DK950321 |
Clone id |
TST38A01NGRL0008_F14 |
Library |
TST38 |
Length |
688 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_F14. 5' end sequence. |
Accession |
DK950321 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3197Contig1 |
Sequence |
TTCTCGAATGTGTCAATAGCGGTCGAGCTCAGATACGAGTGAATGATCCAATGGCTAATG GAGACACGACTTTTAGTGAGCGAGGTGGAAATTCAGATGGAATGAGTATCTAGGCAGCAG CAATTCCTCATGTGGCAGGAAGCAGACTCGACGCCATCGCCAGAGGCGGGCAGGGAGGGC CTTAGAGAAAACAAAATACACGAAGAAGGAAAACGCAGTGGAAGAGCTAGAAGCAGTGGC GACCTTATAATCCGACGGCGAGATAGCGTGGACGGCGGACGGTCTGTTGCTGCTCGCTTT GCTTCCCGTATGGCATCTCCTTCGAACATCTGGGTGCTTCTCGGTCTTGGCATTGCTGGT ATCCTCCTCCTCACTCGCTCTCGGAAAAAGCAAATCAGCAAAGATTTTGGCGCTTTCATA AAGTACCTGGAACTCCTCCCCCCTCCTCAGCCTGCTCCCCCCATTGCTCCCCATCCTCTC AGCAATCTCACGTTCGCTGTCAAAGACATTTTTGATGTGGAAGGTTTCATTACTGGCTTT GGCAATCCTGACTGGGAGAGGACTCATGAACCTGCTCTACGTACTGCCCCAGCTGTTGCA TGTCTTGTGCAAGCAGGAGCGACTTGTGTAGGCAAAACCCACATGGATGAAATGGCCTAT TCATTGATAGGGGAAAATAAACACTATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5P4D0 |
Definition |
sp|Q5P4D0|GATA_AZOSE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Azoarcus sp. (strain EbN1) |
Align length |
69 |
Score (bit) |
40.8 |
E-value |
0.007 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PH66 |
Definition |
tr|A7PH66|A7PH66_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
125 |
Score (bit) |
130.0 |
E-value |
8.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950321|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_F14, 5' (688 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PH66|A7PH66_VITVI Chromosome chr17 scaffold_16, whole genom... 130 8e-29 tr|A5AGK8|A5AGK8_VITVI Putative uncharacterized protein OS=Vitis... 130 8e-29 tr|Q6RJN6|Q6RJN6_PHYPA Chloroplast Toc64-2 OS=Physcomitrella pat... 125 3e-27 tr|Q6RJN7|Q6RJN7_PHYPA Chloroplast Toc64-1 OS=Physcomitrella pat... 125 3e-27 tr|A9TS00|A9TS00_PHYPA Predicted protein OS=Physcomitrella paten... 124 6e-27 tr|Q9LVH5|Q9LVH5_ARATH Gb|AAB70409.1 OS=Arabidopsis thaliana GN=... 118 3e-25 tr|Q9MUK5|Q9MUK5_PEA Toc64 OS=Pisum sativum GN=toc64 PE=1 SV=1 112 2e-23 tr|A7PSC3|A7PSC3_VITVI Chromosome chr14 scaffold_27, whole genom... 112 2e-23 tr|A5BL97|A5BL97_VITVI Putative uncharacterized protein OS=Vitis... 112 2e-23 tr|B6ZLB9|B6ZLB9_TOBAC Indole-3-acetamide hydrolase (Fragment) O... 103 1e-20 tr|B6ZLB8|B6ZLB8_TOBAC Indole-3-acetamide hydrolase OS=Nicotiana... 103 1e-20 tr|Q9FY73|Q9FY73_ARATH Putative subunit of TOC complex OS=Arabid... 102 2e-20 tr|Q9FR37|Q9FR37_ARATH Amidase (At1g08980/F7G19_15) OS=Arabidops... 102 2e-20 tr|O04032|O04032_ARATH F7G19.15 protein OS=Arabidopsis thaliana ... 102 2e-20 tr|A8JA32|A8JA32_CHLRE Amidase OS=Chlamydomonas reinhardtii GN=A... 100 7e-20 tr|Q7XT06|Q7XT06_ORYSJ Os04g0117800 protein OS=Oryza sativa subs... 99 2e-19 tr|Q01ML1|Q01ML1_ORYSA H0613H07.2 protein OS=Oryza sativa GN=H06... 99 2e-19 tr|A3AQC6|A3AQC6_ORYSJ cDNA, clone: J100072C12, full insert sequ... 99 2e-19 tr|A2XPT4|A2XPT4_ORYSI Putative uncharacterized protein OS=Oryza... 99 2e-19 tr|Q7XTK3|Q7XTK3_ORYSJ Os04g0118100 protein OS=Oryza sativa subs... 98 6e-19 tr|Q01ML0|Q01ML0_ORYSA H0613H07.3 protein OS=Oryza sativa GN=H06... 98 6e-19 tr|A2XPT5|A2XPT5_ORYSI Putative uncharacterized protein OS=Oryza... 98 6e-19 tr|B6SPG6|B6SPG6_MAIZE Amidase OS=Zea mays PE=2 SV=1 91 9e-17 tr|A7QIF4|A7QIF4_VITVI Chromosome chr12 scaffold_103, whole geno... 90 1e-16 tr|Q2W6Q3|Q2W6Q3_MAGMM Asp-tRNAAsn/Glu-tRNAGln amidotransferase ... 89 3e-16 tr|Q94GR7|Q94GR7_ORYSA Chloroplast protein-translocon-like prote... 87 1e-15 tr|Q10E52|Q10E52_ORYSJ Os03g0707900 protein OS=Oryza sativa subs... 87 1e-15 tr|B8AQB7|B8AQB7_ORYSI Putative uncharacterized protein OS=Oryza... 87 1e-15 tr|A3ALX4|A3ALX4_ORYSJ Putative uncharacterized protein OS=Oryza... 85 4e-15 tr|Q6Z697|Q6Z697_ORYSJ Os02g0754500 protein OS=Oryza sativa subs... 84 6e-15
>tr|A7PH66|A7PH66_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017826001 PE=4 SV=1 Length = 590
Score = 130 bits (327), Expect = 8e-29 Identities = 61/125 (48%), Positives = 79/125 (63%) Frame = +1
Query: 313 ASPSNIWVXXXXXXXXXXXXTRSRKKQISKDFGAFIKYXXXXXXXXXXXXXXXXXXSNLT 492 +S +N+WV TR KK I +DFGAF++ +NL+ Sbjct: 3 SSSANLWVLLGLGLAGVLLMTRKLKKTIREDFGAFVQRLQLLPPPQPAPPKAPHPLTNLS 62
Query: 493 FAVKDIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIG 672 FAV D+FD+EG++TGFGNPDW RTH+ A RT+P V+ LV+ GATC GKT +DEMAYS+ G Sbjct: 63 FAVSDVFDIEGYVTGFGNPDWARTHDTASRTSPVVSALVEGGATCTGKTVVDEMAYSING 122
Query: 673 ENKHY 687 ENKHY Sbjct: 123 ENKHY 127
>tr|A5AGK8|A5AGK8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008861 PE=4 SV=1 Length = 503
Score = 130 bits (327), Expect = 8e-29 Identities = 61/125 (48%), Positives = 79/125 (63%) Frame = +1
Query: 313 ASPSNIWVXXXXXXXXXXXXTRSRKKQISKDFGAFIKYXXXXXXXXXXXXXXXXXXSNLT 492 +S +N+WV TR KK I +DFGAF++ +NL+ Sbjct: 3 SSSANLWVLLGLGLAGVLLMTRKLKKTIREDFGAFVQRLQLLPPPQPAPPKAPHPLTNLS 62
Query: 493 FAVKDIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIG 672 FAV D+FD+EG++TGFGNPDW RTH+ A RT+P V+ LV+ GATC GKT +DEMAYS+ G Sbjct: 63 FAVSDVFDIEGYVTGFGNPDWARTHDTASRTSPVVSALVEGGATCTGKTVVDEMAYSING 122
Query: 673 ENKHY 687 ENKHY Sbjct: 123 ENKHY 127
>tr|Q6RJN6|Q6RJN6_PHYPA Chloroplast Toc64-2 OS=Physcomitrella patens PE=2 SV=1 Length = 585
Score = 125 bits (314), Expect = 3e-27 Identities = 64/104 (61%), Positives = 68/104 (65%) Frame = +1
Query: 376 RSRKKQISKDFGAFIKYXXXXXXXXXXXXXXXXXXSNLTFAVKDIFDVEGFITGFGNPDW 555 R+ K KD GAFI Y S LTFAVKDIFDVEGFITGFGNP W Sbjct: 27 RTLKSSSKKDNGAFIYYFELLPPPPPPPPSAPLPLSGLTFAVKDIFDVEGFITGFGNPVW 86
Query: 556 ERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIGENKHY 687 THEPA TAPAV LV+AGA CVGK HMDE+AYS+ GENKHY Sbjct: 87 AETHEPATVTAPAVKVLVEAGAKCVGKLHMDELAYSINGENKHY 130
>tr|Q6RJN7|Q6RJN7_PHYPA Chloroplast Toc64-1 OS=Physcomitrella patens PE=2 SV=1 Length = 592
Score = 125 bits (313), Expect = 3e-27 Identities = 59/96 (61%), Positives = 68/96 (70%) Frame = +1
Query: 400 KDFGAFIKYXXXXXXXXXXXXXXXXXXSNLTFAVKDIFDVEGFITGFGNPDWERTHEPAL 579 KD GAFI+Y S LTFA+KDIFD+EGF+TGFGNPDW THEPA Sbjct: 36 KDNGAFIEYFELLPPPPPPPPSAPHPLSGLTFAIKDIFDIEGFVTGFGNPDWASTHEPAT 95
Query: 580 RTAPAVACLVQAGATCVGKTHMDEMAYSLIGENKHY 687 RTA AV LV+AGATC+GK MDE+AYS+IG+NKHY Sbjct: 96 RTAAAVKVLVEAGATCIGKLIMDELAYSIIGDNKHY 131
>tr|A9TS00|A9TS00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_197643 PE=4 SV=1 Length = 603
Score = 124 bits (311), Expect = 6e-27 Identities = 62/104 (59%), Positives = 72/104 (69%) Frame = +1
Query: 376 RSRKKQISKDFGAFIKYXXXXXXXXXXXXXXXXXXSNLTFAVKDIFDVEGFITGFGNPDW 555 R+ + + +D GAFI+Y S LTFAVKDIFDVEGF+TGFGNPDW Sbjct: 28 RALRLAVKRDNGAFIEYFELPPATSPSSAPQPL--SGLTFAVKDIFDVEGFVTGFGNPDW 85
Query: 556 ERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIGENKHY 687 THEPA RTA AV LV +GATCVGK HMDE+AYS+IG+NKHY Sbjct: 86 AATHEPATRTALAVKYLVDSGATCVGKLHMDELAYSIIGDNKHY 129
>tr|Q9LVH5|Q9LVH5_ARATH Gb|AAB70409.1 OS=Arabidopsis thaliana GN=At3g17970 PE=4 SV=1 Length = 589
Score = 118 bits (296), Expect = 3e-25 Identities = 56/122 (45%), Positives = 73/122 (59%) Frame = +1
Query: 322 SNIWVXXXXXXXXXXXXTRSRKKQISKDFGAFIKYXXXXXXXXXXXXXXXXXXSNLTFAV 501 +N+WV T+ KK + +DFGAFI + LTFAV Sbjct: 6 ANLWVLLGLGLAGILMLTKKLKKTVREDFGAFIDKLMLLPPPQPAPPKAPHPLTGLTFAV 65
Query: 502 KDIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSLIGENK 681 D+FD+ G++TGFG+PDW RTHE A T+P V+ LV+ GATCVGKT +DE A+S+ GENK Sbjct: 66 SDVFDITGYVTGFGHPDWVRTHEAASSTSPVVSTLVEGGATCVGKTVVDEFAFSISGENK 125
Query: 682 HY 687 HY Sbjct: 126 HY 127
>tr|Q9MUK5|Q9MUK5_PEA Toc64 OS=Pisum sativum GN=toc64 PE=1 SV=1 Length = 593
Score = 112 bits (281), Expect = 2e-23 Identities = 56/127 (44%), Positives = 76/127 (59%), Gaps = 1/127 (0%) Frame = +1
Query: 310 MASPSN-IWVXXXXXXXXXXXXTRSRKKQISKDFGAFIKYXXXXXXXXXXXXXXXXXXSN 486 MASPS+ IWV TR + + +DFGAF+ S+ Sbjct: 4 MASPSSQIWVILGLGLAGIYVLTRKLTQAVKEDFGAFLLKLKLLPPPPPAPPKAPHPLSS 63
Query: 487 LTFAVKDIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAYSL 666 L FA+ DIFD+EG ++ FG+P+W RTHEPA TA AV+ LV++GATC+G T +DE+AY + Sbjct: 64 LNFAISDIFDIEGHVSTFGHPEWARTHEPASSTASAVSALVESGATCIGTTVVDELAYGI 123
Query: 667 IGENKHY 687 GENKH+ Sbjct: 124 SGENKHF 130
>tr|A7PSC3|A7PSC3_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022849001 PE=4 SV=1 Length = 433
Score = 112 bits (280), Expect = 2e-23 Identities = 49/69 (71%), Positives = 60/69 (86%) Frame = +1
Query: 481 SNLTFAVKDIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAY 660 + LTFAVKDIFDV+G++TGFGNPDW RTH+ A+ TAP+V +++ GATCVGKT MDEMAY Sbjct: 28 NGLTFAVKDIFDVDGYVTGFGNPDWARTHQAAMLTAPSVLAVLKGGATCVGKTVMDEMAY 87
Query: 661 SLIGENKHY 687 S+ GENKHY Sbjct: 88 SINGENKHY 96
>tr|A5BL97|A5BL97_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015334 PE=4 SV=1 Length = 433
Score = 112 bits (280), Expect = 2e-23 Identities = 49/69 (71%), Positives = 60/69 (86%) Frame = +1
Query: 481 SNLTFAVKDIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAY 660 + LTFAVKDIFDV+G++TGFGNPDW RTH+ A+ TAP+V +++ GATCVGKT MDEMAY Sbjct: 28 NGLTFAVKDIFDVDGYVTGFGNPDWARTHQAAMLTAPSVLAVLKGGATCVGKTVMDEMAY 87
Query: 661 SLIGENKHY 687 S+ GENKHY Sbjct: 88 SINGENKHY 96
>tr|B6ZLB9|B6ZLB9_TOBAC Indole-3-acetamide hydrolase (Fragment) OS=Nicotiana tabacum GN=NtAMI1 PE=4 SV=1 Length = 167
Score = 103 bits (256), Expect = 1e-20 Identities = 48/69 (69%), Positives = 54/69 (78%) Frame = +1
Query: 481 SNLTFAVKDIFDVEGFITGFGNPDWERTHEPALRTAPAVACLVQAGATCVGKTHMDEMAY 660 + LTFAVKDIFDVEG ITGFGNPDW +TH A TA V L++AGATC+ KT MDEMAY Sbjct: 28 NGLTFAVKDIFDVEGHITGFGNPDWAKTHSAATSTATTVLTLLKAGATCIAKTVMDEMAY 87
Query: 661 SLIGENKHY 687 S+ GEN HY Sbjct: 88 SINGENVHY 96
|