DK950303 |
Clone id |
TST38A01NGRL0008_E20 |
Library |
TST38 |
Length |
739 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_E20. 5' end sequence. |
Accession |
DK950303 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1216Contig1 |
Sequence |
AGAGTTGCTTTGTCATAGAGAGAAGGGAAATAGAAGAGAGGTAAGGTTGCTTGGCATTCT ATCTTTTGTTCACAGCACCCTATGGAAGTCTCTTTTCGGGAAGGTTGCAGACTCTTTGGA AAAAGGAACTGAAAATGAAGATGAGTACATGATCAGCGAAAAAGAGCTACTTGTTAACAG GTTTATTTCTGTTCCCAAGGATATGGGAGCTTTTAATTGTGGGGCATATGTTGCAGGCAT AGTAAAGGGTGTGCTTGATGGCTCGGGCTTCCCAGCAAGGGTTACAGCACACTTCGTACC TGTAGAAGGTCAACCACGGCCAAGGACAACGATTTTGATCAAGTTTACGGAAGAGGTTTT GCAAAGAGAGGCCCGTCTCAGCTAATAGGAGCTGTGGTTAACCACCCTCCTATTCCTTTT CTTCATTGGCCCCCTCCCCCTTTCCTTTTATTGCCCCTATTTGCCATTGTATTGAAGGGT GTCTGCAATGAAATTAACTCTGGCAGGATAACAGAGCTTAAGGTAAGAGGCCAACTTTTA TGTGCAATATGGATCTTGTTCGTGAAGCAGAGGCACGTGAACAATGATGAAGAAATGTAA AGATTTTGGATAATACAAAGTCTCTCTGATCACGGGAAGACAAATGGACTGACCCTCTTA AACTTGGTGGAGGCAGAAAAGCTTTTTTGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54YG5 |
Definition |
sp|Q54YG5|TPPC5_DICDI Trafficking protein particle complex subunit 5 OS=Dictyostelium discoideum |
Align length |
124 |
Score (bit) |
165.0 |
E-value |
2.0e-40 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NUE7 |
Definition |
tr|A9NUE7|A9NUE7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
125 |
Score (bit) |
235.0 |
E-value |
2.0e-60 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950303|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_E20, 5' (694 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NUE7|A9NUE7_PICSI Putative uncharacterized protein OS=Picea... 235 2e-60 tr|B4FGI9|B4FGI9_MAIZE Putative uncharacterized protein OS=Zea m... 229 1e-58 tr|Q5N9C8|Q5N9C8_ORYSJ cDNA clone:002-182-B01, full insert seque... 228 2e-58 tr|B8A8C6|B8A8C6_ORYSI Putative uncharacterized protein OS=Oryza... 228 2e-58 tr|A9PJ15|A9PJ15_POPJC Putative uncharacterized protein OS=Popul... 226 1e-57 tr|B7FMS6|B7FMS6_MEDTR Putative uncharacterized protein OS=Medic... 225 2e-57 tr|A9PAN6|A9PAN6_POPTR Putative uncharacterized protein OS=Popul... 225 2e-57 tr|A7PFS6|A7PFS6_VITVI Chromosome chr11 scaffold_14, whole genom... 225 2e-57 tr|Q9FGU1|Q9FGU1_ARATH Gb|AAD34459.1 (SPP30-like protein) (At5g5... 224 4e-57 tr|Q9XFA1|Q9XFA1_SOLCH SPP30 OS=Solanum chacoense GN=SPP30 PE=2 ... 224 5e-57 tr|A9TS83|A9TS83_PHYPA Predicted protein OS=Physcomitrella paten... 221 4e-56 tr|A5BKF7|A5BKF7_VITVI Putative uncharacterized protein OS=Vitis... 209 1e-52 tr|A2ZX31|A2ZX31_ORYSJ Putative uncharacterized protein OS=Oryza... 160 6e-38 tr|A9TMK6|A9TMK6_PHYPA Predicted protein OS=Physcomitrella paten... 146 1e-33 tr|B8BSU9|B8BSU9_THAPS Predicted protein OS=Thalassiosira pseudo... 136 1e-30 tr|A7SRF2|A7SRF2_NEMVE Predicted protein OS=Nematostella vectens... 132 2e-29 tr|B6K0U0|B6K0U0_SCHJP TRAPP complex subunit Trs31 OS=Schizosacc... 132 2e-29 tr|A8N279|A8N279_COPC7 Putative uncharacterized protein OS=Copri... 129 2e-28 tr|A8J2W3|A8J2W3_CHLRE Component of TRAPP complex OS=Chlamydomon... 128 3e-28 tr|A3GI95|A3GI95_PICST Transport protein particle (TRAPP) comple... 126 2e-27 tr|A5E6K8|A5E6K8_LODEL Putative uncharacterized protein OS=Lodde... 125 2e-27 tr|Q013E9|Q013E9_OSTTA SPP30-like (ISS) OS=Ostreococcus tauri GN... 125 3e-27 tr|Q5ACM7|Q5ACM7_CANAL Putative uncharacterized protein TRS31 OS... 124 6e-27 tr|B6NQI2|B6NQI2_BRAFL Putative uncharacterized protein OS=Branc... 123 1e-26 tr|A3FPW1|A3FPW1_CRYPV 41-2 protein antigen (Fragment) OS=Crypto... 123 1e-26 tr|B0CQU1|B0CQU1_LACBS TRAPP complex subunit trs31 OS=Laccaria b... 123 1e-26 tr|A7EE44|A7EE44_SCLS1 Putative uncharacterized protein OS=Scler... 122 2e-26 tr|A6S866|A6S866_BOTFB Putative uncharacterized protein OS=Botry... 122 2e-26 tr|A4S1I1|A4S1I1_OSTLU Predicted protein OS=Ostreococcus lucimar... 121 4e-26 tr|B8PC92|B8PC92_9APHY Predicted protein OS=Postia placenta Mad-... 121 4e-26
>tr|A9NUE7|A9NUE7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 228
Score = 235 bits (599), Expect = 2e-60 Identities = 115/125 (92%), Positives = 122/125 (97%) Frame = +2
Query: 2 ELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKELLVNR 181 ELLCHREKGNRRE RLLGILSFVHST+WKSLFGKVADSLEKGTE+EDEYMISE+ELLVNR Sbjct: 102 ELLCHREKGNRRETRLLGILSFVHSTVWKSLFGKVADSLEKGTEHEDEYMISERELLVNR 161
Query: 182 FISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAHFVPVEGQPRPRTTILIKFTEEVL 361 FISVPKDMG FNCGA+VAGIVKGVLDG+GFPA V+AHFVPVEGQPRPRTTILIKF+EEVL Sbjct: 162 FISVPKDMGNFNCGAFVAGIVKGVLDGAGFPAVVSAHFVPVEGQPRPRTTILIKFSEEVL 221
Query: 362 QREAR 376 QREAR Sbjct: 222 QREAR 226
>tr|B4FGI9|B4FGI9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 194
Score = 229 bits (584), Expect = 1e-58 Identities = 112/125 (89%), Positives = 118/125 (94%) Frame = +2
Query: 2 ELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKELLVNR 181 ELLCHREKGNRRE RLLGILSF+HST+WK LFGKVADSLEKGTE+EDEYMISEKELLVNR Sbjct: 68 ELLCHREKGNRRETRLLGILSFIHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNR 127
Query: 182 FISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAHFVPVEGQPRPRTTILIKFTEEVL 361 FISVPKDMGAFNCGA+VAGIVKGVLD +GFPA VTAHFVP+EGQ RPRTTILIKF EEVL Sbjct: 128 FISVPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPIEGQQRPRTTILIKFAEEVL 187
Query: 362 QREAR 376 REAR Sbjct: 188 HREAR 192
>tr|Q5N9C8|Q5N9C8_ORYSJ cDNA clone:002-182-B01, full insert sequence OS=Oryza sativa subsp. japonica GN=P0510F09.29 PE=2 SV=1 Length = 194
Score = 228 bits (582), Expect = 2e-58 Identities = 111/125 (88%), Positives = 119/125 (95%) Frame = +2
Query: 2 ELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKELLVNR 181 ELLCHREKGNRRE RLLGILSF+HST+WK LFGKVADSLEKGTE+EDEYMISEKELLVNR Sbjct: 68 ELLCHREKGNRRETRLLGILSFIHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNR 127
Query: 182 FISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAHFVPVEGQPRPRTTILIKFTEEVL 361 FISVPKDMGAFNCGA+VAGIV+GVL+ +GFPA VTAHFVP+EGQ RPRTTILIKF EEVL Sbjct: 128 FISVPKDMGAFNCGAFVAGIVRGVLENAGFPAVVTAHFVPIEGQQRPRTTILIKFAEEVL 187
Query: 362 QREAR 376 QREAR Sbjct: 188 QREAR 192
>tr|B8A8C6|B8A8C6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03459 PE=4 SV=1 Length = 194
Score = 228 bits (582), Expect = 2e-58 Identities = 111/125 (88%), Positives = 119/125 (95%) Frame = +2
Query: 2 ELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKELLVNR 181 ELLCHREKGNRRE RLLGILSF+HST+WK LFGKVADSLEKGTE+EDEYMISEKELLVNR Sbjct: 68 ELLCHREKGNRRETRLLGILSFIHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNR 127
Query: 182 FISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAHFVPVEGQPRPRTTILIKFTEEVL 361 FISVPKDMGAFNCGA+VAGIV+GVL+ +GFPA VTAHFVP+EGQ RPRTTILIKF EEVL Sbjct: 128 FISVPKDMGAFNCGAFVAGIVRGVLENAGFPAVVTAHFVPIEGQQRPRTTILIKFAEEVL 187
Query: 362 QREAR 376 QREAR Sbjct: 188 QREAR 192
>tr|A9PJ15|A9PJ15_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 194
Score = 226 bits (576), Expect = 1e-57 Identities = 110/125 (88%), Positives = 119/125 (95%) Frame = +2
Query: 2 ELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKELLVNR 181 ELLCHR+KGNRRE RLLGILSFVHST+WK LFGKVADSLEKGTE+EDEYMISEKELLVNR Sbjct: 68 ELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNR 127
Query: 182 FISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAHFVPVEGQPRPRTTILIKFTEEVL 361 FIS+PKDMG FNCGA+VAGIV+GVLDG+GFPA VTAHFVP+EGQ RPRTTILIKF EEVL Sbjct: 128 FISIPKDMGTFNCGAFVAGIVRGVLDGAGFPAVVTAHFVPMEGQHRPRTTILIKFGEEVL 187
Query: 362 QREAR 376 +REAR Sbjct: 188 RREAR 192
>tr|B7FMS6|B7FMS6_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 194
Score = 225 bits (573), Expect = 2e-57 Identities = 109/125 (87%), Positives = 118/125 (94%) Frame = +2
Query: 2 ELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKELLVNR 181 ELLCHR+KGNRRE RLLGILSFVHST+WK LFGKVADSLEKGTE+EDEYMISEKELLVN+ Sbjct: 68 ELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNK 127
Query: 182 FISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAHFVPVEGQPRPRTTILIKFTEEVL 361 FIS+PKDMG FNCGA+VAGIV+GVLDG+GFPA VTAHFVP+EGQ RPRTTILIKF EEVL Sbjct: 128 FISIPKDMGTFNCGAFVAGIVRGVLDGAGFPAVVTAHFVPMEGQQRPRTTILIKFAEEVL 187
Query: 362 QREAR 376 REAR Sbjct: 188 LREAR 192
>tr|A9PAN6|A9PAN6_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 194
Score = 225 bits (573), Expect = 2e-57 Identities = 109/125 (87%), Positives = 118/125 (94%) Frame = +2
Query: 2 ELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKELLVNR 181 ELLCHR+KGNRRE RLLGILSFVHST+WK LFGKVADSLEKGTE+EDEYMISEKELLVNR Sbjct: 68 ELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNR 127
Query: 182 FISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAHFVPVEGQPRPRTTILIKFTEEVL 361 FIS+PKDMG FNCGA+VAGIV+GVLD +GFPA VTAHFVP+EGQ RPRTTILIKF EEVL Sbjct: 128 FISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQRPRTTILIKFAEEVL 187
Query: 362 QREAR 376 +REAR Sbjct: 188 RREAR 192
>tr|A7PFS6|A7PFS6_VITVI Chromosome chr11 scaffold_14, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017228001 PE=4 SV=1 Length = 194
Score = 225 bits (573), Expect = 2e-57 Identities = 109/125 (87%), Positives = 118/125 (94%) Frame = +2
Query: 2 ELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKELLVNR 181 ELLCHR+KGNRRE RLLGILSFVHST+WK LFGKVADSLEKGTE+EDEYMISEKELLVNR Sbjct: 68 ELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNR 127
Query: 182 FISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAHFVPVEGQPRPRTTILIKFTEEVL 361 FIS+PKDMG FNCGA+VAGIV+GVLD +GFPA VTAHFVP+EGQ RPRTTILIKF EEVL Sbjct: 128 FISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQRPRTTILIKFAEEVL 187
Query: 362 QREAR 376 +REAR Sbjct: 188 RREAR 192
>tr|Q9FGU1|Q9FGU1_ARATH Gb|AAD34459.1 (SPP30-like protein) (At5g58030) OS=Arabidopsis thaliana GN=At5g58030 PE=2 SV=1 Length = 195
Score = 224 bits (571), Expect = 4e-57 Identities = 109/125 (87%), Positives = 118/125 (94%) Frame = +2
Query: 2 ELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKELLVNR 181 ELLC+REKGNRRE RLLGILSFVHST+WK LFGKVADSLEKGTE+EDEYMISEKELLVNR Sbjct: 68 ELLCNREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNR 127
Query: 182 FISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAHFVPVEGQPRPRTTILIKFTEEVL 361 FIS+PKDMG FNCGA+VAGIVKGVLD +GFPA VTAHFVP+EGQ RPRTTILIKF +EVL Sbjct: 128 FISIPKDMGTFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPIEGQQRPRTTILIKFADEVL 187
Query: 362 QREAR 376 +REAR Sbjct: 188 KREAR 192
>tr|Q9XFA1|Q9XFA1_SOLCH SPP30 OS=Solanum chacoense GN=SPP30 PE=2 SV=1 Length = 194
Score = 224 bits (570), Expect = 5e-57 Identities = 109/124 (87%), Positives = 118/124 (95%) Frame = +2
Query: 2 ELLCHREKGNRREVRLLGILSFVHSTLWKSLFGKVADSLEKGTENEDEYMISEKELLVNR 181 ELLCHREKGNRRE RLLGILSFVHST+WK LFGKVADSLEKGTE+EDEYMISEKELLVNR Sbjct: 68 ELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNR 127
Query: 182 FISVPKDMGAFNCGAYVAGIVKGVLDGSGFPARVTAHFVPVEGQPRPRTTILIKFTEEVL 361 FIS+PKDMGAFNCG++VAGIV+GVL+ +GFPA VTAHFVPVEGQ RPRTTILIKF EEVL Sbjct: 128 FISIPKDMGAFNCGSFVAGIVRGVLENAGFPAVVTAHFVPVEGQHRPRTTILIKFAEEVL 187
Query: 362 QREA 373 +REA Sbjct: 188 RREA 191
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