DK950374 |
Clone id |
TST38A01NGRL0008_H20 |
Library |
TST38 |
Length |
644 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_H20. 5' end sequence. |
Accession |
DK950374 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL457Contig1 |
Sequence |
CGTAATAAGTCTGTGACTGTGTGTGTTCGTGTGTGTGTGTTTCCATAGCCGGAGCGCCCT TATACACGCACGCGCGCACACACAGACACTCACACAGAAGAAATCATGGCGCCCAAGAAG GTTCTCGACCCCGACACCATCAATGAGAACATCAAGAAGCTGGTATATGCCGTACGTGGG GAGCTCTATATCCGCGCTTCTGAGCTGCAGAAAGAAGGCAAAAAGATTATCTTTACCAAT GTTGGCAACCCTCATGCACTCGGGCAGAAACCGTTGACATTTCCTCGCCAGGTGATGGCT CTTTGTCAGGCACCTTTTTTGATGGAAGATCTCAATGTGGACCTGTTATTCCCTGCTGAT GTTATTGCTAGAGCAAAGCTTTATTTGTCTTACACATCTGGTGGACTTGGTGCGTATAGT GATTCTCGTGGATTACCTGGCATTAGGCAGGAAGTTGCCAATTTTCTTCTCCAGCGTGAT GGGTATCCAAGTGATCCCGAACTGATTTTCCTCACTGATGGAGCTAGTAAAGGTGTCATG CAACTTCTCAACATGATTGTTCGGAACAAGAATGATGGGGTGTTGTGTCCTATACCACAA TATCCTCTCTACTCTGCTACAATTGAGCTGGTTGGTGGAACTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54MJ7 |
Definition |
sp|Q54MJ7|ALAM_DICDI Probable alanine aminotransferase, mitochondrial OS=Dictyostelium discoideum |
Align length |
194 |
Score (bit) |
173.0 |
E-value |
6.0e-43 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950374|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_H20, 5' (644 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q54MJ7|ALAM_DICDI Probable alanine aminotransferase, mitochon... 173 6e-43 sp|P34106|ALA2_PANMI Alanine aminotransferase 2 OS=Panicum milia... 167 3e-41 sp|P52894|ALA2_HORVU Alanine aminotransferase 2 OS=Hordeum vulga... 164 3e-40 sp|Q10334|ALAT_SCHPO Putative alanine aminotransferase OS=Schizo... 150 4e-36 sp|Q6NYL5|ALAT2_DANRE Alanine aminotransferase 2-like OS=Danio r... 146 8e-35 sp|P52893|ALAM_YEAST Probable alanine aminotransferase, mitochon... 143 7e-34 sp|P52892|ALAT_YEAST Probable alanine aminotransferase OS=Saccha... 141 3e-33 sp|Q8BGT5|ALAT2_MOUSE Alanine aminotransferase 2 OS=Mus musculus... 137 4e-32 sp|Q28DB5|ALAT2_XENTR Alanine aminotransferase 2 OS=Xenopus trop... 133 7e-31 sp|Q6GM82|ALAT2_XENLA Alanine aminotransferase 2 OS=Xenopus laev... 133 9e-31 sp|P24298|ALAT1_HUMAN Alanine aminotransferase 1 OS=Homo sapiens... 131 3e-30 sp|Q8TD30|ALAT2_HUMAN Alanine aminotransferase 2 OS=Homo sapiens... 129 1e-29 sp|P25409|ALAT1_RAT Alanine aminotransferase 1 OS=Rattus norvegi... 129 1e-29 sp|Q8QZR5|ALAT1_MOUSE Alanine aminotransferase 1 OS=Mus musculus... 129 1e-29 sp|A4IFH5|ALAT1_BOVIN Alanine aminotransferase 1 OS=Bos taurus G... 129 1e-29 sp|P63498|AAT_MYCTU Probable aspartate aminotransferase OS=Mycob... 65 4e-10 sp|P63499|AAT_MYCBO Probable aspartate aminotransferase OS=Mycob... 65 4e-10 sp|P71348|Y286_HAEIN Uncharacterized aminotransferase HI0286 OS=... 59 2e-08 sp|P0A961|YFBQ_SHIFL Uncharacterized aminotransferase yfbQ OS=Sh... 57 1e-07 sp|P0A959|YFBQ_ECOLI Uncharacterized aminotransferase yfbQ OS=Es... 57 1e-07 sp|P0A960|YFBQ_ECOL6 Uncharacterized aminotransferase yfbQ OS=Es... 57 1e-07 sp|O87320|AATC_RHIME Putative aminotransferase aatC OS=Rhizobium... 47 7e-05 sp|Q58097|AAT2_METJA Probable aspartate aminotransferase 2 OS=Me... 47 8e-05 sp|Q55128|AAT_SYNY3 Aspartate aminotransferase OS=Synechocystis ... 44 7e-04 sp|Q9STR4|1A17_ARATH 1-aminocyclopropane-1-carboxylate synthase ... 43 0.001 sp|O67781|AAT_AQUAE Aspartate aminotransferase OS=Aquifex aeolic... 43 0.002 sp|Q60317|AAT1_METJA Probable aspartate aminotransferase 1 OS=Me... 43 0.002 sp|B1I544|DAPAT_DESAP LL-diaminopimelate aminotransferase OS=Des... 41 0.005 sp|P23034|AAT_BACY2 Aspartate aminotransferase OS=Bacillus sp. (... 41 0.005 sp|Q9SAR0|1A16_ARATH 1-aminocyclopropane-1-carboxylate synthase ... 41 0.005
>sp|Q54MJ7|ALAM_DICDI Probable alanine aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=gpt PE=3 SV=1 Length = 534
Score = 173 bits (439), Expect = 6e-43 Identities = 94/194 (48%), Positives = 134/194 (69%), Gaps = 13/194 (6%) Frame = +1
Query: 100 EIMAPKKVLDPDTINENIKKLVYAVRGELYIRAS----ELQK---EGKK------IIFTN 240 E M KK + D I +N++ YAVRGEL IRA +LQK EG K I++ N Sbjct: 46 EKMTHKKSMTIDNICQNVRNAQYAVRGELVIRAEAISHQLQKQKTEGTKTLPFEEIVYCN 105
Query: 241 VGNPHALGQKPLTFPRQVMALCQAPFLMEDLNVDLLFPADVIARAKLYLSYTSGGLGAYS 420 +GNP L QKPLT+ RQV++L + P L+++ V+ ++PADVI+RAK L + GAYS Sbjct: 106 IGNPQQLKQKPLTYFRQVVSLVECPDLLDNPYVEKIYPADVISRAKEILGSINNTTGAYS 165
Query: 421 DSRGLPGIRQEVANFLLQRDGYPSDPELIFLTDGASKGVMQLLNMIVRNKNDGVLCPIPQ 600 +S+G+ + + VA+F+ +RDG+ SDP IFLTDGAS GV ++L +++++++DG+L PIPQ Sbjct: 166 NSQGIGLVLRSVADFIERRDGHKSDPSEIFLTDGASVGVQRILKLLIKDRSDGILIPIPQ 225
Query: 601 YPLYSATIELVGGT 642 YPLYSATIEL G+ Sbjct: 226 YPLYSATIELYNGS 239
>sp|P34106|ALA2_PANMI Alanine aminotransferase 2 OS=Panicum miliaceum PE=1 SV=1 Length = 482
Score = 167 bits (424), Expect = 3e-41 Identities = 85/180 (47%), Positives = 121/180 (67%), Gaps = 10/180 (5%) Frame = +1
Query: 133 DTINENIKKLVYAVRGELYIRASELQKEGK---------KIIFTNVGNPHALGQKPLTFP 285 + +N + K YAVRGE+ I A LQ++ + +I++ N+GNP +LGQ+P+TF Sbjct: 8 ENLNPKVLKCEYAVRGEIVIHAQHLQQQLQTQPGSLPFDEILYCNIGNPQSLGQQPVTFF 67
Query: 286 RQVMALCQAPFLMEDLNVDLLFPADVIARAKLYLSYTSG-GLGAYSDSRGLPGIRQEVAN 462 R+V+ALC P L+E LF AD I+RAK LS G GAYS S+G+ G+R +A Sbjct: 68 REVLALCDHPCLLEKEETKSLFSADAISRAKQILSTIPGRATGAYSHSQGIKGLRDAIAA 127
Query: 463 FLLQRDGYPSDPELIFLTDGASKGVMQLLNMIVRNKNDGVLCPIPQYPLYSATIELVGGT 642 + RDG+P++ + IF+TDGAS GV ++ +++RN+ DG+LCPIPQYPLYSA+I L GGT Sbjct: 128 GIASRDGFPANADDIFVTDGASPGVHMMMQLLIRNEKDGILCPIPQYPLYSASIALHGGT 187
>sp|P52894|ALA2_HORVU Alanine aminotransferase 2 OS=Hordeum vulgare PE=2 SV=1 Length = 482
Score = 164 bits (416), Expect = 3e-40 Identities = 84/179 (46%), Positives = 121/179 (67%), Gaps = 10/179 (5%) Frame = +1
Query: 133 DTINENIKKLVYAVRGELYIRASELQKEGK---------KIIFTNVGNPHALGQKPLTFP 285 D +N + K YAVRGE+ I A LQ++ K +I++ N+GNP +LGQ+P+TF Sbjct: 8 DNLNPKVLKCEYAVRGEIVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFF 67
Query: 286 RQVMALCQAPFLMEDLNVDLLFPADVIARAKLYLSYTSG-GLGAYSDSRGLPGIRQEVAN 462 R+V+ALC P L++ + LF AD I+RAK L+ G GAYS S+G+ G+R +A+ Sbjct: 68 REVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIKGLRDAIAS 127
Query: 463 FLLQRDGYPSDPELIFLTDGASKGVMQLLNMIVRNKNDGVLCPIPQYPLYSATIELVGG 639 + RDG+P++ + IFLTDGAS GV ++ +++RN+ DG+L PIPQYPLYSA+I L GG Sbjct: 128 GIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGG 186
>sp|Q10334|ALAT_SCHPO Putative alanine aminotransferase OS=Schizosaccharomyces pombe GN=SPBC582.08 PE=2 SV=1 Length = 505
Score = 150 bits (380), Expect = 4e-36 Identities = 79/184 (42%), Positives = 116/184 (63%), Gaps = 12/184 (6%) Frame = +1
Query: 127 DPDTINENIKKLVYAVRGELYIRASELQKE---------GKKIIFTNVGNPHALGQKPLT 279 D +++N+ + K YAVRG L I A E+Q + +I++ N+GNP +GQ P+T Sbjct: 29 DLNSLNQQVFKANYAVRGALAILADEIQDDLLENPSSYPFSEIVYANIGNPQQMGQSPIT 88
Query: 280 FPRQVMALCQAPFLM---EDLNVDLLFPADVIARAKLYLSYTSGGLGAYSDSRGLPGIRQ 450 F RQV++LCQ P L+ E+ LFP DV+ R+K+ L SG LGAYS S+G+P +R+ Sbjct: 89 FVRQVLSLCQYPTLLDHAEEKWFQNLFPTDVVQRSKMLLK-ESGSLGAYSASQGIPLVRR 147
Query: 451 EVANFLLQRDGYPSDPELIFLTDGASKGVMQLLNMIVRNKNDGVLCPIPQYPLYSATIEL 630 VA+F+ RDG+ +P I+LT GAS ++ +I+ DGV+ P PQYPLY A I+L Sbjct: 148 HVADFIRARDGFDCEPSDIYLTSGASHAARLIMTLIIARPTDGVMVPAPQYPLYGAQIDL 207
Query: 631 VGGT 642 + G+ Sbjct: 208 MSGS 211
>sp|Q6NYL5|ALAT2_DANRE Alanine aminotransferase 2-like OS=Danio rerio GN=gpt2l PE=2 SV=2 Length = 549
Score = 146 bits (369), Expect = 8e-35 Identities = 88/216 (40%), Positives = 130/216 (60%), Gaps = 20/216 (9%) Frame = +1
Query: 49 PERPYTRTRAHTDTHTEEIMAPK-------KVLDPDTINENIKKLVYAVRGELYIRASEL 207 P R ++ A H ++ M+ KVL DT+N N+KK+ YAVRG + RA ++ Sbjct: 42 PHRDFSAFPAAQSEHMQQKMSENGAIPRQGKVLTVDTMNANVKKVDYAVRGPIVQRAVQI 101
Query: 208 QKEGKK--------IIFTNVGNPHALGQKPLTFPRQVMALCQAPFLMEDLNVDLLFPADV 363 +KE K+ +I N+G+ HA+GQ+P+TF RQVMALC P L++D FP D Sbjct: 102 EKELKEGVKKPFDEVIKANIGDAHAMGQRPITFFRQVMALCTYPQLLDDNK----FPEDA 157
Query: 364 IARAKLYLSYTSG-GLGAYSDSRGLPGIRQEVANFLLQRD-GYPSDPELIFLTDGASKGV 537 RA+ L G +GAY+ S+G+ +RQ+VA ++ +RD G PSDP+ I+LT GAS G+ Sbjct: 158 KNRARRILQSCGGNSIGAYTTSQGIDCVRQDVAKYIERRDGGIPSDPDNIYLTTGASDGI 217
Query: 538 MQLLNMIVRNK---NDGVLCPIPQYPLYSATIELVG 636 + +L ++ + GV+ IPQYPLYSA+I +G Sbjct: 218 VTILKLLTAGEGLTRTGVMISIPQYPLYSASIAELG 253
>sp|P52893|ALAM_YEAST Probable alanine aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=ALT1 PE=1 SV=1 Length = 592
Score = 143 bits (361), Expect = 7e-34 Identities = 91/206 (44%), Positives = 117/206 (56%), Gaps = 14/206 (6%) Frame = +1
Query: 55 RPYTRTRAHTDTHTEEIMAPKKVLDPDTINENIKKLVYAVRGELYIRASELQKEGKK--- 225 R R HT + P + L + +NEN+ K YAVRG + +RA EL+ + +K Sbjct: 88 RHLNRFPHHTLKTSNNEFYPAEQLTLEDVNENVLKAKYAVRGAIPMRAEELKAQLEKDPQ 147
Query: 226 ------IIFTNVGNPHALGQKPLTFPRQVMALCQAPFLMEDLNVDL----LFPADVIARA 375 II N+GNP L QKPLT+ RQV++L Q P L+ L LF D I RA Sbjct: 148 SLPFDRIINANIGNPQQLQQKPLTYYRQVLSLLQYPELLNQNEQQLVDSKLFKLDAIKRA 207
Query: 376 KLYLSYTSGGLGAYSDSRGLPGIRQEVANFLLQRD-GYPSDPELIFLTDGASKGVMQLLN 552 K + G +GAYS S+G+ GIR+ VA F+ +RD G S PE IFLT GAS V LL+ Sbjct: 208 KSLMEDIGGSVGAYSSSQGVEGIRKSVAEFITKRDEGEISYPEDIFLTAGASAAVNYLLS 267
Query: 553 MIVRNKNDGVLCPIPQYPLYSATIEL 630 + R GVL PIPQYPLY+AT+ L Sbjct: 268 IFCRGPETGVLIPIPQYPLYTATLAL 293
>sp|P52892|ALAT_YEAST Probable alanine aminotransferase OS=Saccharomyces cerevisiae GN=ALT2 PE=1 SV=1 Length = 507
Score = 141 bits (355), Expect = 3e-33 Identities = 80/178 (44%), Positives = 112/178 (62%), Gaps = 14/178 (7%) Frame = +1
Query: 139 INENIKKLVYAVRGELYIRASELQKEGKK---------IIFTNVGNPHALGQKPLTFPRQ 291 +N + K YAVRG + RA EL++E KK II N+GNP L QKPLTF RQ Sbjct: 31 LNTGVTKAEYAVRGAIPTRADELKEELKKNPEVLPFDDIINANIGNPQQLDQKPLTFTRQ 90
Query: 292 VMALCQAPFLMEDLNVDL----LFPADVIARAKLYLSYTSGGLGAYSDSRGLPGIRQEVA 459 V+A+ + P ++ + +L LF D + RA+ L+ G +GAYS S+G+PGIRQ VA Sbjct: 91 VLAILEYPEILRVGHNELASLNLFSRDALERAERLLNDIGGSIGAYSHSQGVPGIRQTVA 150
Query: 460 NFLLQRDG-YPSDPELIFLTDGASKGVMQLLNMIVRNKNDGVLCPIPQYPLYSATIEL 630 +F+ +RDG P+ PE I+LT GAS LL+++ ++ G+L PIPQYPLY+A+ L Sbjct: 151 DFITRRDGGEPATPEDIYLTTGASSAATSLLSLLCKDSQTGLLIPIPQYPLYTASASL 208
>sp|Q8BGT5|ALAT2_MOUSE Alanine aminotransferase 2 OS=Mus musculus GN=Gpt2 PE=2 SV=1 Length = 522
Score = 137 bits (346), Expect = 4e-32 Identities = 76/181 (41%), Positives = 114/181 (62%), Gaps = 12/181 (6%) Frame = +1
Query: 118 KVLDPDTINENIKKLVYAVRGELYIRASELQKEGKK--------IIFTNVGNPHALGQKP 273 ++L +++N +K + YAVRG + ++A E++ E ++ +I N+G+ HA+GQ+P Sbjct: 46 RILTLESMNPQVKAVEYAVRGPIVLKAGEIEMELQRGIKKPFTEVIRANIGDAHAMGQQP 105
Query: 274 LTFPRQVMALCQAPFLMEDLNVDLLFPADVIARAKLYLSYTSGG-LGAYSDSRGLPGIRQ 450 +TF RQVMALC P L+ + FP D RA+ L G LG+YS S+G+ IR+ Sbjct: 106 ITFLRQVMALCTYPNLLNSPS----FPEDAKKRARRILQACGGNSLGSYSASQGVNCIRE 161
Query: 451 EVANFLLQRDGYPSDPELIFLTDGASKGVMQLLNMIVR---NKNDGVLCPIPQYPLYSAT 621 +VA F+ +RDG P+DP+ I+LT GAS G+ +L ++V GV+ PIPQYPLYSA Sbjct: 162 DVAAFITRRDGVPADPDNIYLTTGASDGISTILKLLVSGGGKSRTGVMIPIPQYPLYSAV 221
Query: 622 I 624 I Sbjct: 222 I 222
>sp|Q28DB5|ALAT2_XENTR Alanine aminotransferase 2 OS=Xenopus tropicalis GN=gpt2 PE=2 SV=1 Length = 524
Score = 133 bits (335), Expect = 7e-31 Identities = 83/182 (45%), Positives = 114/182 (62%), Gaps = 13/182 (7%) Frame = +1
Query: 118 KVLDPDTINENIKKLVYAVRGELYIRASELQKE---GKKIIFT-----NVGNPHALGQKP 273 ++L +++N I+K+ YAVRG + IRA EL+KE G K FT N+G+ HA+GQKP Sbjct: 47 RILTLESMNPCIQKVEYAVRGPIVIRAVELEKELQQGVKKPFTEVIKANIGDAHAMGQKP 106
Query: 274 LTFPRQVMALCQAPFLMEDLNVDLLFPADVIARAKLYLSYTSG-GLGAYSDSRGLPGIRQ 450 +TF RQV A+C P LM D FP DV +A L G +GAYS S+G+ IRQ Sbjct: 107 ITFLRQVSAICLYPELMNDNK----FPEDVKQKAARILQACGGHSIGAYSASQGIEVIRQ 162
Query: 451 EVANFLLQRD-GYPSDPELIFLTDGASKGVMQLLNMIVRNK---NDGVLCPIPQYPLYSA 618 +VA ++ +RD G SDP I+L+ GAS ++ +L ++V + GVL PIPQYPLYSA Sbjct: 163 DVAKYIERRDGGIQSDPNNIYLSTGASDSIVTMLKLLVSGQGKSRTGVLIPIPQYPLYSA 222
Query: 619 TI 624 + Sbjct: 223 AL 224
>sp|Q6GM82|ALAT2_XENLA Alanine aminotransferase 2 OS=Xenopus laevis GN=gpt2 PE=2 SV=1 Length = 540
Score = 133 bits (334), Expect = 9e-31 Identities = 83/182 (45%), Positives = 114/182 (62%), Gaps = 13/182 (7%) Frame = +1
Query: 118 KVLDPDTINENIKKLVYAVRGELYIRASELQKE---GKKIIFT-----NVGNPHALGQKP 273 ++L D++N I+K+ YAVRG + IRA EL+KE G K FT N+G+ HA+GQKP Sbjct: 63 RILTLDSMNPCIQKVEYAVRGPIVIRAVELEKELQQGVKKPFTEVIKANIGDAHAMGQKP 122
Query: 274 LTFPRQVMALCQAPFLMEDLNVDLLFPADVIARAKLYLSYTSG-GLGAYSDSRGLPGIRQ 450 +TF RQV A+C P LM D FP DV +A L G +GAYS S+G+ IRQ Sbjct: 123 VTFLRQVSAICLYPELMNDNK----FPEDVKQKAARILQACGGHSIGAYSASQGIEVIRQ 178
Query: 451 EVANFLLQRD-GYPSDPELIFLTDGASKGVMQLLNMIVRNK---NDGVLCPIPQYPLYSA 618 +VA ++ +RD G SDP I+L+ GAS ++ +L ++V + GV+ PIPQYPLYSA Sbjct: 179 DVAKYIERRDGGILSDPNNIYLSTGASDSIVTMLKLLVSGQGKSRTGVMIPIPQYPLYSA 238
Query: 619 TI 624 + Sbjct: 239 AL 240
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TEP5 |
Definition |
tr|A9TEP5|A9TEP5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
179 |
Score (bit) |
304.0 |
E-value |
3.0e-81 |
Report |
|