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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950364
Clone id TST38A01NGRL0008_H09
Library
Length 558
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_H09. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
CAGTCGGCACCATTCAATTTGCGAGCTGATCTATCCTCTCAAAACTGCAGGTGGGCGAGC
AATCATCTGCGTAGCCAACCTGCAAAGCGAGTATCGGTTTGTATGGCGGATGTCCTGCTG
CAAGAGGTGGCCCAAGCTCTCACCCAGGTCGCCGATCGGACTCTGCGTCCGTTGCTGAGG
GGCCAACCTCAACAATTTTATAAAGGGGCTGAAGGGCGAGCGGCTCCACGCCTCTTGCTC
TTGCAGTGGCGATCCAGGGATGCATTTCAGGATTTTGGAGAATTCTACTGCATTACGCTC
ATCCTGGATGAGCAATCTGCTCTGGCCTCCTACTTCATCGGCCTCTTCTCCGAGCTTGAC
TGGTTGATAAATGTCTTGGGCGGCTCTAGTTCAGCTCCGCTCCGTCGTCAAGTACGCCGC
ATTTCTGCCACGTGTCGCTTGTTGTATGCCGCACGCAGATTGGTGCCACGGCAAGATGTT
GGCAACAATTCTGGACAGTTCAAGCGAGTTGGGCAAAGTGGACGCATGTTCTCTAGCAAT
GAGCTCCATTGCAAGATG
■■Homology search results ■■ -
sp_hit_id P00729
Definition sp|P00729|CBPY_YEAST Carboxypeptidase Y OS=Saccharomyces cerevisiae
Align length 94
Score (bit) 32.7
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950364|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_H09, 5'
         (558 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P00729|CBPY_YEAST Carboxypeptidase Y OS=Saccharomyces cerevis...    33   1.2  
sp|P39059|COFA1_HUMAN Collagen alpha-1(XV) chain OS=Homo sapiens...    31   3.6  
sp|Q5J3M3|V1B13_RAT Vomeronasal type-1 receptor B13 OS=Rattus no...    31   3.6  
sp|Q5J3L7|VN1B5_RAT Vomeronasal type-1 receptor B5 OS=Rattus nor...    31   4.7  
sp|Q9HCH0|K1602_HUMAN Uncharacterized protein KIAA1602 OS=Homo s...    30   6.1  
sp|P50357|NODC_RHISN N-acetylglucosaminyltransferase OS=Rhizobiu...    30   8.1  

>sp|P00729|CBPY_YEAST Carboxypeptidase Y OS=Saccharomyces cerevisiae
           GN=PRC1 PE=1 SV=1
          Length = 532

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
 Frame = -1

Query: 369 YQPVKLGEEADEVGGQSRLLIQDERNAVEFSKILKCIP--GSPLQEQEAWSRSPFSPFIK 196
           Y+P+  GE     GG+  +L  +E +A+E S + +C+    S    Q  WS  P + +  
Sbjct: 299 YEPMACGE-----GGEPSVLPSEECSAMEDS-LERCLGLIESCYDSQSVWSCVPATIYCN 352

Query: 195 LLRLAPQQRTQSPIGDL-----GESLGHLLQQDI 109
             +LAP QRT   + D+     G +L +   QDI
Sbjct: 353 NAQLAPYQRTGRNVYDIRKDCEGGNLCYPTLQDI 386


>sp|P39059|COFA1_HUMAN Collagen alpha-1(XV) chain OS=Homo sapiens
           GN=COL15A1 PE=1 SV=2
          Length = 1388

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 16/94 (17%)
 Frame = +3

Query: 75  PTCKASIGLYGGCPAARGGPSSHPGR-----------RSDSASVAEGPTSTIL*RG*RAS 221
           P+  + +  YGG PA   GP ++ GR           R  + SV   P+ST   RG    
Sbjct: 52  PSSVSFVTGYGGFPAYSFGPGANVGRPARTLIPSTFFRDFAISVVVKPSST---RGGVLF 108

Query: 222 GSTP-----LALAVAIQGCISGFWRILLHYAHPG 308
             T      + L + + G   G  RI+L+Y  PG
Sbjct: 109 AITDAFQKVIYLGLRLSGVEDGHQRIILYYTEPG 142


>sp|Q5J3M3|V1B13_RAT Vomeronasal type-1 receptor B13 OS=Rattus
           norvegicus GN=V1rb13 PE=2 SV=1
          Length = 310

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 247 WRSRDAFQDFGEFYCITLILDEQSALASYFIGLFSE 354
           + SR  F+D   FYC+ +I+    A  S F+ +FSE
Sbjct: 258 FHSRTKFKDGSIFYCVQIIVSHSYATISPFVFVFSE 293


>sp|Q5J3L7|VN1B5_RAT Vomeronasal type-1 receptor B5 OS=Rattus
           norvegicus GN=V1rb5 PE=2 SV=1
          Length = 310

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 253 SRDAFQDFGEFYCITLILDEQSALASYFIGLFSE 354
           SR  F+D   FYC+ +I+    A  S F+ +F+E
Sbjct: 260 SRMKFKDGSTFYCVQIIVSHSYATVSSFVFIFTE 293


>sp|Q9HCH0|K1602_HUMAN Uncharacterized protein KIAA1602 OS=Homo
            sapiens GN=KIAA1602 PE=1 SV=2
          Length = 1330

 Score = 30.4 bits (67), Expect = 6.1
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +3

Query: 75   PTCKASIGLYG---GCPAARGGPSSHPGRRSDSAS 170
            P C    GL G   GC    G PSS PGRR ++ S
Sbjct: 1061 PACGPRNGLVGPLQGCGKPPGKPSSEPGRREETPS 1095


>sp|P50357|NODC_RHISN N-acetylglucosaminyltransferase OS=Rhizobium
           sp. (strain NGR234) GN=nodC PE=3 SV=2
          Length = 413

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -1

Query: 255 GSPLQEQEAWSRSPFSPFIKLLRLAPQQRTQSPIGDLGESLGHLL 121
           G+ L++Q  W+RS F   +  LRL P       +  +G++LG LL
Sbjct: 272 GAYLRQQLRWARSTFRDTLLALRLLPGLDRYLTLDVIGQNLGPLL 316
tr_hit_id Q01UZ9
Definition tr|Q01UZ9|Q01UZ9_SOLUE Cobalamin synthesis protein, P47K OS=Solibacter usitatus (strain Ellin6076)
Align length 109
Score (bit) 39.3
E-value 0.15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950364|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_H09, 5'
         (558 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q01UZ9|Q01UZ9_SOLUE Cobalamin synthesis protein, P47K OS=Soli...    39   0.15 
tr|B5I0L5|B5I0L5_9ACTO Peptidoglycan-binding protein OS=Streptom...    36   1.2  
tr|B5ZE34|B5ZE34_GLUDA Putative uncharacterized protein OS=Gluco...    36   1.6  
tr|Q4DUK3|Q4DUK3_TRYCR Putative uncharacterized protein OS=Trypa...    35   2.1  
tr|B1VV13|B1VV13_STRGG Putative Mrr restriction system protein O...    35   3.6  
tr|B3MM92|B3MM92_DROAN GF14343 OS=Drosophila ananassae GN=GF1434...    35   3.6  
tr|Q693B4|Q693B4_9ALTE 1,4-beta-D-glucan glucohydrolase OS=Micro...    34   4.7  
tr|Q2JT39|Q2JT39_SYNJA Transporter, TonB-dependent heme/hemoglob...    34   6.1  
tr|Q3RD84|Q3RD84_XYLFA Phage-related protein OS=Xylella fastidio...    34   6.2  
tr|Q3R451|Q3R451_XYLFA Phage-related protein OS=Xylella fastidio...    34   6.2  
tr|A4VMY3|A4VMY3_PSEU5 Transcriptional regulator, LysR family OS...    33   8.1  

>tr|Q01UZ9|Q01UZ9_SOLUE Cobalamin synthesis protein, P47K
           OS=Solibacter usitatus (strain Ellin6076) GN=Acid_5569
           PE=4 SV=1
          Length = 310

 Score = 39.3 bits (90), Expect = 0.15
 Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
 Frame = +1

Query: 85  KRVSVCMADVLLQEVAQALTQVADRTLRPLLRGQPQQFYKGAEGRAAPRLLLLQWRSRDA 264
           +RV+    +V+  E   + T +A  TLRPLLR  P ++      R AP  ++   R  + 
Sbjct: 78  ERVAAQQPEVIFAEAVGSCTDIAATTLRPLLRDYPGRY------RIAPLTVVAHERPEND 131

Query: 265 FQDFGEFYCITLILDEQSALASYFIGLFSEL-DWLINVLGGSSSAPLRR 408
              F        + D Q A A   +G   +  +WL  VLGG  +A  RR
Sbjct: 132 DLRF--------LYDHQVAEADIVVGRDVDAEEWLAEVLGGKIAAGGRR 172


>tr|B5I0L5|B5I0L5_9ACTO Peptidoglycan-binding protein
           OS=Streptomyces sviceus ATCC 29083 GN=SSEG_05112 PE=4
           SV=1
          Length = 225

 Score = 36.2 bits (82), Expect = 1.2
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +3

Query: 30  SILSKLQVGEQSSA*PTCKASIGLYGGCPAARGGPSSHPGRRSDSASVAEGPTST 194
           ++ +K+Q  +   A PTC A  G YG  PAA  GP+      + +A      T T
Sbjct: 111 AVATKVQGAQGWGAWPTCSARAGAYGNAPAASSGPAGTSSGTTKAAPAEPAKTPT 165


>tr|B5ZE34|B5ZE34_GLUDA Putative uncharacterized protein
           OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 /
           DSM 5601 / PAl5) GN=Gdia_2160 PE=3 SV=1
          Length = 708

 Score = 35.8 bits (81), Expect = 1.6
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +1

Query: 67  LRSQPAKRVSVCMADVLLQ-EVAQALTQVADRTLRPLLRGQPQQFYKGAEGRAAPRLLLL 243
           +R  PA+R+ +C A  L    +A AL      T+     G  +    G+E  +A RL  L
Sbjct: 554 MRDGPARRIRLCRAVALAALALAMALLPGLGGTVSG---GAARLAADGSEPFSASRLATL 610

Query: 244 QWRSRDAFQDFGEFYCITLILDEQSALAS 330
           + + R  F D    +CI+ +++E+ AL+S
Sbjct: 611 RAQGRPVFVDMTAAWCISCLVNERVALSS 639


>tr|Q4DUK3|Q4DUK3_TRYCR Putative uncharacterized protein
            OS=Trypanosoma cruzi GN=Tc00.1047053511245.170 PE=4 SV=1
          Length = 1233

 Score = 35.4 bits (80), Expect = 2.1
 Identities = 32/117 (27%), Positives = 46/117 (39%)
 Frame = -1

Query: 477  ILPWHQSACGIQQATRGRNAAYLTTERS*TRAAQDIYQPVKLGEEADEVGGQSRLLIQDE 298
            +LP   +A  ++Q  +   A+  T  RS    +   YQ V LG      GG+SRL     
Sbjct: 902  LLPASTAALKLEQQQQQHGASRQTPLRSREVRSVPTYQEVMLGLAGHPGGGRSRL----- 956

Query: 297  RNAVEFSKILKCIPGSPLQEQEAWSRSPFSPFIKLLRLAPQQRTQSPIGDLGESLGH 127
                        +PG  ++      R P        R A QQ  + P GD G+ +GH
Sbjct: 957  ------------VPGGRVRAAPHRDRQP-------RRAAQQQSPRRPGGDAGDGVGH 994


>tr|B1VV13|B1VV13_STRGG Putative Mrr restriction system protein
           OS=Streptomyces griseus subsp. griseus (strain JCM 4626
           / NBRC 13350) GN=SGR_1168 PE=4 SV=1
          Length = 261

 Score = 34.7 bits (78), Expect = 3.6
 Identities = 20/45 (44%), Positives = 21/45 (46%)
 Frame = -3

Query: 241 RARGVEPLALQPLYKIVEVGPSATDAESDRRPG*ELGPPLAAGHP 107
           RAR V     Q  Y IVEVG +  DA    R    L PP   GHP
Sbjct: 75  RARRVAEAVTQAAYGIVEVGLAELDAAEAARAEARLAPPEPTGHP 119


>tr|B3MM92|B3MM92_DROAN GF14343 OS=Drosophila ananassae GN=GF14343
           PE=4 SV=1
          Length = 524

 Score = 34.7 bits (78), Expect = 3.6
 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = +1

Query: 247 WRSRDAFQDFGEFYCITLILDEQSALASYFIGLFSELDWLI-NVLGGSSSAPLRRQVRRI 423
           WR RDA  D G    +  ++  Q +  S +  + S+L WL+   L      P  + V RI
Sbjct: 127 WRIRDAIDDSGLLNAMVKLMYNQYSEISRYKSMMSQLVWLLYQFLRCKVPGPSEKTVARI 186

Query: 424 SATCRLLYAARRLVPRQDV 480
           + T      A +L P QDV
Sbjct: 187 ART-----VATQLNPSQDV 200


>tr|Q693B4|Q693B4_9ALTE 1,4-beta-D-glucan glucohydrolase
           OS=Microbulbifer hydrolyticus GN=celA PE=4 SV=1
          Length = 882

 Score = 34.3 bits (77), Expect = 4.7
 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +1

Query: 7   APFNLRADLSSQNCRWASNHLRSQPAKRVSVCMADVLLQEVAQALTQVADRTLRPLLRGQ 186
           AP+ L    S Q+  W S +L S     ++V   D+L QE A+ALT    R    LL+ Q
Sbjct: 710 APWKLFIADSEQDPLWVSGNLASSADDNITVASIDMLSQEDARALTWKGLRAGSVLLQTQ 769

Query: 187 -PQQFYKGAEGRAA 225
            PQ   +  E  AA
Sbjct: 770 KPQDLSRYLEEGAA 783


>tr|Q2JT39|Q2JT39_SYNJA Transporter, TonB-dependent heme/hemoglobin
           receptor family OS=Synechococcus sp. (strain JA-3-3Ab)
           GN=CYA_2031 PE=3 SV=1
          Length = 806

 Score = 33.9 bits (76), Expect = 6.1
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = -3

Query: 286 RILQNPEMHPWIATARARGVEPLALQPLYKIVEVGPSATD-AESDRRPG*ELGPPLAAGH 110
           R L NP++ P  +     G+  + LQ  + +     +  D  E+ RR G E  PP   G 
Sbjct: 570 RTLSNPDLRPETSQGFEVGLRGIYLQASFSLAAYYNTYNDFIEAFRRVGSEPSPPGPPGS 629

Query: 109 PPYKPILALQ 80
           PP  P++  Q
Sbjct: 630 PPPPPVILFQ 639


>tr|Q3RD84|Q3RD84_XYLFA Phage-related protein OS=Xylella fastidiosa
           Dixon GN=XfasaDRAFT_0613 PE=4 SV=1
          Length = 425

 Score = 33.9 bits (76), Expect = 6.2
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
 Frame = +1

Query: 148 VADRTLRPLLRGQPQQFYKGAEGRAAPRLLLLQWRSRDAFQD----FGEFYCITLILDEQ 315
           + DR    LL GQP   YK  +GR  PR  + +  + DA +     F + Y ++LI    
Sbjct: 293 IRDRAAAELLSGQPVPGYKVVQGRHGPRRWVDETAAEDALKQLRIKFKDMYDVSLI-SPT 351

Query: 316 SALASYFIGLFSELDW 363
            A   Y  G+  +  W
Sbjct: 352 RAEKLYQAGVIGDRQW 367


>tr|Q3R451|Q3R451_XYLFA Phage-related protein OS=Xylella fastidiosa
           Ann-1 GN=XfasoDRAFT_2201 PE=4 SV=1
          Length = 425

 Score = 33.9 bits (76), Expect = 6.2
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
 Frame = +1

Query: 148 VADRTLRPLLRGQPQQFYKGAEGRAAPRLLLLQWRSRDAFQD----FGEFYCITLILDEQ 315
           + DR    LL GQP   YK  +GR  PR  + +  + DA +     F + Y ++LI    
Sbjct: 293 IRDRAAAELLSGQPVPGYKVVQGRHGPRRWVDETAAEDALKQLRIKFKDMYDVSLI-SPT 351

Query: 316 SALASYFIGLFSELDW 363
            A   Y  G+  +  W
Sbjct: 352 RAEKLYQAGVIGDRQW 367