DK950384 |
Clone id |
TST38A01NGRL0008_I06 |
Library |
TST38 |
Length |
598 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_I06. 5' end sequence. |
Accession |
DK950384 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
CTCGGTTACAACTAGCTATGGCGGGTGCGGAGGGTTTCGCATGCGCGTGCCTCTTATGCC AAGATGGACTTTGTACTTACCGGGGATGGGTACGACATAAGTTCGACTTGAAATGAAGTA TGTGAAACCTTTGATGAACTGGAGTCTCCCTGGAGATCTTCGTGAGGGGCATTTATGCTT ATGGCTTTTGAGAAGCCTTGACCCATTCAACGCAGAGGATTTGTTCCCTTCGCCAAGGGG CTGGATGTCGTTCATCTCGCTCAGTCCTGCACGGGCAAGACCGCCGCATTTTGCTACGGA ATACTCCAACAACTAAATTACAATCTATTTGACTGTCCTGCGCTTGTCCTAGCCCCCACT CGCGAGTTGGTCCAGCAGATACAGAAGGTCATGAGATCCCTTGGTGACTATTTGCAGGTG AAAGTGCATGCATGTGTAGGTGGTACCAGCGTAAGAAAGAATATCCGTGTCCTCCAAAGT GCACTTCATGTGGTGGTTGGAACCCCTGGCCGTGTGGATGACATGCTTCGACGTGGGTCT CTTCGCTCGGACTACATCATAATGTTTGTTTTGAATGAGGCTGATAAGATGCTATCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q40471 |
Definition |
sp|Q40471|IF4A9_TOBAC Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum |
Align length |
185 |
Score (bit) |
213.0 |
E-value |
6.0e-55 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SY53 |
Definition |
tr|A9SY53|A9SY53_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
185 |
Score (bit) |
223.0 |
E-value |
5.0e-57 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950384|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_I06, 5' (598 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SY53|A9SY53_PHYPA Predicted protein OS=Physcomitrella paten... 223 5e-57 tr|A9RVE1|A9RVE1_PHYPA Predicted protein OS=Physcomitrella paten... 222 1e-56 tr|A9TZ99|A9TZ99_PHYPA Predicted protein OS=Physcomitrella paten... 221 2e-56 tr|A9U6C4|A9U6C4_PHYPA Predicted protein (Fragment) OS=Physcomit... 221 3e-56 tr|A9SGN5|A9SGN5_PHYPA Predicted protein OS=Physcomitrella paten... 221 3e-56 tr|B8LRR8|B8LRR8_PICSI Putative uncharacterized protein OS=Picea... 220 4e-56 tr|A9PA53|A9PA53_POPTR Putative uncharacterized protein OS=Popul... 218 2e-55 tr|A9PD17|A9PD17_POPTR Putative uncharacterized protein OS=Popul... 218 2e-55 tr|A9PA36|A9PA36_POPTR Putative uncharacterized protein OS=Popul... 217 5e-55 tr|A9P851|A9P851_POPTR Putative uncharacterized protein OS=Popul... 217 5e-55 tr|A7P6N2|A7P6N2_VITVI Chromosome chr9 scaffold_7, whole genome ... 217 5e-55 tr|A7PE49|A7PE49_VITVI Chromosome chr11 scaffold_13, whole genom... 215 1e-54 tr|A7P4J8|A7P4J8_VITVI Chromosome chr4 scaffold_6, whole genome ... 215 1e-54 tr|A5BI23|A5BI23_VITVI Putative uncharacterized protein OS=Vitis... 215 1e-54 tr|Q6T8C6|Q6T8C6_HELAN Initiation factor eIF4A-15 OS=Helianthus ... 215 2e-54 tr|Q8H1A4|Q8H1A4_PEA DEAD box RNA helicase OS=Pisum sativum PE=2... 214 3e-54 tr|A5BNE8|A5BNE8_VITVI Putative uncharacterized protein OS=Vitis... 214 3e-54 tr|A2Q689|A2Q689_MEDTR Helicase, C-terminal OS=Medicago truncatu... 212 1e-53 tr|Q8H1A5|Q8H1A5_PEA DEAD box RNA helicase OS=Pisum sativum PE=2... 211 2e-53 tr|B7FJJ2|B7FJJ2_MEDTR Putative uncharacterized protein OS=Medic... 209 1e-52 tr|B4FBK3|B4FBK3_MAIZE Eukaryotic initiation factor 4A OS=Zea ma... 208 2e-52 tr|B1P765|B1P765_LOLTE Eukaryotic initiation factor 4A (Fragment... 208 2e-52 tr|Q4U474|Q4U474_PENAM Eukaryotic initiation factor 4A OS=Pennis... 207 3e-52 tr|B7EMF9|B7EMF9_ORYSJ cDNA clone:J033048E24, full insert sequen... 206 6e-52 tr|A3A343|A3A343_ORYSJ Putative uncharacterized protein OS=Oryza... 206 6e-52 tr|A2X0V4|A2X0V4_ORYSI Putative uncharacterized protein OS=Oryza... 206 6e-52 tr|O24449|O24449_MAIZE Translational initiation factor eIF-4A OS... 206 8e-52 tr|O24558|O24558_MAIZE Translation initiation factor OS=Zea mays... 206 1e-51 tr|B7EPR0|B7EPR0_ORYSJ cDNA clone:001-114-H08, full insert seque... 205 1e-51 tr|A2YGP5|A2YGP5_ORYSI Putative uncharacterized protein OS=Oryza... 205 1e-51
>tr|A9SY53|A9SY53_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_107162 PE=3 SV=1 Length = 413
Score = 223 bits (569), Expect = 5e-57 Identities = 121/185 (65%), Positives = 141/185 (76%) Frame = +1
Query: 43 ARASYAKMDFVLTGDGYDISST*NEVCETFDELESPWRSS*GAFMLMAFEKP*PIQRRGF 222 AR AKM+ VL G+G D ST EV ETFD ++ G + FEKP IQ+RG Sbjct: 13 ARQYDAKMETVLAGEGEDFISTWEEVHETFDVMDLHENLLRGIYAY-GFEKPSAIQQRGI 71
Query: 223 VPFAKGLDVVHLAQSCTGKTAAFCYGILQQLNYNLFDCPALVLAPTRELVQQIQKVMRSL 402 VPF KGLDV+ AQS TGKTA FC GILQQL+Y L +C ALVLAPTREL QQI+KVMR+L Sbjct: 72 VPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTRELAQQIEKVMRAL 131
Query: 403 GDYLQVKVHACVGGTSVRKNIRVLQSALHVVVGTPGRVDDMLRRGSLRSDYIIMFVLNEA 582 GDYLQVKVHACVGGTSVR++ R+LQ+ +HVVVGTPGRV DMLRR +LR+D I FVL+EA Sbjct: 132 GDYLQVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRADAIKCFVLDEA 191
Query: 583 DKMLS 597 D+MLS Sbjct: 192 DEMLS 196
>tr|A9RVE1|A9RVE1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_119989 PE=3 SV=1 Length = 414
Score = 222 bits (565), Expect = 1e-56 Identities = 118/185 (63%), Positives = 141/185 (76%) Frame = +1
Query: 43 ARASYAKMDFVLTGDGYDISST*NEVCETFDELESPWRSS*GAFMLMAFEKP*PIQRRGF 222 AR AKM+ +L+ +G D ST EV +TFD + G + +FEKP IQ+RG Sbjct: 13 ARQYDAKMENILSAEGEDFISTWEEVHDTFDVMGLHENLLRGIYAYGSFEKPSAIQQRGI 72
Query: 223 VPFAKGLDVVHLAQSCTGKTAAFCYGILQQLNYNLFDCPALVLAPTRELVQQIQKVMRSL 402 VPF KGLDV+ AQS TGKTA FC GILQQL+Y L +C ALVLAPTREL QQI+KVMR+L Sbjct: 73 VPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTRELAQQIEKVMRAL 132
Query: 403 GDYLQVKVHACVGGTSVRKNIRVLQSALHVVVGTPGRVDDMLRRGSLRSDYIIMFVLNEA 582 GDYLQVKVHACVGGTSVR++ R+LQ+ +HVVVGTPGRV DMLRR +LR+D I FVL+EA Sbjct: 133 GDYLQVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRADSIKCFVLDEA 192
Query: 583 DKMLS 597 D+MLS Sbjct: 193 DEMLS 197
>tr|A9TZ99|A9TZ99_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226898 PE=3 SV=1 Length = 413
Score = 221 bits (563), Expect = 2e-56 Identities = 120/185 (64%), Positives = 141/185 (76%) Frame = +1
Query: 43 ARASYAKMDFVLTGDGYDISST*NEVCETFDELESPWRSS*GAFMLMAFEKP*PIQRRGF 222 AR AKM+ +L+G+G D ST EV ETFD + G + FEKP IQ+RG Sbjct: 13 ARQYDAKMENILSGEGDDFISTWEEVHETFDVMGLHENLLRGIYAY-GFEKPSAIQQRGI 71
Query: 223 VPFAKGLDVVHLAQSCTGKTAAFCYGILQQLNYNLFDCPALVLAPTRELVQQIQKVMRSL 402 VPF KGLDV+ AQS TGKTA FC GILQQL+Y L +C ALVLAPTREL QQI+KVMR+L Sbjct: 72 VPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTRELAQQIEKVMRAL 131
Query: 403 GDYLQVKVHACVGGTSVRKNIRVLQSALHVVVGTPGRVDDMLRRGSLRSDYIIMFVLNEA 582 GDYLQVKVHACVGGTSVR++ R+LQ+ +HVVVGTPGRV DMLRR +LR+D I FVL+EA Sbjct: 132 GDYLQVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRADSIKCFVLDEA 191
Query: 583 DKMLS 597 D+MLS Sbjct: 192 DEMLS 196
>tr|A9U6C4|A9U6C4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228441 PE=4 SV=1 Length = 203
Score = 221 bits (562), Expect = 3e-56 Identities = 120/185 (64%), Positives = 140/185 (75%) Frame = +1
Query: 43 ARASYAKMDFVLTGDGYDISST*NEVCETFDELESPWRSS*GAFMLMAFEKP*PIQRRGF 222 AR AKM+ +L G+G D ST EV ETFD + G + FEKP IQ+RG Sbjct: 13 ARQYDAKMETILGGEGEDFISTWEEVHETFDVMGLHENLLRGIYAY-GFEKPSAIQQRGI 71
Query: 223 VPFAKGLDVVHLAQSCTGKTAAFCYGILQQLNYNLFDCPALVLAPTRELVQQIQKVMRSL 402 VPF KGLDV+ AQS TGKTA FC GILQQL+Y L +C ALVLAPTREL QQI+KVMR+L Sbjct: 72 VPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTRELAQQIEKVMRAL 131
Query: 403 GDYLQVKVHACVGGTSVRKNIRVLQSALHVVVGTPGRVDDMLRRGSLRSDYIIMFVLNEA 582 GDYLQVKVHACVGGTSVR++ R+LQ+ +HVVVGTPGRV DMLRR +LR+D I FVL+EA Sbjct: 132 GDYLQVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRADSIKCFVLDEA 191
Query: 583 DKMLS 597 D+MLS Sbjct: 192 DEMLS 196
>tr|A9SGN5|A9SGN5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_233331 PE=3 SV=1 Length = 413
Score = 221 bits (562), Expect = 3e-56 Identities = 120/185 (64%), Positives = 140/185 (75%) Frame = +1
Query: 43 ARASYAKMDFVLTGDGYDISST*NEVCETFDELESPWRSS*GAFMLMAFEKP*PIQRRGF 222 AR AKM+ +L G+G D ST EV ETFD + G + FEKP IQ+RG Sbjct: 13 ARQYDAKMETILGGEGEDFISTWEEVHETFDVMGLHENLLRGIYAY-GFEKPSAIQQRGI 71
Query: 223 VPFAKGLDVVHLAQSCTGKTAAFCYGILQQLNYNLFDCPALVLAPTRELVQQIQKVMRSL 402 VPF KGLDV+ AQS TGKTA FC GILQQL+Y L +C ALVLAPTREL QQI+KVMR+L Sbjct: 72 VPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYQLLECQALVLAPTRELAQQIEKVMRAL 131
Query: 403 GDYLQVKVHACVGGTSVRKNIRVLQSALHVVVGTPGRVDDMLRRGSLRSDYIIMFVLNEA 582 GDYLQVKVHACVGGTSVR++ R+LQ+ +HVVVGTPGRV DMLRR +LR+D I FVL+EA Sbjct: 132 GDYLQVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVYDMLRRNALRADSIKCFVLDEA 191
Query: 583 DKMLS 597 D+MLS Sbjct: 192 DEMLS 196
>tr|B8LRR8|B8LRR8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 413
Score = 220 bits (561), Expect = 4e-56 Identities = 120/185 (64%), Positives = 141/185 (76%) Frame = +1
Query: 43 ARASYAKMDFVLTGDGYDISST*NEVCETFDELESPWRSS*GAFMLMAFEKP*PIQRRGF 222 AR AKM +L+ +G ++ ++ +EV E+FDE+ G + FEKP IQ+RG Sbjct: 13 ARQYDAKMKEILSTEGDELFASYDEVHESFDEMGLHENLLRGIYAY-GFEKPSAIQQRGI 71
Query: 223 VPFAKGLDVVHLAQSCTGKTAAFCYGILQQLNYNLFDCPALVLAPTRELVQQIQKVMRSL 402 VPF KGLDV+ AQS TGKTA FC GILQQL+Y L DC ALVLAPTREL QQI+KVMR+L Sbjct: 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLLDCQALVLAPTRELAQQIEKVMRAL 131
Query: 403 GDYLQVKVHACVGGTSVRKNIRVLQSALHVVVGTPGRVDDMLRRGSLRSDYIIMFVLNEA 582 GDYLQVKVHACVGGTSVR + R+L S +HVVVGTPGRV DMLRR SLR DYI MFVL+EA Sbjct: 132 GDYLQVKVHACVGGTSVRDDQRILMSGVHVVVGTPGRVFDMLRRHSLRPDYIKMFVLDEA 191
Query: 583 DKMLS 597 D+MLS Sbjct: 192 DEMLS 196
>tr|A9PA53|A9PA53_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 413
Score = 218 bits (556), Expect = 2e-55 Identities = 118/180 (65%), Positives = 135/180 (75%) Frame = +1
Query: 58 AKMDFVLTGDGYDISST*NEVCETFDELESPWRSS*GAFMLMAFEKP*PIQRRGFVPFAK 237 AKM+ +L DG D + EV ETFD + G + FEKP IQ+RG VPF K Sbjct: 18 AKMNDLLANDGQDFFTMYEEVFETFDSMGLQENLLRGIYAY-GFEKPSAIQQRGIVPFCK 76
Query: 238 GLDVVHLAQSCTGKTAAFCYGILQQLNYNLFDCPALVLAPTRELVQQIQKVMRSLGDYLQ 417 GLDV+ AQS TGKTA FC GILQQL+Y L C ALVLAPTREL QQI+KVMR+LGDYL Sbjct: 77 GLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLG 136
Query: 418 VKVHACVGGTSVRKNIRVLQSALHVVVGTPGRVDDMLRRGSLRSDYIIMFVLNEADKMLS 597 VKVHACVGGTSVR++ R+LQ+ +HVVVGTPGRV DMLRR SLR DYI MFVL+EAD+MLS Sbjct: 137 VKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRQDYIKMFVLDEADEMLS 196
>tr|A9PD17|A9PD17_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 413
Score = 218 bits (555), Expect = 2e-55 Identities = 117/180 (65%), Positives = 137/180 (76%) Frame = +1
Query: 58 AKMDFVLTGDGYDISST*NEVCETFDELESPWRSS*GAFMLMAFEKP*PIQRRGFVPFAK 237 AKM+ +L DG D ++ +EV +TFD + G + FEKP IQ+RG VPF K Sbjct: 18 AKMNDLLANDGQDFFTSYDEVYDTFDSMGLQENLLRGIYAY-GFEKPSAIQQRGIVPFCK 76
Query: 238 GLDVVHLAQSCTGKTAAFCYGILQQLNYNLFDCPALVLAPTRELVQQIQKVMRSLGDYLQ 417 GLDV+ AQS TGKTA FC GILQQL+Y L C ALVLAPTREL QQI+KVMR+LGDYL Sbjct: 77 GLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLG 136
Query: 418 VKVHACVGGTSVRKNIRVLQSALHVVVGTPGRVDDMLRRGSLRSDYIIMFVLNEADKMLS 597 VKVHACVGGTSVR++ R+LQ+ +HVVVGTPGRV DMLRR SLR DYI MFVL+EAD+MLS Sbjct: 137 VKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLS 196
>tr|A9PA36|A9PA36_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 413
Score = 217 bits (552), Expect = 5e-55 Identities = 116/185 (62%), Positives = 141/185 (76%) Frame = +1
Query: 43 ARASYAKMDFVLTGDGYDISST*NEVCETFDELESPWRSS*GAFMLMAFEKP*PIQRRGF 222 AR ++M+ +LT +G D ++ +EV ETFD + G + FEKP IQ+RG Sbjct: 13 ARQFDSRMNELLTAEGQDFFTSYDEVHETFDAMNLKENLLRGIYAY-GFEKPSAIQQRGI 71
Query: 223 VPFAKGLDVVHLAQSCTGKTAAFCYGILQQLNYNLFDCPALVLAPTRELVQQIQKVMRSL 402 VPF KGLDV+ AQS TGKTA FC GILQQL+Y++ +C ALVLAPTREL QQI+KVMR+L Sbjct: 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYDIVECQALVLAPTRELAQQIEKVMRAL 131
Query: 403 GDYLQVKVHACVGGTSVRKNIRVLQSALHVVVGTPGRVDDMLRRGSLRSDYIIMFVLNEA 582 GDYL VKVHACVGGTSVR++ R+L + +HVVVGTPGRV DMLRR SLR DYI MFVL+EA Sbjct: 132 GDYLGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEA 191
Query: 583 DKMLS 597 D+MLS Sbjct: 192 DEMLS 196
>tr|A9P851|A9P851_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 413
Score = 217 bits (552), Expect = 5e-55 Identities = 117/185 (63%), Positives = 141/185 (76%) Frame = +1
Query: 43 ARASYAKMDFVLTGDGYDISST*NEVCETFDELESPWRSS*GAFMLMAFEKP*PIQRRGF 222 AR +KM+ +LT DG D ++ +EV +TFD + G + FEKP IQ+RG Sbjct: 13 ARQFDSKMNELLTTDGQDFFTSYDEVYDTFDAMGLKENLLRGIYAY-GFEKPSAIQQRGI 71
Query: 223 VPFAKGLDVVHLAQSCTGKTAAFCYGILQQLNYNLFDCPALVLAPTRELVQQIQKVMRSL 402 VPF KGLDV+ AQS TGKTA FC GILQQL+Y++ +C ALVLAPTREL QQI+KVMR+L Sbjct: 72 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYDVVECQALVLAPTRELAQQIEKVMRAL 131
Query: 403 GDYLQVKVHACVGGTSVRKNIRVLQSALHVVVGTPGRVDDMLRRGSLRSDYIIMFVLNEA 582 GDYL VKVHACVGGTSVR++ R+L + +HVVVGTPGRV DMLRR SLR DYI MFVL+EA Sbjct: 132 GDYLGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEA 191
Query: 583 DKMLS 597 D+MLS Sbjct: 192 DEMLS 196
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