DK950285 |
Clone id |
TST38A01NGRL0008_E01 |
Library |
TST38 |
Length |
667 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_E01. 5' end sequence. |
Accession |
DK950285 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL230Contig1 |
Sequence |
ACACACGCACGCAACAGGTTTCTCCTCTCTTATTTTGTACATCTGTGTATTTTAGCACTC GCAGCTTCAAGTCATGGTGTTTGGCAAGGCAAAGAATGCGGCTCTGCAAGTGGTTAAAGG TGTAGACCTTGAGCGCTACCAAGGAAAATGGTATGAGATAGCCAACCTTCCGTCGCGTTT CCAACCTAAAGGAGGCAAGAACACAACTGCGACATACACTTTGCAGCCTGATGGTACCAT CCATGTCTTGAATGAGACCTGGCTCGATGGGAAACGAGCCTCCATTGAAGGTTCTGCATG GAAGGTTGATCCCAACAGTGACGAAGCGAAGTTGAAAGTTCGTTTTTGGCTGCCCCCTTT CCTTCCCCTCTTTCCTGTGAATGGCGATTACTGGGTTATGGTCCTTGATTCGGAGTACCG ATGGGCTCTCGTCGGCCAGCCCTCAAGGAATTACCTTTGGGTTCTGAGTCGGACCCCACA GTTGAGTGATGATGTATATGCAGACTTGCTGGCACATGCCGAGAAGGAAGGATATGATGT CTCTCAGGTGAGAAAGACAATTCAGGATGAAGCTGCTGACTCGAGTAATCTGGAAGTGGC AAAGAAGCTGTCAGATGATCAGGGCACGTGGTGGCTGAAATCGGTGCTTGGCAAGTAAAT GCTCTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P0A901 |
Definition |
sp|P0A901|BLC_ECOLI Outer membrane lipoprotein blc OS=Escherichia coli (strain K12) |
Align length |
148 |
Score (bit) |
101.0 |
E-value |
4.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950285|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_E01, 5' (667 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P0A901|BLC_ECOLI Outer membrane lipoprotein blc OS=Escherichi... 101 4e-21 sp|P0A902|BLC_ECO57 Outer membrane lipoprotein blc OS=Escherichi... 101 4e-21 sp|Q46036|BLC_CITFR Outer membrane lipoprotein blc OS=Citrobacte... 99 2e-20 sp|Q08790|BLC_VIBCH Outer membrane lipoprotein blc OS=Vibrio cho... 75 2e-13 sp|Q5URA7|YR877_MIMIV Putative lipocalin R877 OS=Acanthamoeba po... 70 8e-12 sp|P05090|APOD_HUMAN Apolipoprotein D OS=Homo sapiens GN=APOD PE... 64 9e-10 sp|P51910|APOD_MOUSE Apolipoprotein D OS=Mus musculus GN=Apod PE... 62 2e-09 sp|P23593|APOD_RAT Apolipoprotein D OS=Rattus norvegicus GN=Apod... 60 8e-09 sp|Q8SPI0|APOD_MACFA Apolipoprotein D OS=Macaca fascicularis GN=... 58 4e-08 sp|P51909|APOD_CAVPO Apolipoprotein D OS=Cavia porcellus GN=APOD... 58 4e-08 sp|Q32KY0|APOD_BOVIN Apolipoprotein D OS=Bos taurus GN=APOD PE=2... 57 9e-08 sp|P37153|APOD_RABIT Apolipoprotein D OS=Oryctolagus cuniculus G... 51 5e-06 sp|P09464|BBP_PIEBR Bilin-binding protein OS=Pieris brassicae PE... 40 0.009 sp|P49291|LAZA_SCHAM Lazarillo protein OS=Schistocerca americana... 37 0.073 sp|P33433|HRG_BOVIN Histidine-rich glycoprotein (Fragments) OS=B... 36 0.16 sp|Q5R5N6|BGLR_PONAB Beta-glucuronidase OS=Pongo abelii GN=GUSB ... 35 0.47 sp|P24775|RETB2_ONCMY Plasma retinol-binding protein 2 OS=Oncorh... 34 0.61 sp|P26675|SOS_DROME Protein son of sevenless OS=Drosophila melan... 33 1.0 sp|Q128E7|PYRG_POLSJ CTP synthase OS=Polaromonas sp. (strain JS6... 33 1.0 sp|P70271|PDLI4_MOUSE PDZ and LIM domain protein 4 OS=Mus muscul... 33 1.4 sp|Q9PVZ9|ESR1_SPAAU Estrogen receptor OS=Sparus aurata GN=esr1 ... 33 1.4 sp|Q68EI3|CBPC5_DANRE Cytosolic carboxypeptidase-like protein 5 ... 33 1.4 sp|P08236|BGLR_HUMAN Beta-glucuronidase OS=Homo sapiens GN=GUSB ... 33 1.4 sp|P50221|MEOX1_HUMAN Homeobox protein MOX-1 OS=Homo sapiens GN=... 33 1.8 sp|P36202|PDLI4_RAT PDZ and LIM domain protein 4 OS=Rattus norve... 32 2.3 sp|P08938|PURP_CHICK Purpurin OS=Gallus gallus PE=1 SV=1 32 2.3 sp|Q5ECE3|LOPAP_LONON Lopap OS=Lonomia obliqua PE=1 SV=2 32 2.3 sp|P02755|LACB_BUBBU Beta-lactoglobulin OS=Bubalus bubalis GN=LG... 32 2.3 sp|P02754|LACB_BOVIN Beta-lactoglobulin OS=Bos taurus GN=LGB PE=... 32 2.3 sp|P02756|LACB_CAPHI Beta-lactoglobulin OS=Capra hircus GN=LGB P... 32 3.0
>sp|P0A901|BLC_ECOLI Outer membrane lipoprotein blc OS=Escherichia coli (strain K12) GN=blc PE=1 SV=1 Length = 177
Score = 101 bits (251), Expect = 4e-21 Identities = 63/148 (42%), Positives = 86/148 (58%), Gaps = 2/148 (1%) Frame = +2
Query: 110 VVKGVDLERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLD--GKRAS 283 VV D +RY G WYEIA RF+ +G + TATY+L+ DG ++V+N+ + G Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ 88
Query: 284 IEGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSRNYLWV 463 EG A+ + A LKV G Y V+ LD EYR ALV P R+YLW+ Sbjct: 89 SEGKAYFTGAPT-RAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 140
Query: 464 LSRTPQLSDDVYADLLAHAEKEGYDVSQ 547 LSRTP +SD+V ++LA A +EG+DVS+ Sbjct: 141 LSRTPTISDEVKQEMLAVATREGFDVSK 168
>sp|P0A902|BLC_ECO57 Outer membrane lipoprotein blc OS=Escherichia coli O157:H7 GN=blc PE=3 SV=1 Length = 177
Score = 101 bits (251), Expect = 4e-21 Identities = 63/148 (42%), Positives = 86/148 (58%), Gaps = 2/148 (1%) Frame = +2
Query: 110 VVKGVDLERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLD--GKRAS 283 VV D +RY G WYEIA RF+ +G + TATY+L+ DG ++V+N+ + G Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ 88
Query: 284 IEGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSRNYLWV 463 EG A+ + A LKV G Y V+ LD EYR ALV P R+YLW+ Sbjct: 89 SEGKAYFTGAPT-RAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 140
Query: 464 LSRTPQLSDDVYADLLAHAEKEGYDVSQ 547 LSRTP +SD+V ++LA A +EG+DVS+ Sbjct: 141 LSRTPTISDEVKQEMLAVATREGFDVSK 168
>sp|Q46036|BLC_CITFR Outer membrane lipoprotein blc OS=Citrobacter freundii PE=3 SV=1 Length = 177
Score = 99.0 bits (245), Expect = 2e-20 Identities = 62/150 (41%), Positives = 88/150 (58%), Gaps = 3/150 (2%) Frame = +2
Query: 110 VVKGVDLERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLDGKRA--S 283 VV D +RY G WYEIA RF+ +G TATY+L+ DG I+V+N+ + + Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFE-RGLDKVTATYSLRDDGGINVINKGYNPDREMWQK 88
Query: 284 IEGSAWKV-DPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSRNYLW 460 EG A+ DP++ A LKV G Y V+ LD EYR ALV P R+YLW Sbjct: 89 TEGKAYFTGDPST--AALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLW 139
Query: 461 VLSRTPQLSDDVYADLLAHAEKEGYDVSQV 550 +LSRTP +SD++ +LA A +EG++V+++ Sbjct: 140 ILSRTPTISDEMKQQMLAIATREGFEVNKL 169
>sp|Q08790|BLC_VIBCH Outer membrane lipoprotein blc OS=Vibrio cholerae GN=blc PE=3 SV=2 Length = 171
Score = 75.5 bits (184), Expect = 2e-13 Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 3/153 (1%) Frame = +2
Query: 101 ALQVVKGVDLERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLD--GK 274 +++ V +L Y GKWYE+A L F+ +G TA Y ++ DG I VLN + + G+ Sbjct: 22 SVKPVSDFELNNYLGKWYEVARLDHSFE-RGLSQVTAEYRVRNDGGISVLNRGYSEEKGE 80
Query: 275 RASIEGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSE-YRWALVGQPSRN 451 EG A+ V+ ++D LKV G Y V LD E Y +A V P+ Sbjct: 81 WKEAEGKAYFVNGSTD-GYLKVSFFGPFY-------GSYVVFELDRENYSYAFVSGPNTE 132
Query: 452 YLWVLSRTPQLSDDVYADLLAHAEKEGYDVSQV 550 YLW+LSRTP + + + +++ G+D +++ Sbjct: 133 YLWLLSRTPTVERGILDKFIEMSKERGFDTNRL 165
>sp|Q5URA7|YR877_MIMIV Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R877 PE=1 SV=1 Length = 169
Score = 70.5 bits (171), Expect = 8e-12 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 6/149 (4%) Frame = +2
Query: 122 VDLERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLDGKRASIEGSAW 301 +D++RY G WYEIA LP+ FQ KG N+TA Y L I V N ++G+ S+ G+A Sbjct: 28 LDIQRYMGTWYEIARLPTSFQ-KGCVNSTANYQLLEPNKIQVTNNCEINGRINSVTGTAI 86
Query: 302 K------VDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSRNYLWV 463 V A L V Y V+ +D Y++A+V + LW+ Sbjct: 87 PAANTRIVSGFLTPASLMVNFGYGF--------SPYNVIFIDENYQYAIV-SGGNDTLWI 137
Query: 464 LSRTPQLSDDVYADLLAHAEKEGYDVSQV 550 LSR ++ Y L+ +GYDV+ + Sbjct: 138 LSRFKNINQSTYNQLVTIVYNQGYDVNNL 166
>sp|P05090|APOD_HUMAN Apolipoprotein D OS=Homo sapiens GN=APOD PE=1 SV=1 Length = 189
Score = 63.5 bits (153), Expect = 9e-10 Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 8/174 (4%) Frame = +2
Query: 68 QVMVFGKAKNAALQVVKGVDLERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHV 247 Q GK N +Q + D+ +Y G+WYEI +P+ F+ G+ A Y+L +G I V Sbjct: 21 QAFHLGKCPNPPVQ--ENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLMENGKIKV 76
Query: 248 LN-ETWLDGKRASIEGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRW 424 LN E DG IEG A V+ ++ AKL+V+ + YW++ D E + Sbjct: 77 LNQELRADGTVNQIEGEATPVN-LTEPAKLEVKFSWFMP------SAPYWILATDYE-NY 128
Query: 425 ALVGQPS-------RNYLWVLSRTPQLSDDVYADLLAHAEKEGYDVSQVRKTIQ 565 ALV + ++ W+L+R P L + L DV ++ T Q Sbjct: 129 ALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQ 182
>sp|P51910|APOD_MOUSE Apolipoprotein D OS=Mus musculus GN=Apod PE=2 SV=1 Length = 189
Score = 62.4 bits (150), Expect = 2e-09 Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 8/165 (4%) Frame = +2
Query: 110 VVKGVDLERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLN-ETWLDGKRASI 286 V + D+++Y G+WYEI +P+ F+ G A Y+L +G I VLN E DG + Sbjct: 33 VQENFDVKKYLGRWYEIEKIPASFEK--GNCIQANYSLMENGNIEVLNKELSPDGTMNQV 90
Query: 287 EGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSR------ 448 +G A K S+ AKL+V+ YW++ D E +ALV + Sbjct: 91 KGEA-KQSNVSEPAKLEVQFFPLMPP------APYWILATDYE-NYALVYSCTTFFWLFH 142
Query: 449 -NYLWVLSRTPQLSDDVYADLLAHAEKEGYDVSQVRKTIQDEAAD 580 +++W+L R P L + L G D+ ++ T Q D Sbjct: 143 VDFVWILGRNPYLPPETITYLKDILTSNGIDIEKMTTTDQANCPD 187
>sp|P23593|APOD_RAT Apolipoprotein D OS=Rattus norvegicus GN=Apod PE=1 SV=1 Length = 189
Score = 60.5 bits (145), Expect = 8e-09 Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 8/163 (4%) Frame = +2
Query: 110 VVKGVDLERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLN-ETWLDGKRASI 286 V + D+++Y G+WYEI +P F+ G A Y+L +G I VLN E DG + Sbjct: 33 VQENFDVKKYLGRWYEIEKIPVSFEK--GNCIQANYSLMENGNIKVLNKELRPDGTLNQV 90
Query: 287 EGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSR------ 448 EG A K S+ AKL+V+ YW++ D E +ALV + Sbjct: 91 EGEA-KQSNMSEPAKLEVQFFSLMPP------APYWILATDYE-SYALVYSCTTFFWFFH 142
Query: 449 -NYLWVLSRTPQLSDDVYADLLAHAEKEGYDVSQVRKTIQDEA 574 +Y+W+L R P L + L D++++ T +D+A Sbjct: 143 VDYVWILGRNPYLPPETITYLKYILTSNDIDIAKI--TTKDQA 183
>sp|Q8SPI0|APOD_MACFA Apolipoprotein D OS=Macaca fascicularis GN=APOD PE=2 SV=1 Length = 189
Score = 58.2 bits (139), Expect = 4e-08 Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 8/177 (4%) Frame = +2
Query: 80 FGKAKNAALQVVKGVDLERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLN-E 256 F K + V + D +Y G+WYEI +P+ F+ G+ A Y+L+ +G I VLN E Sbjct: 23 FRLGKCTSPPVQENFDPNKYFGRWYEIEKIPTTFEK--GRCIQANYSLKENGKIKVLNQE 80
Query: 257 TWLDGKRASIEGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVG 436 DG IEG A V+ ++ AKL+V+ + YWV+ D E +ALV Sbjct: 81 LRADGTVNQIEGEASPVN-ITEPAKLEVKFFWFMP------SAPYWVLATDYE-NYALVY 132
Query: 437 QPSR-------NYLWVLSRTPQLSDDVYADLLAHAEKEGYDVSQVRKTIQDEAADSS 586 +Y W+L+R L + L DV ++ T Q+ + S Sbjct: 133 SCVSIINLFRVDYAWILARNRHLPSETVDFLKNILTSNNIDVKKMTVTDQENCPEFS 189
>sp|P51909|APOD_CAVPO Apolipoprotein D OS=Cavia porcellus GN=APOD PE=2 SV=1 Length = 189
Score = 58.2 bits (139), Expect = 4e-08 Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 8/179 (4%) Frame = +2
Query: 68 QVMVFGKAKNAALQVVKGVDLERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHV 247 Q FGK N +Q + DL +Y G+WYEI +P F+ G A Y+L+ +G + V Sbjct: 21 QAFHFGKCPNPPVQ--ENFDLNKYLGRWYEIEKIPVSFEK--GNCIQANYSLKENGRVKV 76
Query: 248 LN-ETWLDGKRASIEGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRW 424 LN E DG IEG A + ++ AKL V+ + YWV+ D + + Sbjct: 77 LNQELRPDGTVNQIEGEATHSN-ITEPAKLGVKFFQLMP------SAPYWVLATDYD-NY 128
Query: 425 ALVGQPSR-------NYLWVLSRTPQLSDDVYADLLAHAEKEGYDVSQVRKTIQDEAAD 580 ALV + +++W+L R L + L D+ ++ T Q D Sbjct: 129 ALVYSCTNIIWLFHVDHIWILGRNRYLPQETVTYLKDILTSNNIDIEKMTLTDQANCPD 187
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q38JB9 |
Definition |
tr|Q38JB9|Q38JB9_POPTM Temperature-induced lipocalin OS=Populus tremuloides |
Align length |
189 |
Score (bit) |
224.0 |
E-value |
5.0e-57 |
Report |
|