DK950319
Clone id TST38A01NGRL0008_F12
Library
Length 612
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_F12. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
TACGCATATATAGTCTCATCTTACTACTTTTTCTGCACACAATCATTAGACGCTCCATCC
ATACCACTTCCACACACTCTTCATCTCTCTGTCTCTCTCTCACTCTCTGTGTGCAGCATG
CGAGAACGGCTCGTGTCTTCGAATGAAGGCAAGTGCATGGAATGACTGCTAGTGTCACGC
CTTGGACGATGTTGCTTTTTGCGCTCCAGGCTTCCCTTTAGATCAAAACTGTGGTGGCAA
CTTGTCTTCCCCGCATTGAAATGGGGGGCCTCTGCTTTCAAACCTTGAGTGCGACTCGTC
TTCTCACATTCTTCACCTTCGTGCTATGGTGCATTGTGGCTTGTAGGCTCCAAGTGAATC
AGGCGAGGTCCCTAGTAGACGGGCCTTCAAAGATCTCTCTTTTCCAGAGCAACGACAGTA
CTGCAGCTACCAACATGAACGTGCTTGAAGCTGCGGATGAAGTGAGGAGAAGATTGGGGT
ATTATGGAGGAGGAGGAGTAGGAGGAGGGGGGGGTTCGTTCNATATAATANATAGGTGCT
GGAGAGGGGATTCAGATTGGGCAGAAGACAGGATGACGCTGGCAGGGTGCGGCATCCGGT
TTGGAAGCAATG
■■Homology search results ■■ -
sp_hit_id P18632
Definition sp|P18632|SBP_CRYJA Sugi basic protein OS=Cryptomeria japonica
Align length 28
Score (bit) 45.1
E-value 0.0003
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950319|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_F12, 5'
(612 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P18632|SBP_CRYJA Sugi basic protein OS=Cryptomeria japonica P... 45 3e-04
sp|Q9LLT1|MPAJ1_JUNVI Major pollen allergen Jun v 1 OS=Juniperus... 44 9e-04
sp|P81294|MPAJ1_JUNAS Major pollen allergen Jun a 1 OS=Juniperus... 43 0.001
sp|Q9SCG9|MPAC1_CUPAR Major pollen allergen Cup a 1 OS=Cupressus... 42 0.003
sp|Q96385|MPAC1_CHAOB Major pollen allergen Cha o 1 OS=Chamaecyp... 42 0.003
sp|P40972|PEL_TOBAC Pectate lyase OS=Nicotiana tabacum PE=2 SV=1 41 0.006
sp|P27759|MPA11_AMBAR Pollen allergen Amb a 1.1 OS=Ambrosia arte... 40 0.007
sp|Q93Z25|PEL22_ARATH Probable pectate lyase 22 OS=Arabidopsis t... 40 0.009
sp|P28744|MPA14_AMBAR Pollen allergen Amb a 1.4 OS=Ambrosia arte... 39 0.016
sp|P15721|PEL56_SOLLC Probable pectate lyase P56 OS=Solanum lyco... 39 0.021
sp|O24554|PEL_ZINEL Pectate lyase OS=Zinnia elegans PE=1 SV=1 37 0.061
sp|P15722|PEL59_SOLLC Probable pectate lyase P59 OS=Solanum lyco... 37 0.061
sp|O64510|PEL6_ARATH Probable pectate lyase 6 OS=Arabidopsis tha... 37 0.080
sp|Q940Q1|PEL1_ARATH Probable pectate lyase 1 OS=Arabidopsis tha... 37 0.080
sp|Q944R1|PEL15_ARATH Probable pectate lyase 15 OS=Arabidopsis t... 37 0.080
sp|Q9LRM5|PEL9_ARATH Probable pectate lyase 9 OS=Arabidopsis tha... 36 0.18
sp|P27762|MPAA2_AMBAR Pollen allergen Amb a 2 OS=Ambrosia artemi... 36 0.18
sp|O65456|PEL16_ARATH Probable pectate lyase 16 OS=Arabidopsis t... 35 0.23
sp|Q9LTZ0|PEL11_ARATH Putative pectate lyase 11 OS=Arabidopsis t... 35 0.30
sp|P27761|MPA13_AMBAR Pollen allergen Amb a 1.3 OS=Ambrosia arte... 35 0.30
sp|Q9FM66|PEL21_ARATH Putative pectate lyase 21 OS=Arabidopsis t... 35 0.40
sp|Q9C5M8|PEL18_ARATH Probable pectate lyase 18 OS=Arabidopsis t... 35 0.40
sp|P27760|MPA12_AMBAR Pollen allergen Amb a 1.2 OS=Ambrosia arte... 34 0.52
sp|Q9SCP2|PEL12_ARATH Probable pectate lyase 12 OS=Arabidopsis t... 34 0.67
sp|Q9M9S2|PEL3_ARATH Probable pectate lyase 3 OS=Arabidopsis tha... 33 0.88
sp|O65457|PEL17_ARATH Putative pectate lyase 17 OS=Arabidopsis t... 33 0.88
sp|Q9FXD8|PEL5_ARATH Probable pectate lyase 5 OS=Arabidopsis tha... 33 1.2
sp|Q9M8Z8|PEL8_ARATH Probable pectate lyase 8 OS=Arabidopsis tha... 33 1.5
sp|Q9SVQ6|PEL14_ARATH Putative pectate lyase 14 OS=Arabidopsis t... 33 1.5
sp|Q93Z04|PEL13_ARATH Probable pectate lyase 13 OS=Arabidopsis t... 33 1.5

>sp|P18632|SBP_CRYJA Sugi basic protein OS=Cryptomeria japonica PE=1
SV=2
Length = 374

Score = 45.1 bits (105), Expect = 3e-04
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWRGDS+WA++RM LA C + FGS+
Sbjct: 25 IDSCWRGDSNWAQNRMKLADCAVGFGSS 52


>sp|Q9LLT1|MPAJ1_JUNVI Major pollen allergen Jun v 1 OS=Juniperus
virginiana PE=1 SV=1
Length = 367

Score = 43.5 bits (101), Expect = 9e-04
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWRGDS+W ++RM LA C + FGS+
Sbjct: 25 IDSCWRGDSNWGQNRMKLADCAVGFGSS 52


>sp|P81294|MPAJ1_JUNAS Major pollen allergen Jun a 1 OS=Juniperus
ashei PE=1 SV=1
Length = 367

Score = 42.7 bits (99), Expect = 0.001
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWRGDS+W ++RM LA C + FGS+
Sbjct: 25 IDSCWRGDSNWDQNRMKLADCAVGFGSS 52


>sp|Q9SCG9|MPAC1_CUPAR Major pollen allergen Cup a 1 OS=Cupressus
arizonica PE=1 SV=1
Length = 346

Score = 41.6 bits (96), Expect = 0.003
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWRGDS+W ++RM LA C + FGS+
Sbjct: 4 IDSCWRGDSNWDQNRMKLADCVVGFGSS 31


>sp|Q96385|MPAC1_CHAOB Major pollen allergen Cha o 1
OS=Chamaecyparis obtusa PE=1 SV=1
Length = 375

Score = 41.6 bits (96), Expect = 0.003
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWRGD++W ++RM LA C + FGS+
Sbjct: 25 IDSCWRGDANWDQNRMKLADCAVGFGSS 52


>sp|P40972|PEL_TOBAC Pectate lyase OS=Nicotiana tabacum PE=2 SV=1
Length = 397

Score = 40.8 bits (94), Expect = 0.006
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I +CWR D +WAE+R +A C + FGSN
Sbjct: 48 IDKCWRCDPNWAENRQKMADCALGFGSN 75


>sp|P27759|MPA11_AMBAR Pollen allergen Amb a 1.1 OS=Ambrosia
artemisiifolia PE=1 SV=1
Length = 396

Score = 40.4 bits (93), Expect = 0.007
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3

Query: 516 SFXIIXRCWRGDSDWAEDRMTLAGCGIRFG 605
++ II CWRG +DWAE+R LA C FG
Sbjct: 46 AYNIIDGCWRGKADWAENRKALADCAQGFG 75


>sp|Q93Z25|PEL22_ARATH Probable pectate lyase 22 OS=Arabidopsis
thaliana GN=At5g63180 PE=2 SV=1
Length = 432

Score = 40.0 bits (92), Expect = 0.009
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWR D DW ++R LA CGI FG N
Sbjct: 84 IDDCWRCDKDWEKNRKRLADCGIGFGKN 111


>sp|P28744|MPA14_AMBAR Pollen allergen Amb a 1.4 OS=Ambrosia
artemisiifolia PE=1 SV=1
Length = 392

Score = 39.3 bits (90), Expect = 0.016
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3

Query: 429 TNMNVLEAADEVRRRLXXXXXXXXXXXXXSFXIIXRCWRGDSDWAEDRMTLAGCGIRF 602
T + + +A+++++ L ++ II CWRG +DWAE+R LA C F
Sbjct: 18 TLLQPVRSAEDLQQILPSANETRSLTTCGTYNIIDGCWRGKADWAENRKALADCAQGF 75


>sp|P15721|PEL56_SOLLC Probable pectate lyase P56 OS=Solanum
lycopersicum GN=LAT56 PE=2 SV=2
Length = 398

Score = 38.9 bits (89), Expect = 0.021
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I +CWR D WAEDR +A C + FG N
Sbjct: 49 IDKCWRCDPFWAEDRQKMADCALGFGIN 76


tr_hit_id Q8RUR1
Definition tr|Q8RUR1|Q8RUR1_CRYJA Cry j 1 OS=Cryptomeria japonica
Align length 28
Score (bit) 45.1
E-value 0.003
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950319|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_F12, 5'
(612 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8RUR1|Q8RUR1_CRYJA Cry j 1 OS=Cryptomeria japonica GN=Cry j ... 45 0.003
tr|Q9M4S6|Q9M4S6_9CONI Cup s 1 pollen allergen OS=Cupressus semp... 43 0.016
tr|Q9M4S5|Q9M4S5_9CONI Cup s 1 pollen allergen OS=Cupressus semp... 43 0.016
tr|Q9M4S4|Q9M4S4_9CONI Cup s 1 pollen allergen OS=Cupressus semp... 43 0.016
tr|Q9M4S3|Q9M4S3_9CONI Cup s 1 pollen allergen OS=Cupressus semp... 43 0.016
tr|Q9M4S2|Q9M4S2_9CONI Cup s 1 pollen allergen OS=Cupressus semp... 43 0.016
tr|Q93X51|Q93X51_JUNOX Putative allergen jun o 1 OS=Juniperus ox... 42 0.021
tr|A0T2M2|A0T2M2_CUPAR Major allergen Cup a 1 (Fragment) OS=Cupr... 42 0.037
tr|Q93XL6|Q93XL6_CUPAR Putative allergen Cup a 1 OS=Cupressus ar... 41 0.048
tr|B6SSS1|B6SSS1_MAIZE Pectate lyase 8 OS=Zea mays PE=2 SV=1 41 0.062
tr|B4FX29|B4FX29_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.082
tr|Q9SDW4|Q9SDW4_MUSAC Pectate lyase 1 OS=Musa acuminata GN=PL1 ... 40 0.11
tr|Q8H7G4|Q8H7G4_ARATH Putative uncharacterized protein (Fragmen... 40 0.11
tr|Q43783|Q43783_MUSAC Pectate lyase (Fragment) OS=Musa acuminat... 40 0.11
tr|A9TCM9|A9TCM9_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.11
tr|Q7XRM8|Q7XRM8_ORYSJ OSJNBa0095E20.8 protein OS=Oryza sativa s... 39 0.18
tr|Q0JF70|Q0JF70_ORYSJ Os04g0137100 protein OS=Oryza sativa subs... 39 0.18
tr|Q01N16|Q01N16_ORYSA OSIGBa0147B06.7 protein OS=Oryza sativa G... 39 0.18
tr|B8AV17|B8AV17_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.18
tr|A3AQJ7|A3AQJ7_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.18
tr|A1IIA8|A1IIA8_PRUPE Pectate lyase (Fragment) OS=Prunus persic... 39 0.18
tr|B8LQV2|B8LQV2_PICSI Putative uncharacterized protein OS=Picea... 39 0.24
tr|B8LQ61|B8LQ61_PICSI Putative uncharacterized protein OS=Picea... 39 0.24
tr|O24159|O24159_TOBAC Putative pectate lyase Nt59 (Fragment) OS... 39 0.31
tr|A9NWK6|A9NWK6_PICSI Putative uncharacterized protein OS=Picea... 39 0.31
tr|A7QI53|A7QI53_VITVI Chromosome chr17 scaffold_101, whole geno... 39 0.31
tr|Q8S345|Q8S345_CAPAN Putative pectate-lyase (Fragment) OS=Caps... 38 0.40
tr|Q6YZ34|Q6YZ34_ORYSJ Putative Cup s 1 pollen allergen (Putativ... 38 0.40
tr|A2YTH5|A2YTH5_ORYSI Putative uncharacterized protein OS=Oryza... 38 0.40
tr|Q9SDW3|Q9SDW3_MUSAC Pectate lyase 2 OS=Musa acuminata GN=PL2 ... 38 0.53

>tr|Q8RUR1|Q8RUR1_CRYJA Cry j 1 OS=Cryptomeria japonica GN=Cry j 1.1
PE=2 SV=1
Length = 374

Score = 45.1 bits (105), Expect = 0.003
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWRGDS+WA++RM LA C + FGS+
Sbjct: 25 IDSCWRGDSNWAQNRMKLADCAVGFGSS 52


>tr|Q9M4S6|Q9M4S6_9CONI Cup s 1 pollen allergen OS=Cupressus
sempervirens GN=CUPS1 PE=2 SV=1
Length = 367

Score = 42.7 bits (99), Expect = 0.016
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWRGDS+W ++RM LA C + FGS+
Sbjct: 25 IDSCWRGDSNWDQNRMKLADCAVGFGSS 52


>tr|Q9M4S5|Q9M4S5_9CONI Cup s 1 pollen allergen OS=Cupressus
sempervirens GN=CUPS1 PE=2 SV=1
Length = 367

Score = 42.7 bits (99), Expect = 0.016
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWRGDS+W ++RM LA C + FGS+
Sbjct: 25 IDSCWRGDSNWDQNRMKLADCAVGFGSS 52


>tr|Q9M4S4|Q9M4S4_9CONI Cup s 1 pollen allergen OS=Cupressus
sempervirens GN=CUPS1 PE=2 SV=1
Length = 367

Score = 42.7 bits (99), Expect = 0.016
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWRGDS+W ++RM LA C + FGS+
Sbjct: 25 IDSCWRGDSNWDQNRMKLADCAVGFGSS 52


>tr|Q9M4S3|Q9M4S3_9CONI Cup s 1 pollen allergen OS=Cupressus
sempervirens GN=CUPS1 PE=2 SV=1
Length = 367

Score = 42.7 bits (99), Expect = 0.016
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWRGDS+W ++RM LA C + FGS+
Sbjct: 25 IDSCWRGDSNWDQNRMKLADCAVGFGSS 52


>tr|Q9M4S2|Q9M4S2_9CONI Cup s 1 pollen allergen OS=Cupressus
sempervirens GN=CUPS1 PE=2 SV=1
Length = 367

Score = 42.7 bits (99), Expect = 0.016
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWRGDS+W ++RM LA C + FGS+
Sbjct: 25 IDSCWRGDSNWDQNRMKLADCAVGFGSS 52


>tr|Q93X51|Q93X51_JUNOX Putative allergen jun o 1 OS=Juniperus
oxycedrus GN=jun o 1 PE=2 SV=1
Length = 367

Score = 42.4 bits (98), Expect = 0.021
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWRGDS+W ++RM LA C + FGS+
Sbjct: 25 IDSCWRGDSNWGQNRMKLADCVVGFGSS 52


>tr|A0T2M2|A0T2M2_CUPAR Major allergen Cup a 1 (Fragment)
OS=Cupressus arizonica PE=2 SV=1
Length = 347

Score = 41.6 bits (96), Expect = 0.037
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWRGDS+W ++RM LA C + FGS+
Sbjct: 5 IDSCWRGDSNWDQNRMKLADCVVGFGSS 32


>tr|Q93XL6|Q93XL6_CUPAR Putative allergen Cup a 1 OS=Cupressus
arizonica GN=cup a 1 PE=2 SV=2
Length = 367

Score = 41.2 bits (95), Expect = 0.048
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGS 608
I CWRGDS+W ++RM LA C + FGS
Sbjct: 25 IDSCWRGDSNWDQNRMKLADCVVGFGS 51


>tr|B6SSS1|B6SSS1_MAIZE Pectate lyase 8 OS=Zea mays PE=2 SV=1
Length = 467

Score = 40.8 bits (94), Expect = 0.062
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +3

Query: 528 IXRCWRGDSDWAEDRMTLAGCGIRFGSN 611
I CWR DSDW +R LA CGI FG N
Sbjct: 134 IDDCWRCDSDWHSNRQRLADCGIGFGRN 161