIEKKPEAEDGKDTTSRAAK-EDQAVSFRTATAKSVYQWIIKPQSIIKENEL 151
Query: 362 FLPGRTAFVYDLDEEFSHDIPTTLHRSKADCPAPQEMVTVSVDSSVLDRIAKIMTYLRLG 541 FLPGR +F+Y+++E ++DIPTTLHRSKADCP P+EMVTVSVD SVL+RIAKIMTYLRLG Sbjct: 152 FLPGRMSFIYNMEEGVTNDIPTTLHRSKADCPVPEEMVTVSVDGSVLERIAKIMTYLRLG 211
>tr|O48713|O48713_ARATH Putative uncharacterized protein At2g26460 (At2g26460) OS=Arabidopsis thaliana GN=At2g26460 PE=2 SV=1 Length = 585
Score = 224 bits (572), Expect = 3e-57 Identities = 114/180 (63%), Positives = 137/180 (76%) Frame = +2
Query: 2 EDQNPDYDHTATEFGSLHAVAPPGTVDLRTTMDAHRISIENSKFLGGDVEHTHLVKGLDY 181 E+QNPDYD +E S HAVAPPG VD+R DA +ISIENSK+LGGDVEHTHLVKGLDY Sbjct: 37 ENQNPDYD--PSELSSFHAVAPPGAVDIRAA-DALKISIENSKYLGGDVEHTHLVKGLDY 93
Query: 182 ALLHKVRSXXXXXXXXXXXXXXAKRRSQQEENSMVFRTASAKLIYQWVVKPQNLNKTNEM 361 ALL+KVRS K + +E+ + FRT +AK +YQW+VKPQ + K+NEM Sbjct: 94 ALLNKVRSEIVKKPDGEDGDG-GKTSAPKEDQRVTFRTIAAKSVYQWIVKPQTIIKSNEM 152
Query: 362 FLPGRTAFVYDLDEEFSHDIPTTLHRSKADCPAPQEMVTVSVDSSVLDRIAKIMTYLRLG 541 FLPGR FVYD++ ++HDIPTTL+RSKADCP P+E VTV+VD SVLDRIAKIM+YLRLG Sbjct: 153 FLPGRMTFVYDMEGGYTHDIPTTLYRSKADCPVPEEFVTVNVDGSVLDRIAKIMSYLRLG 212
>tr|A2ZI02|A2ZI02_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37441 PE=4 SV=1 Length = 543
Score = 176 bits (445), Expect = 1e-42 Identities = 99/180 (55%), Positives = 121/180 (67%) Frame = +2
Query: 2 EDQNPDYDHTATEFGSLHAVAPPGTVDLRTTMDAHRISIENSKFLGGDVEHTHLVKGLDY 181 EDQN DY+ TE GS HAVAPPG DLR D H+ISIE SK+LGGD+EHTHLVKGLDY Sbjct: 37 EDQNLDYE--PTELGSFHAVAPPGA-DLRLA-DVHKISIEKSKYLGGDLEHTHLVKGLDY 92
Query: 182 ALLHKVRSXXXXXXXXXXXXXXAKRRSQQEENSMVFRTASAKLIYQWVVKPQNLNKTNEM 361 ALLHKVRS + RS +E+ ++ FRTA+AK +Y+W++KPQ++ K+NEM Sbjct: 93 ALLHKVRS-EIEKKPDAEDGKDTQTRSTKEDQAVSFRTATAKSVYKWIIKPQSIIKSNEM 151
Query: 362 FLPGRTAFVYDLDEEFSHDIPTTLHRSKADCPAPQEMVTVSVDSSVLDRIAKIMTYLRLG 541 FLPG+ AF+Y++ EMVTVSVD SVLDRIAKIM+YLRLG Sbjct: 152 FLPGQMAFIYNM-----------------------EMVTVSVDGSVLDRIAKIMSYLRLG 188
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