DK950323 |
Clone id |
TST38A01NGRL0008_F16 |
Library |
TST38 |
Length |
681 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_F16. 5' end sequence. |
Accession |
DK950323 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL3390Contig1 |
Sequence |
GTGCGTTGTCAACAAGGGTAAAGTCTGGGTGAAATCAAACCACGCTACAGCCAAAGGGGG AGGGGGCGGGAACGATAGGCGCCATCGCTGCATCTTTACTGTTCGTCTCCATCGTGGGCT GCTGTTCCACCTAGCGAATTGACCCCTTGTGCGTGATCCGTCTTCTCGATCGTGGCCTTT ACTCGCAGAAATGGGCCAGCAATCGCTGATCTACAGCTTTGTGGCTCGCGGCAGCGTAGT TCTGGCAGATTATTCCAGCTTCACTGGGAACTTCAGCACTATTGCAACTCAATGCCTGCA GAAGCTCCCCCCCAACAACAACAAGTTCACCTACACCTGCGACCAACACACTTTCAACTA TCTCGTCGAGGATGGCTTCACCTACATGGTAGTTGCAGATGAAACAGTAGGACGTCAGAC GCCGTTTGCCTTTCTAGAGCGTGTTAAGGATGATTTCAAGCGAAGATACGGTGGTGGCAA GGCGGATACTGCTGTTGCTAACAGCCTTGACAGAGAGTTTGGGCCTAAACTGAAGGACCA TATGCAGTACTGTATTGATAACCCCGATGAGATGAACAAGATTGCGAAAGTGAAGGCTCA AGTCTCCGAAGTAAAAGGCATTATGATGGAAAATATTGAAAAAGTTTTGGACAGGGGTGA AAAAATTGAACTGCTAGTTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O48850 |
Definition |
sp|O48850|VA725_ARATH Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana |
Align length |
163 |
Score (bit) |
267.0 |
E-value |
3.0e-71 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TFG8 |
Definition |
tr|A9TFG8|A9TFG8_PHYPA R-SNARE, VAMP72-family OS=Physcomitrella patens subsp. patens |
Align length |
163 |
Score (bit) |
294.0 |
E-value |
4.0e-78 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950323|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_F16, 5' (681 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TFG8|A9TFG8_PHYPA R-SNARE, VAMP72-family OS=Physcomitrella ... 294 4e-78 tr|A9TZW1|A9TZW1_PHYPA R-SNARE, VAMP72-family OS=Physcomitrella ... 290 6e-77 tr|A9NNA8|A9NNA8_PICSI Putative uncharacterized protein OS=Picea... 281 3e-74 tr|B6T746|B6T746_MAIZE Vesicle-associated membrane protein 725 O... 275 1e-72 tr|B3TLT3|B3TLT3_ELAGV Synaptobrevin 1 OS=Elaeis guineensis var.... 275 2e-72 tr|Q69WS1|Q69WS1_ORYSJ Os07g0194000 protein OS=Oryza sativa subs... 274 3e-72 tr|A7QTI2|A7QTI2_VITVI Chromosome undetermined scaffold_168, who... 273 6e-72 tr|B6TB83|B6TB83_MAIZE Vesicle-associated membrane protein 725 O... 273 7e-72 tr|B4FQX6|B4FQX6_MAIZE Putative uncharacterized protein OS=Zea m... 273 7e-72 tr|Q84SZ1|Q84SZ1_ORYSJ Os03g0803000 protein OS=Oryza sativa subs... 270 5e-71 tr|B8ALR6|B8ALR6_ORYSI Putative uncharacterized protein OS=Oryza... 270 5e-71 tr|A3ANR5|A3ANR5_ORYSJ Putative uncharacterized protein OS=Oryza... 270 5e-71 tr|B4FP96|B4FP96_MAIZE Putative uncharacterized protein OS=Zea m... 270 6e-71 tr|A7QKU3|A7QKU3_VITVI Chromosome undetermined scaffold_114, who... 270 6e-71 tr|Q7X9C5|Q7X9C5_PYRPY Synptobrevin-related protein (Fragment) O... 269 1e-70 tr|B7FI10|B7FI10_MEDTR Putative uncharacterized protein OS=Medic... 265 3e-69 tr|B7FGH4|B7FGH4_MEDTR Putative uncharacterized protein OS=Medic... 265 3e-69 tr|B8B859|B8B859_ORYSI Putative uncharacterized protein OS=Oryza... 263 6e-69 tr|A3BHG6|A3BHG6_ORYSJ Putative uncharacterized protein OS=Oryza... 263 6e-69 tr|Q681L9|Q681L9_ARATH Putative vesicle-associated membrane prot... 262 1e-68 tr|Q681H0|Q681H0_ARATH Putative vesicle-associated membrane prot... 262 1e-68 tr|A9P2K7|A9P2K7_PICSI Putative uncharacterized protein OS=Picea... 261 4e-68 tr|A9P970|A9P970_POPTR Putative uncharacterized protein OS=Popul... 257 4e-67 tr|A9NUI3|A9NUI3_PICSI Putative uncharacterized protein OS=Picea... 256 9e-67 tr|A9NRR4|A9NRR4_PICSI Putative uncharacterized protein OS=Picea... 255 2e-66 tr|B4F9M1|B4F9M1_MAIZE Putative uncharacterized protein OS=Zea m... 253 6e-66 tr|Q2V436|Q2V436_ARATH Uncharacterized protein At2g33120.2 OS=Ar... 253 1e-65 tr|A5BQJ0|A5BQJ0_VITVI Putative uncharacterized protein (Chromos... 251 2e-65 tr|A5BSN2|A5BSN2_VITVI Putative uncharacterized protein OS=Vitis... 241 2e-62 tr|B7FI15|B7FI15_MEDTR Putative uncharacterized protein OS=Medic... 235 2e-60
>tr|A9TFG8|A9TFG8_PHYPA R-SNARE, VAMP72-family OS=Physcomitrella patens subsp. patens GN=VAMP72A1 PE=4 SV=1 Length = 222
Score = 294 bits (752), Expect = 4e-78 Identities = 137/163 (84%), Positives = 156/163 (95%) Frame = +2
Query: 191 MGQQSLIYSFVARGSVVLADYSSFTGNFSTIATQCLQKLPPNNNKFTYTCDQHTFNYLVE 370 MG QSLIYSFVARGS VLA+Y++F+GNFSTIA QCLQKLPPNNNKFTYTCD+HTFNYLVE Sbjct: 1 MGTQSLIYSFVARGSTVLAEYTAFSGNFSTIAVQCLQKLPPNNNKFTYTCDRHTFNYLVE 60
Query: 371 DGFTYMVVADETVGRQTPFAFLERVKDDFKRRYGGGKADTAVANSLDREFGPKLKDHMQY 550 +G+TY+VVADE GRQ PFAFLERVK+DFKRRY GGKAD+A+ANSLD+EFGPKLKDHMQY Sbjct: 61 EGYTYLVVADEEFGRQIPFAFLERVKEDFKRRYAGGKADSAIANSLDKEFGPKLKDHMQY 120
Query: 551 CIDNPDEMNKIAKVKAQVSEVKGIMMENIEKVLDRGEKIELLV 679 C+D+PDEMNKI+K+K+QV+EVKGIMM+NIEKVLDRGEKIELLV Sbjct: 121 CVDHPDEMNKISKIKSQVAEVKGIMMDNIEKVLDRGEKIELLV 163
>tr|A9TZW1|A9TZW1_PHYPA R-SNARE, VAMP72-family OS=Physcomitrella patens subsp. patens GN=VAMP72A2 PE=4 SV=1 Length = 220
Score = 290 bits (742), Expect = 6e-77 Identities = 135/163 (82%), Positives = 155/163 (95%) Frame = +2
Query: 191 MGQQSLIYSFVARGSVVLADYSSFTGNFSTIATQCLQKLPPNNNKFTYTCDQHTFNYLVE 370 MG QSLIYSFVARG VLA+Y++F+GNFSTIA QCLQKLPPNNNKFTYTCD+HTFNYLVE Sbjct: 1 MGTQSLIYSFVARGPTVLAEYTAFSGNFSTIAVQCLQKLPPNNNKFTYTCDRHTFNYLVE 60
Query: 371 DGFTYMVVADETVGRQTPFAFLERVKDDFKRRYGGGKADTAVANSLDREFGPKLKDHMQY 550 +G+TY+VVADE GRQ PFAFLERVK+DFKRRY GGKAD+A+A+SLD+EFGPKLKDHMQY Sbjct: 61 EGYTYLVVADEEFGRQIPFAFLERVKEDFKRRYAGGKADSAIAHSLDKEFGPKLKDHMQY 120
Query: 551 CIDNPDEMNKIAKVKAQVSEVKGIMMENIEKVLDRGEKIELLV 679 C+D+PDEMNKI+K+K+QV+EVKGIMM+NIEKVLDRGEKIELLV Sbjct: 121 CVDHPDEMNKISKIKSQVAEVKGIMMDNIEKVLDRGEKIELLV 163
>tr|A9NNA8|A9NNA8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 222
Score = 281 bits (719), Expect = 3e-74 Identities = 133/163 (81%), Positives = 151/163 (92%) Frame = +2
Query: 191 MGQQSLIYSFVARGSVVLADYSSFTGNFSTIATQCLQKLPPNNNKFTYTCDQHTFNYLVE 370 MGQQSLIYSFVARG+VVLA+Y+ F GNF+TIA QCLQKLP +NNKFTY CD HTFNYLVE Sbjct: 1 MGQQSLIYSFVARGTVVLAEYTEFKGNFTTIAAQCLQKLPASNNKFTYNCDNHTFNYLVE 60
Query: 371 DGFTYMVVADETVGRQTPFAFLERVKDDFKRRYGGGKADTAVANSLDREFGPKLKDHMQY 550 DGF Y VVADE+VGRQ P AFLERVK+DFKRRYGGG+ADTAV NSL+R+FG KLK+HMQY Sbjct: 61 DGFAYCVVADESVGRQVPMAFLERVKEDFKRRYGGGRADTAVGNSLNRDFGSKLKEHMQY 120
Query: 551 CIDNPDEMNKIAKVKAQVSEVKGIMMENIEKVLDRGEKIELLV 679 C+D+P+E++K+AKVKAQVSEVKG+MMENIEKVLDRGEKIELLV Sbjct: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLV 163
>tr|B6T746|B6T746_MAIZE Vesicle-associated membrane protein 725 OS=Zea mays PE=2 SV=1 Length = 222
Score = 275 bits (704), Expect = 1e-72 Identities = 131/163 (80%), Positives = 150/163 (92%) Frame = +2
Query: 191 MGQQSLIYSFVARGSVVLADYSSFTGNFSTIATQCLQKLPPNNNKFTYTCDQHTFNYLVE 370 MGQQSLIY+FVARG+VVLA+Y+ FTGNF+TIA QCLQKLP +NNKFTY CD HTFNYLVE Sbjct: 1 MGQQSLIYAFVARGTVVLAEYTEFTGNFTTIAAQCLQKLPASNNKFTYNCDGHTFNYLVE 60
Query: 371 DGFTYMVVADETVGRQTPFAFLERVKDDFKRRYGGGKADTAVANSLDREFGPKLKDHMQY 550 DGFTY VVA E+VGRQ P AFL+RVK+DF ++YGGGKA TA ANSL REFGPKLK+HMQY Sbjct: 61 DGFTYCVVAVESVGRQIPIAFLDRVKEDFTKKYGGGKAATAAANSLKREFGPKLKEHMQY 120
Query: 551 CIDNPDEMNKIAKVKAQVSEVKGIMMENIEKVLDRGEKIELLV 679 C+D+P+E++K+AKVKAQVSEVKG+MMENIEKVLDRGEKIELLV Sbjct: 121 CVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLV 163
>tr|B3TLT3|B3TLT3_ELAGV Synaptobrevin 1 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 220
Score = 275 bits (703), Expect = 2e-72 Identities = 129/163 (79%), Positives = 152/163 (93%) Frame = +2
Query: 191 MGQQSLIYSFVARGSVVLADYSSFTGNFSTIATQCLQKLPPNNNKFTYTCDQHTFNYLVE 370 MGQQ+LIYSFVARG+V+LA+Y+ FTGNF++IA+QCLQKLP +NNKFTY CD HTFNYLVE Sbjct: 1 MGQQTLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPSSNNKFTYNCDSHTFNYLVE 60
Query: 371 DGFTYMVVADETVGRQTPFAFLERVKDDFKRRYGGGKADTAVANSLDREFGPKLKDHMQY 550 DGFTY VVA E+ GRQ P AFLERVK+DFK+RYGGGKA TA ANSL+REFGPKLK+HMQY Sbjct: 61 DGFTYCVVAVESAGRQIPIAFLERVKEDFKKRYGGGKAATASANSLNREFGPKLKEHMQY 120
Query: 551 CIDNPDEMNKIAKVKAQVSEVKGIMMENIEKVLDRGEKIELLV 679 C+D+P+E++K++KVKAQVSEVKG+MMENIEKVL+RGEKIELLV Sbjct: 121 CVDHPEEISKLSKVKAQVSEVKGVMMENIEKVLERGEKIELLV 163
>tr|Q69WS1|Q69WS1_ORYSJ Os07g0194000 protein OS=Oryza sativa subsp. japonica GN=OJ1118_E12.19 PE=2 SV=1 Length = 220
Score = 274 bits (701), Expect = 3e-72 Identities = 131/163 (80%), Positives = 150/163 (92%) Frame = +2
Query: 191 MGQQSLIYSFVARGSVVLADYSSFTGNFSTIATQCLQKLPPNNNKFTYTCDQHTFNYLVE 370 MGQQSLIY+FVARG+VVLA+Y+ FTGNF+TIA QCLQKLP +NNKFTY CD HTFNYLVE Sbjct: 1 MGQQSLIYAFVARGTVVLAEYTEFTGNFTTIAAQCLQKLPASNNKFTYNCDGHTFNYLVE 60
Query: 371 DGFTYMVVADETVGRQTPFAFLERVKDDFKRRYGGGKADTAVANSLDREFGPKLKDHMQY 550 DGFTY VVA E+VGRQ P AFL+RVK+DF +RYGGGKA TA ANSL+REFG KLK+HMQY Sbjct: 61 DGFTYCVVAVESVGRQIPIAFLDRVKEDFTKRYGGGKAATAAANSLNREFGSKLKEHMQY 120
Query: 551 CIDNPDEMNKIAKVKAQVSEVKGIMMENIEKVLDRGEKIELLV 679 C+D+P+E++K+AKVKAQVSEVKG+MMENIEKVLDRGEKIELLV Sbjct: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLV 163
>tr|A7QTI2|A7QTI2_VITVI Chromosome undetermined scaffold_168, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006343001 PE=4 SV=1 Length = 220
Score = 273 bits (699), Expect = 6e-72 Identities = 129/163 (79%), Positives = 150/163 (92%) Frame = +2
Query: 191 MGQQSLIYSFVARGSVVLADYSSFTGNFSTIATQCLQKLPPNNNKFTYTCDQHTFNYLVE 370 +GQQSLIYSFVARG+V+LA+Y+ FTGNF++IA QCLQKLP +NNKFTY CD HTFNYLVE Sbjct: 2 VGQQSLIYSFVARGTVILAEYTEFTGNFTSIAAQCLQKLPASNNKFTYNCDGHTFNYLVE 61
Query: 371 DGFTYMVVADETVGRQTPFAFLERVKDDFKRRYGGGKADTAVANSLDREFGPKLKDHMQY 550 +GFTY VVA E+ GRQ P AFLERVKDDF +RYGGGKA TAVAN L++EFGPKLK+HMQY Sbjct: 62 NGFTYCVVAVESAGRQIPIAFLERVKDDFNKRYGGGKAATAVANGLNKEFGPKLKEHMQY 121
Query: 551 CIDNPDEMNKIAKVKAQVSEVKGIMMENIEKVLDRGEKIELLV 679 C+D+P+E++K+AKVKAQVSEVKG+MMENIEKVLDRGEKIELLV Sbjct: 122 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLV 164
>tr|B6TB83|B6TB83_MAIZE Vesicle-associated membrane protein 725 OS=Zea mays PE=2 SV=1 Length = 304
Score = 273 bits (698), Expect = 7e-72 Identities = 130/163 (79%), Positives = 150/163 (92%) Frame = +2
Query: 191 MGQQSLIYSFVARGSVVLADYSSFTGNFSTIATQCLQKLPPNNNKFTYTCDQHTFNYLVE 370 MGQQSLIY+FVARG+VVLA+Y+ FTGNF+TIA QCLQKLP +NNKFTY CD HTFNYLVE Sbjct: 1 MGQQSLIYAFVARGTVVLAEYTEFTGNFTTIAAQCLQKLPASNNKFTYNCDGHTFNYLVE 60
Query: 371 DGFTYMVVADETVGRQTPFAFLERVKDDFKRRYGGGKADTAVANSLDREFGPKLKDHMQY 550 DGFTY VVA E+VGRQ P AFL+RVK+DF ++YGGGKA TA ANSL+REFG KLK+HMQY Sbjct: 61 DGFTYCVVAVESVGRQIPIAFLDRVKEDFTKKYGGGKAATAAANSLNREFGSKLKEHMQY 120
Query: 551 CIDNPDEMNKIAKVKAQVSEVKGIMMENIEKVLDRGEKIELLV 679 C+D+P+E++K+AKVKAQVSEVKG+MMENIEKVLDRGEKIELLV Sbjct: 121 CVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLV 163
>tr|B4FQX6|B4FQX6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 222
Score = 273 bits (698), Expect = 7e-72 Identities = 130/163 (79%), Positives = 150/163 (92%) Frame = +2
Query: 191 MGQQSLIYSFVARGSVVLADYSSFTGNFSTIATQCLQKLPPNNNKFTYTCDQHTFNYLVE 370 MGQQSLIY+FVARG+VVLA+Y+ FTGNF+TIA QCLQKLP +NNKFTY CD HTFNYLVE Sbjct: 1 MGQQSLIYAFVARGTVVLAEYTEFTGNFTTIAAQCLQKLPASNNKFTYNCDGHTFNYLVE 60
Query: 371 DGFTYMVVADETVGRQTPFAFLERVKDDFKRRYGGGKADTAVANSLDREFGPKLKDHMQY 550 DGFTY VVA E+VGRQ P AFL+RVK+DF ++YGGGKA TA ANSL+REFG KLK+HMQY Sbjct: 61 DGFTYCVVAVESVGRQIPIAFLDRVKEDFTKKYGGGKAATAAANSLNREFGSKLKEHMQY 120
Query: 551 CIDNPDEMNKIAKVKAQVSEVKGIMMENIEKVLDRGEKIELLV 679 C+D+P+E++K+AKVKAQVSEVKG+MMENIEKVLDRGEKIELLV Sbjct: 121 CVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLV 163
>tr|Q84SZ1|Q84SZ1_ORYSJ Os03g0803000 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0087C10.9 PE=4 SV=1 Length = 220
Score = 270 bits (691), Expect = 5e-71 Identities = 128/163 (78%), Positives = 149/163 (91%) Frame = +2
Query: 191 MGQQSLIYSFVARGSVVLADYSSFTGNFSTIATQCLQKLPPNNNKFTYTCDQHTFNYLVE 370 MGQQSLIY+FVARG+V+LA+Y+ FTGNF+TIA+QCL KLP +NNKFTY CD HTFNYLVE Sbjct: 1 MGQQSLIYAFVARGTVILAEYTEFTGNFTTIASQCLMKLPASNNKFTYNCDGHTFNYLVE 60
Query: 371 DGFTYMVVADETVGRQTPFAFLERVKDDFKRRYGGGKADTAVANSLDREFGPKLKDHMQY 550 DGFTY VVA E+VGRQ P AFL+RVKDDF +RY GGKA TA ANSL+R+FG KLK+HMQY Sbjct: 61 DGFTYCVVAVESVGRQIPIAFLDRVKDDFTKRYAGGKAATAAANSLNRDFGSKLKEHMQY 120
Query: 551 CIDNPDEMNKIAKVKAQVSEVKGIMMENIEKVLDRGEKIELLV 679 C+D+P+E++K+AKVKAQVSEVKG+MMENIEKVLDRGEKIELLV Sbjct: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLV 163
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