DK950381 |
Clone id |
TST38A01NGRL0008_I03 |
Library |
TST38 |
Length |
632 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_I03. 5' end sequence. |
Accession |
DK950381 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL959Contig1 |
Sequence |
CAAAAAAGTTATGTAGTGCAAACAGATAGGGAGCACAGGGGATATGGAGGCGATGAAGGT GCTAATCAGGAATGCGACTGTGCGGATGCCGTGCGCCCGATCTGTAGTGCATTGCTTGAG CAGAAAAAGGAAGATCTCCGCCGCAAACTGGTGTTGCAGACACATCAAGTATAGGACACG CTGCTGCTCTGCTTCCTTTCCTCTGGCTCAGAAAACAGAGGAGGCGCCCATAAATCTAGA CGAAGGTAAGGGCGGCGCTGCTTCCATTGTTGGTAGTCTCTCACAATACCTTCTCAAGGG TTGCACACCTGGGCATGAAGCCCCTTCTTGCCCTGACTATGTTGGCCCTGTTGAGGTTGC TCGCACCTTCTATGGCCGCGGCCGTGGCCTCTTTGCAACACAAGATGTGCACGCAGGTAC CCTTCTCCTCATCAGCAACCCCATGGCCATCTCCTACGATGATCCCCACCGCATCAGGCT GCTCTCCAAACTGGTCACAATGGCAGCAAAAGACCCTCTTTTCCTCAGGAAAATGCACTC TTTGGCTCACACCCAGAGCTCTCAACATCGGTTAGAGGTGCCCTCCATGGATTTTCTCAC TTCAGATTCTTCAGATTACATGTATAGTGAGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q2LK54 |
Definition |
sp|Q2LK54|COL12_CHICK Collectin-12 OS=Gallus gallus |
Align length |
25 |
Score (bit) |
33.1 |
E-value |
1.2 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U604 |
Definition |
tr|A9U604|A9U604_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
85 |
Score (bit) |
65.1 |
E-value |
3.0e-09 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950381|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_I03, 5' (632 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9U604|A9U604_PHYPA Predicted protein OS=Physcomitrella paten... 65 3e-09 tr|A9TID7|A9TID7_PHYPA Predicted protein OS=Physcomitrella paten... 63 1e-08 tr|B4F9T1|B4F9T1_MAIZE Putative uncharacterized protein OS=Zea m... 51 5e-05 tr|A8JCM2|A8JCM2_CHLRE Histone methyltransferase OS=Chlamydomona... 48 4e-04 tr|Q8S7V1|Q8S7V1_ORYSJ Os03g0168700 protein OS=Oryza sativa subs... 47 0.001 tr|A3AEJ0|A3AEJ0_ORYSJ Putative uncharacterized protein OS=Oryza... 47 0.001 tr|A2XCZ3|A2XCZ3_ORYSI Putative uncharacterized protein OS=Oryza... 47 0.001 tr|A9SV99|A9SV99_PHYPA Predicted protein OS=Physcomitrella paten... 46 0.002 tr|A8I6N2|A8I6N2_CHLRE Histone methyltransferase OS=Chlamydomona... 44 0.008 tr|A5BCK6|A5BCK6_VITVI Putative uncharacterized protein OS=Vitis... 42 0.023 tr|B7FQW4|B7FQW4_PHATR Predicted protein OS=Phaeodactylum tricor... 41 0.052 tr|A8I6N8|A8I6N8_CHLRE Predicted protein (Fragment) OS=Chlamydom... 41 0.052 tr|A7QUQ3|A7QUQ3_VITVI Chromosome chr10 scaffold_179, whole geno... 41 0.052 tr|A8I6N5|A8I6N5_CHLRE Predicted protein (Fragment) OS=Chlamydom... 41 0.068 tr|Q9LQX6|Q9LQX6_ARATH T24P13.14 OS=Arabidopsis thaliana PE=4 SV=1 39 0.20 tr|B2B113|B2B113_PODAN Predicted CDS Pa_3_8000 OS=Podospora anse... 39 0.20 tr|A8JBK7|A8JBK7_CHLRE Predicted protein OS=Chlamydomonas reinha... 39 0.26 tr|Q4WVN2|Q4WVN2_ASPFU TPR domain protein OS=Aspergillus fumigat... 39 0.26 tr|B0Y1P8|B0Y1P8_ASPFC TPR domain protein OS=Aspergillus fumigat... 39 0.26 tr|Q4PBR6|Q4PBR6_USTMA Putative uncharacterized protein OS=Ustil... 39 0.34 tr|Q6F2D2|Q6F2D2_SOLDE Putative TPR domain containing protein, i... 38 0.58 tr|Q60D23|Q60D23_SOLDE TPR domain containing protein, putative O... 38 0.58 tr|Q5NRN1|Q5NRN1_SOLDE TPR domain containing protein, putative O... 38 0.58 tr|A8PRY1|A8PRY1_MALGO Putative uncharacterized protein OS=Malas... 38 0.58 tr|A2QAM0|A2QAM0_ASPNC Similarity to phosphoprotein phosphatase ... 38 0.58 tr|A4S4E3|A4S4E3_OSTLU Predicted protein OS=Ostreococcus lucimar... 37 0.99 tr|Q00Z98|Q00Z98_OSTTA FOG: TPR repeat (ISS) OS=Ostreococcus tau... 37 1.3 tr|Q5AY01|Q5AY01_EMENI Putative uncharacterized protein OS=Emeri... 37 1.3 tr|Q0D4Q2|Q0D4Q2_ORYSJ Os07g0613600 protein OS=Oryza sativa subs... 36 2.2 tr|A8J8S0|A8J8S0_CHLRE Predicted protein OS=Chlamydomonas reinha... 36 2.2
>tr|A9U604|A9U604_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_173749 PE=4 SV=1 Length = 1117
Score = 65.1 bits (157), Expect = 3e-09 Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 1/85 (1%) Frame = +2
Query: 278 LSQYLLKGCTPGHEAPSCPDYVGPVEVARTFYGRGRGLFATQDVHAGTLLLISNPMA-IS 454 LS Y LKG G E+P C DY+GPV + GRGRGL T+DV AG LLL+SNP+A + Sbjct: 719 LSHYYLKGKQAG-ESPFCADYIGPVIITDVGRGRGRGLVLTKDVEAGELLLVSNPIANLQ 777
Query: 455 YDDPHRIRLLSKLVTMAAKDPLFLR 529 H R +S+ + FL+ Sbjct: 778 LQVDHTRREISEAIVNGRVQEGFLK 802
>tr|A9TID7|A9TID7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170248 PE=4 SV=1 Length = 1301
Score = 63.2 bits (152), Expect = 1e-08 Identities = 32/57 (56%), Positives = 39/57 (68%) Frame = +2
Query: 278 LSQYLLKGCTPGHEAPSCPDYVGPVEVARTFYGRGRGLFATQDVHAGTLLLISNPMA 448 L+ Y LKG G E+P C DY+GPV + GRGRGL T+DV AG LLL+SNP+A Sbjct: 795 LAHYYLKGRQAG-ESPFCADYIGPVIITDVGRGRGRGLVLTKDVEAGELLLVSNPIA 850
>tr|B4F9T1|B4F9T1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 544
Score = 51.2 bits (121), Expect = 5e-05 Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 11/129 (8%) Frame = +2
Query: 278 LSQYLLKGCTPGHEAPSCPDYVGPVEVARTFYGRGRGLFATQDVHAGTLLLISNPMAI-- 451 LS+++L G + + P +YVG VEV R+ +G GRG+FA ++V AGT L+I+ +AI Sbjct: 149 LSEWVLAGFSG--KFPDLAEYVGCVEVRRSPHG-GRGVFAVKNVEAGTTLIIAKAVAIGR 205
Query: 452 ------SYDDPHRI---RLLSKLVTMAAKDPLFLRKMHSLAHTQSSQHRLEVPSMDFLTS 604 S D + K++ A K P +++L+ Q Q L VP M Sbjct: 206 GVIPDASGSDEKMFVWKDFVGKVLEAAEKCPKTAALIYTLSTGQERQDELAVPDMAMFRK 265
Query: 605 DSSDYMYSE 631 ++ D S+ Sbjct: 266 ETEDDSLSD 274
>tr|A8JCM2|A8JCM2_CHLRE Histone methyltransferase OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_178280 PE=4 SV=1 Length = 711
Score = 48.1 bits (113), Expect = 4e-04 Identities = 32/91 (35%), Positives = 46/91 (50%) Frame = +2
Query: 248 KGGAASIVGSLSQYLLKGCTPGHEAPSCPDYVGPVEVARTFYGRGRGLFATQDVHAGTLL 427 +G A S V + +Q A VGPV +A GRGRGL A++ V G LL Sbjct: 125 RGSAPSAVAAAAQAAADALFTDPGAGPLAPQVGPVAIADLGDGRGRGLVASRTVQPGELL 184
Query: 428 LISNPMAISYDDPHRIRLLSKLVTMAAKDPL 520 L P+A+++DD L+ L + A+DP+ Sbjct: 185 LAVRPLALAWDDG-----LAALGSSLAQDPV 210
>tr|Q8S7V1|Q8S7V1_ORYSJ Os03g0168700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0091P11.26 PE=4 SV=1 Length = 536
Score = 46.6 bits (109), Expect = 0.001 Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 11/124 (8%) Frame = +2
Query: 278 LSQYLLKGCTPGHEAPSCPDYVGPVEVARTFYGRGRGLFATQDVHAGTLLLISNPMAI-- 451 LS+++L G + + P ++VG VEV R+ +G GRG+FA +++ AG L+IS +AI Sbjct: 144 LSEWVLAGFSG--KCPDLAEHVGAVEVRRSAHG-GRGVFAVKNIEAGANLVISKAVAIGR 200
Query: 452 -----SYDDPHRI----RLLSKLVTMAAKDPLFLRKMHSLAHTQSSQHRLEVPSMDFLTS 604 + D ++ L+ K++ A K P +++L+ + + L +P M Sbjct: 201 GVIPDAADSGEKMVVWKDLVDKVLDAAEKCPRTASLIYTLSTGEEPEDELPIPDMAHFKQ 260
Query: 605 DSSD 616 ++ + Sbjct: 261 ETEE 264
>tr|A3AEJ0|A3AEJ0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009212 PE=4 SV=1 Length = 509
Score = 46.6 bits (109), Expect = 0.001 Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 11/124 (8%) Frame = +2
Query: 278 LSQYLLKGCTPGHEAPSCPDYVGPVEVARTFYGRGRGLFATQDVHAGTLLLISNPMAI-- 451 LS+++L G + + P ++VG VEV R+ +G GRG+FA +++ AG L+IS +AI Sbjct: 117 LSEWVLAGFSG--KCPDLAEHVGAVEVRRSAHG-GRGVFAVKNIEAGANLVISKAVAIGR 173
Query: 452 -----SYDDPHRI----RLLSKLVTMAAKDPLFLRKMHSLAHTQSSQHRLEVPSMDFLTS 604 + D ++ L+ K++ A K P +++L+ + + L +P M Sbjct: 174 GVIPDAADSGEKMVVWKDLVDKVLDAAEKCPRTASLIYTLSTGEEPEDELPIPDMAHFKQ 233
Query: 605 DSSD 616 ++ + Sbjct: 234 ETEE 237
>tr|A2XCZ3|A2XCZ3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10178 PE=4 SV=1 Length = 536
Score = 46.6 bits (109), Expect = 0.001 Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 11/124 (8%) Frame = +2
Query: 278 LSQYLLKGCTPGHEAPSCPDYVGPVEVARTFYGRGRGLFATQDVHAGTLLLISNPMAI-- 451 LS+++L G + + P ++VG VEV R+ +G GRG+FA +++ AG L+IS +AI Sbjct: 144 LSEWVLAGFSG--KCPDLAEHVGAVEVRRSAHG-GRGVFAVKNIEAGANLVISKAVAIGR 200
Query: 452 -----SYDDPHRI----RLLSKLVTMAAKDPLFLRKMHSLAHTQSSQHRLEVPSMDFLTS 604 + D ++ L+ K++ A K P +++L+ + + L +P M Sbjct: 201 GVIPDAADSGEKMVVWKDLVDKVLDAAEKCPRTASLIYTLSTGEEPEDELPIPDMAHFKQ 260
Query: 605 DSSD 616 ++ + Sbjct: 261 ETEE 264
>tr|A9SV99|A9SV99_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_84447 PE=4 SV=1 Length = 691
Score = 45.8 bits (107), Expect = 0.002 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Frame = +2
Query: 275 SLSQYLLKGCTPGHEAPSC-PDYVGPVEVARTFYGRGRGLFATQDVHAGTLLLISNPMAI 451 SL +Y L G G P D++G V++ R GRGRGL + +V AG +LLI NP+AI Sbjct: 242 SLEEYCLSG---GRMLPPLVEDFIGSVKINRVGDGRGRGLVLSSNVAAGDVLLICNPIAI 298
Query: 452 S 454 + Sbjct: 299 A 299
>tr|A8I6N2|A8I6N2_CHLRE Histone methyltransferase OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_142738 PE=4 SV=1 Length = 953
Score = 43.9 bits (102), Expect = 0.008 Identities = 21/41 (51%), Positives = 26/41 (63%) Frame = +2
Query: 335 DYVGPVEVARTFYGRGRGLFATQDVHAGTLLLISNPMAISY 457 D++GPV+VA GRGRGL+ T V AG LLL A+ Y Sbjct: 431 DFIGPVQVADAGEGRGRGLYTTAPVRAGQLLLAMRADAVCY 471
>tr|A5BCK6|A5BCK6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025097 PE=4 SV=1 Length = 588
Score = 42.4 bits (98), Expect = 0.023 Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 17/115 (14%) Frame = +2
Query: 323 PSCPDYVGPVEVARTFYGRGRGLFATQDVHAGTLLLISNPMAI--------SYDDPHRIR 478 P +Y+G V++ ++ GRGLFAT++V AGTL+L++ +A + D I+ Sbjct: 227 PELAEYIGAVQIMKSEIS-GRGLFATKNVDAGTLVLVTKAIATERCILPEQNDDSADNIQ 285
Query: 479 L------LSKLVTMAAKDPLFLRKMHSLAHTQSS---QHRLEVPSMDFLTSDSSD 616 L + K+V A+K +++H L SS + LEVP ++ ++ + Sbjct: 286 LVMWKNFIDKVVESASK----CKRLHHLISVLSSGEXEDVLEVPDVNLFRPETEE 336
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