DK950371 |
Clone id |
TST38A01NGRL0008_H17 |
Library |
TST38 |
Length |
696 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_H17. 5' end sequence. |
Accession |
DK950371 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
TGCGCAATCAAGGGTGGTGCAGAAGGTCCTAATGGTTGGCGAAATAGTGAGCTACCTTGG ATACTGCCCCGGAAAGGCTTTACTTTGGATATCAGCAATCTCAAGGATGTTATTGACAGC ACATTTAGTGAAAATCCTAATCTTGTCCCAGCTACGCTTGGTGTAGCAGCTGCCGCCGGT GTTAGTTTTGTTGTATTTTCTGAGGCAGAGACAGCATTGCAACTTTTAGGCTCTGCTGCT CTCATCCAACTATTTGTCAAGAAATTCCTCTTTGCCAAGGATCGCGAAAAGACTTTCCAA GAGCTTCAAACATTCTTGGATACAAAGATTGCACCAAAAGAGCTAGTTGATGAGCTAAAG GGAATAAGTGGAACTTTGCTGCCGAAATATGATGAAGTTGCTTCTGGAGGTCCTACAAAT GGAGCTACAGCATCTACTGAAAGCAGCTCGATGATTGAAGTTCAAGCTGAGGTGGCTGCA ACTGCTGAGCAGGCAGAGTCAAAGGAAGAGGAGACAAAGGCAGTCGAATTATCTAAAGAG ACTGTACCTGAAGAACCTAAAGCTTCTGCAGCCTCTACCGATCTCCCGAGGTCCTCGACT CCGCTATCACCGTATACGCAGTTTCCAGAGCTGAAGCCACCATCTTCGCCCACCGCATAC AGGTCTTGACAGATTCAACATAACCTTTTTTCCTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M158 |
Definition |
sp|Q9M158|Y4105_ARATH Uncharacterized protein At4g01050 OS=Arabidopsis thaliana |
Align length |
234 |
Score (bit) |
145.0 |
E-value |
2.0e-34 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LLQ8 |
Definition |
tr|B8LLQ8|B8LLQ8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
220 |
Score (bit) |
167.0 |
E-value |
8.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950371|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_H17, 5' (696 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LLQ8|B8LLQ8_PICSI Putative uncharacterized protein OS=Picea... 167 8e-40 tr|B7FNA7|B7FNA7_MEDTR Putative uncharacterized protein (Fragmen... 149 2e-34 tr|Q0WWP1|Q0WWP1_ARATH Putative uncharacterized protein At4g0105... 145 2e-33 tr|A7PZU0|A7PZU0_VITVI Chromosome chr15 scaffold_40, whole genom... 145 2e-33 tr|A9SUK7|A9SUK7_PHYPA Predicted protein OS=Physcomitrella paten... 142 3e-32 tr|B4FBY4|B4FBY4_MAIZE Putative uncharacterized protein OS=Zea m... 134 7e-30 tr|A2X345|A2X345_ORYSI Putative uncharacterized protein OS=Oryza... 133 1e-29 tr|Q6ETQ7|Q6ETQ7_ORYSJ Os02g0257300 protein OS=Oryza sativa subs... 131 4e-29 tr|A9SMG0|A9SMG0_PHYPA Predicted protein (Fragment) OS=Physcomit... 45 0.004 tr|Q10A77|Q10A77_ORYSJ Os10g0100300 protein OS=Oryza sativa subs... 42 0.049 tr|Q8SKU2|Q8SKU2_PEA Tic62 protein OS=Pisum sativum GN=tic62 PE=... 40 0.19 tr|Q5N838|Q5N838_ORYSJ Rhodanese domain-containing protein-like ... 39 0.32 tr|Q0JH17|Q0JH17_ORYSJ cDNA clone:001-037-E07, full insert seque... 39 0.32 tr|A8JHX4|A8JHX4_CHLRE Predicted protein OS=Chlamydomonas reinha... 39 0.42 tr|A8IXN4|A8IXN4_BRACM Catalytic/coenzyme binding protein OS=Bra... 37 0.93 tr|B1WX34|B1WX34_CYAA5 Cobaltochelatase OS=Cyanothece (strain AT... 37 1.2 tr|Q7SY68|Q7SY68_XENLA Rds35 protein OS=Xenopus laevis GN=rds35 ... 37 1.6 tr|B0P482|B0P482_9CLOT Putative uncharacterized protein OS=Clost... 36 2.1 tr|Q640Y1|Q640Y1_XENLA Putative uncharacterized protein OS=Xenop... 36 2.7 tr|B7ZRS7|B7ZRS7_XENLA Putative uncharacterized protein OS=Xenop... 36 2.7 tr|A0DI43|A0DI43_PARTE Chromosome undetermined scaffold_51, whol... 36 2.7 tr|Q1E8C8|Q1E8C8_COCIM Predicted protein OS=Coccidioides immitis... 36 2.7 tr|Q9LHN0|Q9LHN0_ARATH Gb|AAC26697.1 OS=Arabidopsis thaliana PE=... 35 3.5 tr|Q8H0U5|Q8H0U5_ARATH Putative uncharacterized protein At3g1889... 35 3.5 tr|A7P957|A7P957_VITVI Chromosome chr3 scaffold_8, whole genome ... 35 4.6 tr|A5AHG0|A5AHG0_VITVI Putative uncharacterized protein OS=Vitis... 35 4.6 tr|B4NI35|B4NI35_DROWI GK12979 OS=Drosophila willistoni GN=GK129... 35 4.6 tr|A9NW13|A9NW13_PICSI Putative uncharacterized protein OS=Picea... 34 7.9 tr|A7R162|A7R162_VITVI Chromosome undetermined scaffold_339, who... 34 7.9 tr|A7S9G8|A7S9G8_NEMVE Predicted protein OS=Nematostella vectens... 34 7.9
>tr|B8LLQ8|B8LLQ8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 463
Score = 167 bits (422), Expect = 8e-40 Identities = 91/220 (41%), Positives = 123/220 (55%) Frame = +1
Query: 4 AIKGGAEGPNGWRNSELPWILPRKGFTLDISNLKDVIDSTFSENPNLVPATLXXXXXXXX 183 AIK GAEG GW+N+ LPW++P+ FT+D NLK+ +DS ++ +VP T+ Sbjct: 248 AIKDGAEGARGWQNTGLPWLIPKSLFTVDFGNLKEALDSALEDSSGIVPVTVGVAAATGF 307
Query: 184 XXXXXXEAETALQLLGSAALIQLFVKKFLFAKDREKTFQELQTFLDTKIAPKELVDELKG 363 E ET LQLLGSAAL+Q+FVK+ LFA+DR++T Q++Q FLDTK+APKELVDELK Sbjct: 308 GLAAFSEIETVLQLLGSAALLQVFVKRLLFAEDRKRTLQQIQDFLDTKVAPKELVDELKE 367
Query: 364 ISGTLLPKYDEVASGGPTNGATASTESSSMIXXXXXXXXXXXXXXSKEEETKAVELSKET 543 I LLPK +VA+ + S+ + V + ET Sbjct: 368 IGKALLPKTADVATNNGAVVPRTQQANDSVTPDPAPVSVSSGAEIGDNSTPQPVPVKSET 427
Query: 544 VPEEPKASAASTDLPRSSTPLSPYTQFPELKPPSSPTAYR 663 + + ST PRS LSPY +P+ KPP+SP R Sbjct: 428 IVS--NVAVTSTPSPRS---LSPYPHYPDFKPPTSPCPSR 462
>tr|B7FNA7|B7FNA7_MEDTR Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1 Length = 480
Score = 149 bits (376), Expect = 2e-34 Identities = 94/246 (38%), Positives = 122/246 (49%), Gaps = 29/246 (11%) Frame = +1
Query: 4 AIKGGAEGPNGWRNSELPWILPRKGFTLDISNLKDVIDSTFSENPNLVPATLXXXXXXXX 183 AIK GAEGP GW+NS LPW+ P+K +LD +L D I+ E+ L TL Sbjct: 235 AIKDGAEGPQGWQNSGLPWVEPKKALSLDFGSLTDTINDAIGESDGLA-VTLGIAAATGL 293
Query: 184 XXXXXXEAETALQLLGSAALIQLFVKKFLFAKDREKTFQELQTFLDTKIAPKELVDELKG 363 E ET LQL+GSAA++Q KK LFA+DR+KT +++ FL+TK+APKELVDE+K Sbjct: 294 GVLAFSEVETILQLVGSAAIVQFASKKLLFAEDRKKTLKQVNEFLNTKVAPKELVDEIKD 353
Query: 364 ISGTLLP-------------KYDEVASGG-------------PTNGATASTESSSMIXXX 465 I LLP E+A+ G P A+ E++ I Sbjct: 354 IGKALLPTSTNDKALPAPTENIPELATAGGTVLKAEATPEIVPETKVEAAAEATPEIVPE 413
Query: 466 XXXXXXXXXXXSKEEETKAVELSKETVPE---EPKASAASTDLPRSSTPLSPYTQFPELK 636 ETK VE S E PE PK + +P PLSPY +P+ K Sbjct: 414 TKVEAAAEATPEIVSETK-VEASAEPAPEINSVPKTETEAESIPVQPKPLSPYPYYPDFK 472
Query: 637 PPSSPT 654 PPSSP+ Sbjct: 473 PPSSPS 478
>tr|Q0WWP1|Q0WWP1_ARATH Putative uncharacterized protein At4g01050 OS=Arabidopsis thaliana GN=At4g01050 PE=2 SV=1 Length = 466
Score = 145 bits (367), Expect = 2e-33 Identities = 93/234 (39%), Positives = 118/234 (50%), Gaps = 18/234 (7%) Frame = +1
Query: 4 AIKGGAEGPNGWRNSELPWILPRKGFTLDISNLKDVIDSTFSENPNLVPATLXXXXXXXX 183 AIK GAEGP GW NS LPWI P+K +LD+S+L D I F E+ + V L Sbjct: 230 AIKDGAEGPRGWLNSSLPWIEPKKTLSLDLSSLTDSISGVFGESSDGVSVALGVAAAAGL 289
Query: 184 XXXXXXEAETALQLLGSAALIQLFVKKFLFAKDREKTFQELQTFLDTKIAPKELVDELKG 363 E ET LQLLGSAAL+QL KK LFA+DR++T +++ FL+TK+APKELVDELK Sbjct: 290 SVFAFTEIETILQLLGSAALVQLAGKKLLFAEDRKQTLKQVDEFLNTKVAPKELVDELKE 349
Query: 364 ISGTLLPKYDEVASGGPTNGATASTESSSMIXXXXXXXXXXXXXXSKEEETKAVEL---S 534 I LLP+ ++ AT + E+ S + T V+ Sbjct: 350 IGKALLPQ--STSNKALPAPATVTAEAESATATTTTVDKPVPEPETVAATTTTVDKPVPE 407
Query: 535 KETVPEEPKASAASTDLPRS---------------STPLSPYTQFPELKPPSSP 651 E VPE A + S PLSPY +P+LKPPSSP Sbjct: 408 PEPVPEPVPVPAIEAAVAAQVITEPTETEAKPKPHSRPLSPYASYPDLKPPSSP 461
>tr|A7PZU0|A7PZU0_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027006001 PE=4 SV=1 Length = 440
Score = 145 bits (366), Expect = 2e-33 Identities = 84/217 (38%), Positives = 108/217 (49%) Frame = +1
Query: 4 AIKGGAEGPNGWRNSELPWILPRKGFTLDISNLKDVIDSTFSENPNLVPATLXXXXXXXX 183 AIK GAEGP GW NS LPWILP+K +LD+ N + I E + + T+ Sbjct: 240 AIKDGAEGPRGWMNSSLPWILPKKTLSLDLGNFAESISDALGEGIDGLSLTVGLAAATGL 299
Query: 184 XXXXXXEAETALQLLGSAALIQLFVKKFLFAKDREKTFQELQTFLDTKIAPKELVDELKG 363 E ET LQLLGSAA++Q KKFLFA+DR++T Q++ FL TKIAPK+ VDE+K Sbjct: 300 GLLAFSEVETLLQLLGSAAIVQFVGKKFLFAEDRKETLQQVDEFLTTKIAPKDFVDEIKD 359
Query: 364 ISGTLLPKYDEVASGGPTNGATASTESSSMIXXXXXXXXXXXXXXSKEEETKAVELSKET 543 I LLP A G +T E K + Sbjct: 360 IGKALLP---SPAYGNSLPAPAVATPE-----------------PPTSTEPKVEAAAPPE 399
Query: 544 VPEEPKASAASTDLPRSSTPLSPYTQFPELKPPSSPT 654 + PK + +P S PLSPY +P+ KPP+SPT Sbjct: 400 INSVPKPEVQAESIPSLSRPLSPYPYYPDFKPPTSPT 436
>tr|A9SUK7|A9SUK7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_215892 PE=4 SV=1 Length = 567
Score = 142 bits (357), Expect = 3e-32 Identities = 84/201 (41%), Positives = 108/201 (53%), Gaps = 3/201 (1%) Frame = +1
Query: 4 AIKGGAEGPNGWRNSELPWILPRKGFTLDISNLKDVIDSTFSENP---NLVPATLXXXXX 174 AIKGGAEGPNGW ELPW++P K F DI NLK+++ + + +L+P TL Sbjct: 248 AIKGGAEGPNGWNEKELPWLMPAKAFKFDIGNLKNLVGTGEGVDVGAGDLLPKTLGIAAA 307
Query: 175 XXXXXXXXXEAETALQLLGSAALIQLFVKKFLFAKDREKTFQELQTFLDTKIAPKELVDE 354 EAET LQLLG+ A +QLF K FLFA+DR+KT QEL+TFLDTKIAPK+LVD+ Sbjct: 308 AGVGFVVLSEAETTLQLLGTVAALQLFAKNFLFAEDRKKTIQELKTFLDTKIAPKDLVDD 367
Query: 355 LKGISGTLLPKYDEVASGGPTNGATASTESSSMIXXXXXXXXXXXXXXSKEEETKAVELS 534 +K I LLP EV + T E +E E + VEL Sbjct: 368 VKEIGRVLLPDEGEVKAAVATGEQVLEKELGVDSVTPESLAKKAQEKLEEEVEKRGVEL- 426
Query: 535 KETVPEEPKASAASTDLPRSS 597 P A ++D+ S+ Sbjct: 427 -------PDLGAVTSDIQASA 440
>tr|B4FBY4|B4FBY4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 476
Score = 134 bits (336), Expect = 7e-30 Identities = 79/218 (36%), Positives = 110/218 (50%), Gaps = 1/218 (0%) Frame = +1
Query: 4 AIKGGAEGPNGWRNSELPWILPRKGFTLDISNLKDVIDSTFSENPNLVPATLXXXXXXXX 183 A+K GAEG GW++S LPW P KGF+ D+ L F + + +P T+ Sbjct: 221 AVKDGAEGSRGWKSSNLPWKAPPKGFSFDLGEL-------FGDGSDGLPVTIGLAAATGL 273
Query: 184 XXXXXXEAETALQLLGSAALIQLFVKKFLFAKDREKTFQELQTFLDTKIAPKELVDELKG 363 E ET LQ LGSAA++QL V K L+A+DR+KT +++ F + K+APKEL+DE+K Sbjct: 274 GVLAYTEIETLLQFLGSAAVVQLVVTKLLYAEDRQKTLKQIDEFFNKKVAPKELIDEIKE 333
Query: 364 ISGTLLPKYDEVASGGPTNGATASTESSSMIXXXXXXXXXXXXXXSKEEETKAVELSKET 543 I LLP + S AT V ++ Sbjct: 334 IGQALLPLPGDAKSQPALATAT------------------------------QVAATQTA 363
Query: 544 VPEEPKASAASTDL-PRSSTPLSPYTQFPELKPPSSPT 654 P E + A+T+ P + TPLSPYT +P+LKPPS+PT Sbjct: 364 APAEDATAEATTESDPATPTPLSPYTNYPDLKPPSTPT 401
>tr|A2X345|A2X345_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06628 PE=4 SV=1 Length = 476
Score = 133 bits (334), Expect = 1e-29 Identities = 78/217 (35%), Positives = 109/217 (50%) Frame = +1
Query: 4 AIKGGAEGPNGWRNSELPWILPRKGFTLDISNLKDVIDSTFSENPNLVPATLXXXXXXXX 183 A+K GAEG GW +S LPW P+KGF+L D+I + + +P TL Sbjct: 226 AVKDGAEGRRGWLSSSLPWTAPKKGFSLS-----DLI----GDGTDGLPVTLGLAAATGL 276
Query: 184 XXXXXXEAETALQLLGSAALIQLFVKKFLFAKDREKTFQELQTFLDTKIAPKELVDELKG 363 E ET LQ LGSAA++QL K ++A+DR++T +++ F + K+APKELVDE+K Sbjct: 277 GILAYTEIETVLQFLGSAAIVQLVASKLIYAEDRKRTLKQIDDFFNKKVAPKELVDEIKE 336
Query: 364 ISGTLLPKYDEVASGGPTNGATASTESSSMIXXXXXXXXXXXXXXSKEEETKAVELSKET 543 IS LLP + T A A+ E++ A + Sbjct: 337 ISQALLPSTGTKSQPAITEAAPATAEAA-----------------------PAAATATAA 373
Query: 544 VPEEPKASAASTDLPRSSTPLSPYTQFPELKPPSSPT 654 P P ++ P TPLSPYT +P+LKPPSSP+ Sbjct: 374 PPAAPVEETSTEAAPAEPTPLSPYTNYPDLKPPSSPS 410
>tr|Q6ETQ7|Q6ETQ7_ORYSJ Os02g0257300 protein OS=Oryza sativa subsp. japonica GN=P0613F08.22 PE=4 SV=1 Length = 478
Score = 131 bits (330), Expect = 4e-29 Identities = 77/217 (35%), Positives = 108/217 (49%) Frame = +1
Query: 4 AIKGGAEGPNGWRNSELPWILPRKGFTLDISNLKDVIDSTFSENPNLVPATLXXXXXXXX 183 A+K GAEG GW +S LPW P+KGF+L D+I + + +P TL Sbjct: 228 AVKDGAEGRRGWLSSSLPWTAPKKGFSLS-----DLI----GDGTDGLPVTLGLAAATGL 278
Query: 184 XXXXXXEAETALQLLGSAALIQLFVKKFLFAKDREKTFQELQTFLDTKIAPKELVDELKG 363 E ET LQ LGSAA++QL K ++A+DR++T +++ F + K+APKELVDE+K Sbjct: 279 GILAYTEIETVLQFLGSAAIVQLVASKLIYAEDRKRTLKQIDDFFNKKVAPKELVDEIKE 338
Query: 364 ISGTLLPKYDEVASGGPTNGATASTESSSMIXXXXXXXXXXXXXXSKEEETKAVELSKET 543 I LLP + T A A+ E++ A + Sbjct: 339 IGQALLPSTGTKSQPAITEAAPATAEAA-----------------------PAAATATAA 375
Query: 544 VPEEPKASAASTDLPRSSTPLSPYTQFPELKPPSSPT 654 P P ++ P TPLSPYT +P+LKPPSSP+ Sbjct: 376 PPAAPVEETSTEAAPAEPTPLSPYTNYPDLKPPSSPS 412
>tr|A9SMG0|A9SMG0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_19350 PE=4 SV=1 Length = 120
Score = 45.1 bits (105), Expect = 0.004 Identities = 18/24 (75%), Positives = 20/24 (83%) Frame = +1
Query: 4 AIKGGAEGPNGWRNSELPWILPRK 75 +IKGG EGP GW +SELPW LPRK Sbjct: 97 SIKGGVEGPKGWLSSELPWQLPRK 120
>tr|Q10A77|Q10A77_ORYSJ Os10g0100300 protein OS=Oryza sativa subsp. japonica GN=Os10g0100300 PE=2 SV=1 Length = 497
Score = 41.6 bits (96), Expect = 0.049 Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 15/60 (25%) Frame = +1
Query: 520 AVELSKETVPEEPKASAAST---------------DLPRSSTPLSPYTQFPELKPPSSPT 654 A S P+ P A+AAS+ L + +PLSPYT++ ELKPPSSPT Sbjct: 432 ASSASVSASPDTPPAAAASSAALDSSANGTPITGDQLNQQQSPLSPYTRYEELKPPSSPT 491
Score = 39.7 bits (91), Expect = 0.19 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 4/45 (8%) Frame = +1
Query: 532 SKETVPEEPKASAASTDLPR----SSTPLSPYTQFPELKPPSSPT 654 SK P EP+ P+ S PLSPYT F +LKPPSSP+ Sbjct: 319 SKRQPPPEPEVVQQGETPPKPIQQSQRPLSPYTAFVDLKPPSSPS 363
Score = 39.3 bits (90), Expect = 0.24 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = +1
Query: 532 SKETVPEEPKASAASTDLPRSST-PLSPYTQFPELKPPSSPT 654 S T+ + S D P+ PLSPYT++ ELKPPSSP+ Sbjct: 384 SSSTLNSSATGTPISVDQPKQQQRPLSPYTRYEELKPPSSPS 425
|