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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950313
Clone id TST38A01NGRL0008_F06
Library
Length 300
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_F06. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
CTTAAATTGGAGTTGTGTTAGTAGATTAGTGAATGTGGTGATGCACATTGATCTATAGTT
TATACATTTCATTAATTGAATTATGGACATGTCTTTAGTAGAAGCTCTTCACGAGCAATG
AGCAGTGATTATTTTATGCCTAAGTGTGAACAATTGTATTCTTTTTTTTGAGCATTGCCT
CTTATCTATTAATAAATATGTGCAAGGAAAAAAGTTCACTCTTTCACCAAGGGAGATTAC
ACCCATTTCCTTTGTCATTTCATCTCTCTCTCTCTCAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q59025
Definition sp|Q59025|Y1631_METJA Uncharacterized protein MJ1631 OS=Methanocaldococcus jannaschii
Align length 33
Score (bit) 29.3
E-value 6.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950313|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_F06, 5'
         (276 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q59025|Y1631_METJA Uncharacterized protein MJ1631 OS=Methanoc...    29   6.4  
sp|P44339|Y1171_HAEIN Putative anthranilate synthase component I...    29   6.4  

>sp|Q59025|Y1631_METJA Uncharacterized protein MJ1631
           OS=Methanocaldococcus jannaschii GN=MJ1631 PE=3 SV=1
          Length = 519

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +3

Query: 168 LSIASYLLINMCKEKSSLFHQGRLHPFPLSFHL 266
           L I  Y +I  C E   LFH    HP PL F L
Sbjct: 145 LGIGGYKVIKEC-ENVKLFHMNEPHPLPLVFKL 176


>sp|P44339|Y1171_HAEIN Putative anthranilate synthase component II
           OS=Haemophilus influenzae GN=HI1171 PE=4 SV=1
          Length = 193

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +2

Query: 92  SLVEALHEQ*AVIILCLSVNNCILFFEHCLLSINKYVQGKKFTLSPREITPISF 253
           S++E  ++Q +++ +CL       FF   L ++     G+K TL  R  +P+ F
Sbjct: 63  SMLEKYYQQKSILGVCLGHQTLCEFFGGTLYNLENVRHGQKRTLKVRSNSPLFF 116
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950313|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_F06, 5'
         (276 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******