DK950370 |
Clone id |
TST38A01NGRL0008_H16 |
Library |
TST38 |
Length |
477 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_H16. 5' end sequence. |
Accession |
DK950370 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL21Contig1 |
Sequence |
GGTATCTTCAAAAGTGGCAACCCCTCTCAGCGTGCTCGAGCCATAGTTTCTGCTGTGACT CACTTCAATGACCCTAGCATTATAGCAGATGTCAGCTGCGGTTTGGGTGAAGCTATGGTG GGTATCAATCTTAATGACAAGAAAGTTGAGCGCTTTGCTGCAAGGTCTGATTAATGTGGA GAATGGATTCGTACAAATGCTGTATGTGTTGTGTGTCACTACGGGTGAGGCATCCGAGGC TTGTGTTCAAGCCCTTGTTGTTCAGCAAGTTGTTATGGTAGATAGTACTTTAGTTCACTT AGAACTCTTTGTCTGATTGCCTTTGGTTATTGGCAGTGCTGGTAGACCATTTAACGGAAC CATTCATTCTCACTCCAGCAGAACCTGAGCAACCTGGGAACATGGAAACTGGAATTGTAA TGCTTACAACAGAAAATATAAATAAGCTTTTTGATAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q39963 |
Definition |
sp|Q39963|PDX1_HEVBR Probable pyridoxal biosynthesis protein PDX1 OS=Hevea brasiliensis |
Align length |
57 |
Score (bit) |
96.7 |
E-value |
4.0e-20 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FRZ2 |
Definition |
tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
57 |
Score (bit) |
95.1 |
E-value |
2.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950370|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_H16, 5' (455 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 95 2e-18 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 95 2e-18 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 94 3e-18 tr|A7NYE9|A7NYE9_VITVI Chromosome chr6 scaffold_3, whole genome ... 94 3e-18 tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 93 6e-18 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 92 1e-17 tr|A3BFP4|A3BFP4_ORYSJ Putative uncharacterized protein OS=Oryza... 92 1e-17 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 92 1e-17 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 91 4e-17 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 90 6e-17 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 89 8e-17 tr|B2BGT9|B2BGT9_OLEEU Putative SNZ1 protein (Fragment) OS=Olea ... 89 1e-16 tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 89 1e-16 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 88 2e-16 tr|A3C1S6|A3C1S6_ORYSJ Putative uncharacterized protein OS=Oryza... 88 2e-16 tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 87 3e-16 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 86 9e-16 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 85 2e-15 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 78 3e-13 tr|A4RTQ1|A4RTQ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 78 3e-13 tr|Q01DD0|Q01DD0_OSTTA Sor-like protein (ISS) OS=Ostreococcus ta... 75 1e-12 tr|B2QH76|B2QH76_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 75 2e-12 tr|B7A686|B7A686_THEAQ Pyridoxine biosynthesis protein OS=Thermu... 72 1e-11 tr|A4FB94|A4FB94_SACEN Putative pyridoxine biosynthesis protein ... 72 1e-11 tr|A8KZF1|A8KZF1_FRASN Pyridoxine biosynthesis protein OS=Franki... 72 2e-11 tr|A4QCC3|A4QCC3_CORGB Putative uncharacterized protein OS=Coryn... 72 2e-11 tr|A7BCM7|A7BCM7_9ACTO Putative uncharacterized protein OS=Actin... 70 5e-11 tr|A4AJX6|A4AJX6_9ACTN Pyridoxine biosynthesis protein OS=marine... 70 5e-11 tr|A8SM32|A8SM32_9FIRM Putative uncharacterized protein OS=Parvi... 70 7e-11 tr|B1VDJ3|B1VDJ3_CORU7 Putative pyridoxine biosynthesis protein ... 69 9e-11
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 95.1 bits (235), Expect = 2e-18 Identities = 45/57 (78%), Positives = 54/57 (94%) Frame = +1
Query: 1 GIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 171 GIFKSG+P++RARAIV AVTH++DP+I+ADVS GLGEAMVGINLND KVER+AARS+ Sbjct: 261 GIFKSGDPARRARAIVQAVTHYSDPTILADVSTGLGEAMVGINLNDPKVERYAARSE 317
>tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 95.1 bits (235), Expect = 2e-18 Identities = 45/57 (78%), Positives = 54/57 (94%) Frame = +1
Query: 1 GIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 171 GIFKSG+P++RARAIV AVTH++DP+I+ADVS GLGEAMVGINLND KVER+AARS+ Sbjct: 324 GIFKSGDPARRARAIVQAVTHYSDPTILADVSTGLGEAMVGINLNDPKVERYAARSE 380
>tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 94.0 bits (232), Expect = 3e-18 Identities = 44/57 (77%), Positives = 53/57 (92%) Frame = +1
Query: 1 GIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 171 GIFKSG+P++RARAIV AVTH++DP+I+ DVS GLGEAMVGINLND KVER+AARS+ Sbjct: 261 GIFKSGDPARRARAIVQAVTHYSDPTILTDVSAGLGEAMVGINLNDPKVERYAARSE 317
>tr|A7NYE9|A7NYE9_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024095001 PE=4 SV=1 Length = 197
Score = 94.0 bits (232), Expect = 3e-18 Identities = 42/57 (73%), Positives = 53/57 (92%) Frame = +1
Query: 1 GIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 171 G+FKSG+P++RARAIV AVTH++DP ++A+VSCGLGEAMVGINLND KVER+A RS+ Sbjct: 141 GVFKSGDPARRARAIVQAVTHYSDPDVLAEVSCGLGEAMVGINLNDDKVERYANRSE 197
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 93.2 bits (230), Expect = 6e-18 Identities = 43/57 (75%), Positives = 52/57 (91%) Frame = +1
Query: 1 GIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 171 G+FKSG+P++RARAIV AVTH++DP I+A+VSCGLGEAMVGINL D KVERFA RS+ Sbjct: 255 GVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGEAMVGINLTDDKVERFANRSE 311
>tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 318
Score = 92.4 bits (228), Expect = 1e-17 Identities = 44/57 (77%), Positives = 53/57 (92%) Frame = +1
Query: 1 GIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 171 GIFKSG+P++RARAIV AVTH++DP I+A+VS GLGEAMVGINL+D KVERFAARS+ Sbjct: 262 GIFKSGDPARRARAIVQAVTHYSDPKILAEVSSGLGEAMVGINLSDPKVERFAARSE 318
>tr|A3BFP4|A3BFP4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021866 PE=4 SV=1 Length = 298
Score = 92.4 bits (228), Expect = 1e-17 Identities = 44/57 (77%), Positives = 53/57 (92%) Frame = +1
Query: 1 GIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 171 GIFKSG+P++RARAIV AVTH++DP I+A+VS GLGEAMVGINL+D KVERFAARS+ Sbjct: 242 GIFKSGDPARRARAIVQAVTHYSDPKILAEVSSGLGEAMVGINLSDPKVERFAARSE 298
>tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus japonicus PE=2 SV=1 Length = 310
Score = 92.0 bits (227), Expect = 1e-17 Identities = 40/57 (70%), Positives = 52/57 (91%) Frame = +1
Query: 1 GIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 171 G+FKSG+P++RARAIV AVTH++DP ++A++SCGLGEAMVG+NLND VERFA RS+ Sbjct: 254 GVFKSGDPAKRARAIVQAVTHYSDPGLLAEISCGLGEAMVGLNLNDSNVERFANRSE 310
>tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medicago truncatula PE=2 SV=1 Length = 314
Score = 90.5 bits (223), Expect = 4e-17 Identities = 41/57 (71%), Positives = 51/57 (89%) Frame = +1
Query: 1 GIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARSD 171 G+FKSG+P++RARAIV AVTH++DP I+A+VSCGLGEAMVG+NL D VERFA RS+ Sbjct: 258 GVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGEAMVGLNLTDHNVERFANRSE 314
>tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Triticum aestivum PE=2 SV=1 Length = 314
Score = 89.7 bits (221), Expect = 6e-17 Identities = 43/56 (76%), Positives = 51/56 (91%) Frame = +1
Query: 1 GIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLNDKKVERFAARS 168 GIFKSG+P++RARAIV AVTH++DP I+A+VS GLGEAMVGINL+D VERFAARS Sbjct: 258 GIFKSGDPARRARAIVQAVTHYSDPEILANVSAGLGEAMVGINLSDPNVERFAARS 313
|