DK950295
Clone id TST38A01NGRL0008_E12
Library
Length 679
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_E12. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GTGAGCCTTTGATATGGCAACAATGGCGGCTGCAGCGCTTTCTTCAAGCACCTTCGCCGG
CCAGGCTGTGTATAAGCCCCAGAGCGAGCTGAGCTCTAAGGTAGGCAATGTGGGCGAGGC
CCGCGTGTCCATGAGGAAAACAGTGTCAAAGAGCTCCGACAGCCCCTGGTATGGCCCCGA
CCGCGTGAAGTACCTTGGCCCTTTCTCCGGCGAGGCCCCCAGCTATCTCAAGGGAGAATT
TCCCGGCGACTACGGCTGGGACACCGCCGGCCTGTCTGCCGACCCTGAGACCTTCGCCAA
GAACCGGGAGCTGGAGGTGATTCACGCACGGTGGGCTATGTTGGGAGCCCTGGGCTGCGT
GACCCCCGAGCTGCTGGCCAAGAATGGTGTGAAGTTTGGCGAGGCCGTGTGGTTCAAGGC
TGGCTCGCAGATCTTTGCTGAGGGTGGGCTTGACTACTTGGGCAACCCCAGCCTCGTCCA
CGCTCAGAGCATTCTGGCCATCTGGGCATGTCAGGTAATTCTCATGGGCGCTGTTGAGGG
ATACAGAGTGGCAGGTGGGCCCCTGGGCGAGGTGGAGGATCCCATCTACCCTGGTGGCTC
CTTTGACCCCTTGGGCCTGGCAGACGACCCGGAGGCATTTGCTGAGCTGAAGGTGAAGGA
ACTGAAAAACGGCCGTCTG
■■Homology search results ■■ -
sp_hit_id P12329
Definition sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
Align length 198
Score (bit) 367.0
E-value 1.0e-101
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950295|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_E12, 5'
(679 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 367 e-101
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 363 e-100
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 363 e-100
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 363 e-100
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 362 e-100
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 362 1e-99
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 361 2e-99
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 360 3e-99
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 360 3e-99
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 360 4e-99
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 360 4e-99
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 360 5e-99
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 358 1e-98
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 358 1e-98
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 358 1e-98
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 357 4e-98
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 357 4e-98
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 356 7e-98
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 356 7e-98
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 356 7e-98
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 355 1e-97
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 355 1e-97
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 355 1e-97
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 354 2e-97
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas... 354 3e-97
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 353 4e-97
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop... 353 4e-97
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 353 5e-97
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas... 353 5e-97
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 352 8e-97

>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
Length = 262

Score = 367 bits (942), Expect = e-101
Identities = 174/198 (87%), Positives = 186/198 (93%), Gaps = 4/198 (2%)
Frame = +2

Query: 98 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 265
KVG+ GE R++MRKTV K +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19 KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 266 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 445
AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 446 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 625
GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 626 DPEAFAELKVKELKNGRL 679
DPEAFAELKVKELKNGRL
Sbjct: 199 DPEAFAELKVKELKNGRL 216


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
OS=Physcomitrella patens PE=3 SV=1
Length = 269

Score = 363 bits (933), Expect = e-100
Identities = 179/210 (85%), Positives = 195/210 (92%), Gaps = 3/210 (1%)
Frame = +2

Query: 59 GQAVYKPQSELSSKV-GNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 229
GQ++ KP +ELS KV GNV EARV+MR+TVSKS SD+ WYG DR K+LGPFSGE PSYL
Sbjct: 14 GQSLVKPVNELSRKVLGNV-EARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYL 72

Query: 230 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 409
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAV
Sbjct: 73 NGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAV 132

Query: 410 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 589
WFKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIY
Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIY 192

Query: 590 PGGSFDPLGLADDPEAFAELKVKELKNGRL 679
PGGSFDPLGLADDP+ FAELKVKE+KNGRL
Sbjct: 193 PGGSFDPLGLADDPDTFAELKVKEIKNGRL 222



Score = 30.8 bits (68), Expect = 6.9
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2

Query: 239 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 388
+PG +D GL+ DP+TFA+ + E+ + R AM G ++ G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
SV=1
Length = 265

Score = 363 bits (933), Expect = e-100
Identities = 182/203 (89%), Positives = 185/203 (91%), Gaps = 1/203 (0%)
Frame = +2

Query: 74 KPQSELSSKVGNVGEARVSMRKTVSKS-SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 250
KP +ELS KVG GEARV M SK+ S S WYG DR YLGPFSG PSYL GEFPGD
Sbjct: 18 KPVNELSRKVG-AGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGD 76

Query: 251 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 430
YGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ
Sbjct: 77 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 136

Query: 431 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 610
IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP
Sbjct: 137 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 196

Query: 611 LGLADDPEAFAELKVKELKNGRL 679
LGLADDPEAFAELKVKELKNGRL
Sbjct: 197 LGLADDPEAFAELKVKELKNGRL 219


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
Length = 265

Score = 363 bits (931), Expect = e-100
Identities = 174/191 (91%), Positives = 182/191 (95%), Gaps = 2/191 (1%)
Frame = +2

Query: 113 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 286
G RVSMRKTV+K +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29 GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 287 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 466
ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 467 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAE 646
PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLA+DPEAFAE
Sbjct: 149 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAE 208

Query: 647 LKVKELKNGRL 679
LKVKE+KNGRL
Sbjct: 209 LKVKEIKNGRL 219


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
OS=Spinacia oleracea PE=1 SV=1
Length = 267

Score = 362 bits (930), Expect = e-100
Identities = 172/194 (88%), Positives = 181/194 (93%), Gaps = 4/194 (2%)
Frame = +2

Query: 110 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 277
+GE R++MRKT K S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLS
Sbjct: 28 IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87

Query: 278 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 457
ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDY
Sbjct: 88 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 147

Query: 458 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEA 637
LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEA
Sbjct: 148 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEA 207

Query: 638 FAELKVKELKNGRL 679
FAELKVKE+KNGRL
Sbjct: 208 FAELKVKEIKNGRL 221


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255

Score = 362 bits (928), Expect = 1e-99
Identities = 173/191 (90%), Positives = 181/191 (94%), Gaps = 2/191 (1%)
Frame = +2

Query: 113 GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 286
G A+ +MRKT SKS S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADP
Sbjct: 19 GNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 78

Query: 287 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 466
ETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 79 ETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 138

Query: 467 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAE 646
PSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYPGGSFDPLGLADDPEAFAE
Sbjct: 139 PSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAE 198

Query: 647 LKVKELKNGRL 679
LKVKELKNGRL
Sbjct: 199 LKVKELKNGRL 209


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
Length = 267

Score = 361 bits (926), Expect = 2e-99
Identities = 172/193 (89%), Positives = 181/193 (93%), Gaps = 4/193 (2%)
Frame = +2

Query: 113 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 280
G RV+MRKT +K SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29 GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 281 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 460
DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 461 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAF 640
GNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDPEAF
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAF 208

Query: 641 AELKVKELKNGRL 679
AELKVKE+KNGRL
Sbjct: 209 AELKVKEIKNGRL 221


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
Length = 265

Score = 360 bits (925), Expect = 3e-99
Identities = 176/210 (83%), Positives = 189/210 (90%), Gaps = 3/210 (1%)
Frame = +2

Query: 59 GQAVYKPQSELSSKVGNV-GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 229
GQAV +LS + G R++MRK V+KS S SPWYGPDRVKYLGPFSGE+PSYL
Sbjct: 15 GQAV-----KLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYL 69

Query: 230 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 409
GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAV
Sbjct: 70 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 129

Query: 410 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 589
WFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+Y
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLY 189

Query: 590 PGGSFDPLGLADDPEAFAELKVKELKNGRL 679
PGGSFDPLGLA+DPEAFAELKVKE+KNGRL
Sbjct: 190 PGGSFDPLGLAEDPEAFAELKVKEIKNGRL 219


>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25,
chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1
Length = 266

Score = 360 bits (925), Expect = 3e-99
Identities = 177/211 (83%), Positives = 187/211 (88%), Gaps = 4/211 (1%)
Frame = +2

Query: 59 GQAVYKPQSELSSKVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSY 226
G+AV P S + G + +MRKTV+K SS SPWYGPDRVKYLGPFSGEAPSY
Sbjct: 15 GKAVNVPSSSQIT-----GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSY 69

Query: 227 LKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEA 406
L GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL A+NGVKFGEA
Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEA 129

Query: 407 VWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 586
VWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+
Sbjct: 130 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPL 189

Query: 587 YPGGSFDPLGLADDPEAFAELKVKELKNGRL 679
YPGGSFDPLGLADDPEAFAELKVKE+KNGRL
Sbjct: 190 YPGGSFDPLGLADDPEAFAELKVKEIKNGRL 220


>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7,
chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1
Length = 267

Score = 360 bits (924), Expect = 4e-99
Identities = 172/193 (89%), Positives = 180/193 (93%), Gaps = 4/193 (2%)
Frame = +2

Query: 113 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 280
G + MRKTV+K SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSA
Sbjct: 29 GNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSA 88

Query: 281 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 460
DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 461 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAF 640
GNPSLVHAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YPGGSFDPLGLADDPEAF
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAF 208

Query: 641 AELKVKELKNGRL 679
AELKVKE+KNGRL
Sbjct: 209 AELKVKEIKNGRL 221


tr_hit_id A9RNP2
Definition tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 207
Score (bit) 375.0
E-value 1.0e-102
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950295|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_E12, 5'
(679 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 375 e-102
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ... 372 e-102
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco... 370 e-101
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten... 370 e-101
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 370 e-101
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten... 369 e-101
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 367 e-100
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ... 367 e-100
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten... 367 e-100
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten... 366 e-100
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 365 1e-99
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ... 365 2e-99
tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ... 364 2e-99
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 364 2e-99
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor... 364 3e-99
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb... 363 4e-99
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ... 363 5e-99
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 363 5e-99
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 363 5e-99
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome... 363 5e-99
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC... 363 5e-99
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ... 363 7e-99
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ... 362 9e-99
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC... 362 9e-99
tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin... 362 1e-98
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu... 362 1e-98
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC... 362 1e-98
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu... 362 2e-98
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O... 362 2e-98
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb... 362 2e-98

>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
Length = 265

Score = 375 bits (962), Expect = e-102
Identities = 182/207 (87%), Positives = 193/207 (93%)
Frame = +2

Query: 59 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 238
GQ++ KP +ELS KVGNV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GE
Sbjct: 14 GQSLLKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGE 72

Query: 239 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 418
F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 73 FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 132

Query: 419 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 598
AG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYPGG
Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGG 192

Query: 599 SFDPLGLADDPEAFAELKVKELKNGRL 679
SFDPLGLADDP+ FAELKVKE+KNGRL
Sbjct: 193 SFDPLGLADDPDTFAELKVKEIKNGRL 219


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
Length = 270

Score = 372 bits (956), Expect = e-102
Identities = 182/212 (85%), Positives = 194/212 (91%), Gaps = 5/212 (2%)
Frame = +2

Query: 59 GQAVYKPQSELSSKVGNV-GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPS 223
GQ V KPQ+E VG V GE R++MRKT SK SS SPWYGPDRVKYLGPFSGEAPS
Sbjct: 16 GQIVLKPQNEF---VGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPS 72

Query: 224 YLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 403
YL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGE
Sbjct: 73 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 132

Query: 404 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDP 583
AVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DP
Sbjct: 133 AVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDP 192

Query: 584 IYPGGSFDPLGLADDPEAFAELKVKELKNGRL 679
IYPGGSFDPLGLADDP+AFAELKVKELKNGRL
Sbjct: 193 IYPGGSFDPLGLADDPDAFAELKVKELKNGRL 224


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
OS=Physcomitrella patens PE=2 SV=1
Length = 268

Score = 370 bits (951), Expect = e-101
Identities = 182/209 (87%), Positives = 194/209 (92%), Gaps = 2/209 (0%)
Frame = +2

Query: 59 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 232
GQA+ KP SELS KV N GEARV+MRKTVSKSS DS WYG DR K+LGPFSGE PSYL
Sbjct: 15 GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 233 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 412
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 413 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 592
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193

Query: 593 GGSFDPLGLADDPEAFAELKVKELKNGRL 679
GGSFDPLGLADDP+ FAELKVKE+KNGRL
Sbjct: 194 GGSFDPLGLADDPDTFAELKVKEIKNGRL 222


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
Length = 268

Score = 370 bits (951), Expect = e-101
Identities = 182/209 (87%), Positives = 194/209 (92%), Gaps = 2/209 (0%)
Frame = +2

Query: 59 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 232
GQA+ KP SELS KV N GEARV+MRKTVSKSS DS WYG DR K+LGPFSGE PSYL
Sbjct: 15 GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 233 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 412
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 413 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 592
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193

Query: 593 GGSFDPLGLADDPEAFAELKVKELKNGRL 679
GGSFDPLGLADDP+ FAELKVKE+KNGRL
Sbjct: 194 GGSFDPLGLADDPDTFAELKVKEIKNGRL 222


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
Length = 267

Score = 370 bits (949), Expect = e-101
Identities = 181/209 (86%), Positives = 194/209 (92%), Gaps = 2/209 (0%)
Frame = +2

Query: 59 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 232
GQ V KP +ELS KVGNV EARV+MR+TVSKS SDS WYG DR K+LGPFSGE PSYL
Sbjct: 14 GQGVLKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLT 72

Query: 233 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 412
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 413 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 592
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 593 GGSFDPLGLADDPEAFAELKVKELKNGRL 679
GGSFDPLGLADDP+ FAELKVKE+KNGRL
Sbjct: 193 GGSFDPLGLADDPDTFAELKVKEIKNGRL 221


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
Length = 267

Score = 369 bits (948), Expect = e-101
Identities = 180/209 (86%), Positives = 195/209 (93%), Gaps = 2/209 (0%)
Frame = +2

Query: 59 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 232
GQ++ KP +ELS KVGNV EARV+MR+TVSKS SDS WYG DR K+LGPFSGE PSYL
Sbjct: 14 GQSLVKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 233 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 412
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 413 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 592
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 593 GGSFDPLGLADDPEAFAELKVKELKNGRL 679
GGSFDPLGLADDP+ FAELKVKE+KNGRL
Sbjct: 193 GGSFDPLGLADDPDTFAELKVKEIKNGRL 221


>tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea
mays PE=2 SV=1
Length = 262

Score = 367 bits (942), Expect = e-100
Identities = 174/198 (87%), Positives = 186/198 (93%), Gaps = 4/198 (2%)
Frame = +2

Query: 98 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 265
KVG+ GE R++MRKTV K +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19 KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 266 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 445
AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 446 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 625
GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 626 DPEAFAELKVKELKNGRL 679
DPEAFAELKVKELKNGRL
Sbjct: 199 DPEAFAELKVKELKNGRL 216


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
protein 2 (Predicted protein) OS=Physcomitrella patens
subsp. patens GN=PpLhcb2 PE=4 SV=1
Length = 267

Score = 367 bits (941), Expect = e-100
Identities = 179/209 (85%), Positives = 194/209 (92%), Gaps = 2/209 (0%)
Frame = +2

Query: 59 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 232
GQ++ KP +ELS KVG+ +ARV+MR+TV+KS SDS WYG DR KYLGPFSGE PSYL
Sbjct: 14 GQSLLKPVNELSRKVGS-SQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 233 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 412
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 413 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 592
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 593 GGSFDPLGLADDPEAFAELKVKELKNGRL 679
GGSFDPLGLADDP+ FAELKVKE+KNGRL
Sbjct: 193 GGSFDPLGLADDPDTFAELKVKEIKNGRL 221


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
Length = 267

Score = 367 bits (941), Expect = e-100
Identities = 181/209 (86%), Positives = 193/209 (92%), Gaps = 2/209 (0%)
Frame = +2

Query: 59 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 232
GQ++ KP +ELS KVGNV EARVSMRK+ SKS SDS WYG DR KYLGPFSGE PSYL
Sbjct: 14 GQSLLKPVNELSRKVGNV-EARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 233 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 412
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 413 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 592
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYP 192

Query: 593 GGSFDPLGLADDPEAFAELKVKELKNGRL 679
GGSFDPLGLADDP+ FAELKVKE+KNGRL
Sbjct: 193 GGSFDPLGLADDPDTFAELKVKEIKNGRL 221


>tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_110819 PE=4 SV=1
Length = 267

Score = 366 bits (939), Expect = e-100
Identities = 176/209 (84%), Positives = 196/209 (93%), Gaps = 2/209 (0%)
Frame = +2

Query: 59 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 232
GQ++++P +ELS KVGNV ++RV+MR+TV+KS SDS WYG DR K+LGPFSGE PSYL
Sbjct: 14 GQSLFQPVNELSRKVGNV-DSRVTMRRTVNKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 233 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 412
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 413 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 592
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 593 GGSFDPLGLADDPEAFAELKVKELKNGRL 679
GGSFDPLGLADDP+ FAELKVKE+KNGRL
Sbjct: 193 GGSFDPLGLADDPDTFAELKVKEIKNGRL 221