DK950391 |
Clone id |
TST38A01NGRL0008_I13 |
Library |
TST38 |
Length |
635 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_I13. 5' end sequence. |
Accession |
DK950391 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL261Contig1 |
Sequence |
CCGAGTTCTGTGCAGTAACGACCGGGCTACTAAGAGAACAGAAAAGCAGGGCACATGCAT GCCTCTGTGTGTGTGCCCTTCTGCGCAGCTTCGGGTAAAGCAAGTGTAGCAGGGTGTGAA TGATGGCAGGTGTTGCTGAAGAGGAGGTTTGCCAGATAGAGTCCTTACAAGTGGAGGAGT ATCCTTTTGGCTCTGGCTGGTTCTTTCCTCGTGAGCAGATTGAGCAGCGATCCTTGTCTA GAAGGGATGGTATAAGCCTAGCGAAGGAGAACCAGCTCCGCAAGTCTTATTGTGTCTTTC TGCAAGACCTTGGCATGCGCCTGAAAGTGCCTCAATTGACAATTGCGACGTCAATCGTGT TTTGCCATCGGTTCTATCTTCGGCAGTCACATGCAAAGAATGACCGCTATACGATTGCAA CAGCTTGCATGTTCCTGGCTGGGAAGGTGGAGGAGACTCCAAAATTACTGCAGAATGTCC TCTCTCTTTCCTATGATATAAGACACAAAAGAGACAAAGTAGCTGCGGAGCGAATTAAAC AGAAGGAGGTCTATGAGCACGAGAAGGAGCAAGTTTTGCTAGCAGAAAATGTAGTCCTTC AAACTTTGGGTTTTGAGCTCAATGTCATCCATCCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q2RAC5 |
Definition |
sp|Q2RAC5|CCT13_ORYSJ Cyclin-T1-3 OS=Oryza sativa subsp. japonica |
Align length |
149 |
Score (bit) |
226.0 |
E-value |
1.0e-58 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8BJ73 |
Definition |
tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
Align length |
149 |
Score (bit) |
226.0 |
E-value |
1.0e-57 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950391|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_I13, 5' (635 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza... 226 1e-57 tr|B7EPW6|B7EPW6_ORYSJ cDNA clone:J013153K21, full insert sequen... 225 2e-57 tr|B7FL84|B7FL84_MEDTR Putative uncharacterized protein OS=Medic... 217 5e-55 tr|A7QCS7|A7QCS7_VITVI Chromosome undetermined scaffold_79, whol... 215 2e-54 tr|A7QD89|A7QD89_VITVI Chromosome undetermined scaffold_80, whol... 215 2e-54 tr|B7FLS8|B7FLS8_MEDTR Putative uncharacterized protein OS=Medic... 213 6e-54 tr|A3CHD6|A3CHD6_ORYSJ Putative uncharacterized protein OS=Oryza... 211 2e-53 tr|A3C8T7|A3C8T7_ORYSJ Putative uncharacterized protein OS=Oryza... 211 3e-53 tr|A9SI06|A9SI06_PHYPA Predicted protein OS=Physcomitrella paten... 204 5e-51 tr|A9TMA9|A9TMA9_PHYPA Predicted protein (Fragment) OS=Physcomit... 202 1e-50 tr|A9SUB1|A9SUB1_PHYPA Predicted protein OS=Physcomitrella paten... 202 2e-50 tr|A9SK15|A9SK15_PHYPA Predicted protein (Fragment) OS=Physcomit... 187 5e-46 tr|A9SUA9|A9SUA9_PHYPA Predicted protein (Fragment) OS=Physcomit... 184 5e-45 tr|B6SH69|B6SH69_MAIZE Cyclin-dependent protein kinase OS=Zea ma... 164 4e-39 tr|A7NT76|A7NT76_VITVI Chromosome chr18 scaffold_1, whole genome... 164 5e-39 tr|B8AH65|B8AH65_ORYSI Putative uncharacterized protein OS=Oryza... 161 4e-38 tr|B7F0D1|B7F0D1_ORYSJ cDNA clone:002-129-H05, full insert seque... 161 4e-38 tr|A3A6C4|A3A6C4_ORYSJ Putative uncharacterized protein OS=Oryza... 152 2e-35 tr|Q6EEW1|Q6EEW1_MEDTR Cyclin T1 OS=Medicago truncatula PE=2 SV=1 142 1e-32 tr|A7NWJ7|A7NWJ7_VITVI Chromosome chr5 scaffold_2, whole genome ... 142 1e-32 tr|A5ASI0|A5ASI0_VITVI Putative uncharacterized protein OS=Vitis... 142 2e-32 tr|B6UF70|B6UF70_MAIZE Putative uncharacterized protein OS=Zea m... 134 4e-30 tr|Q3V0G4|Q3V0G4_MOUSE Cyclin T1 (Fragment) OS=Mus musculus GN=C... 122 2e-26 tr|Q54LJ0|Q54LJ0_DICDI Cyclin OS=Dictyostelium discoideum GN=cyc... 119 1e-25 tr|Q866N0|Q866N0_TUPCH Cyclin T1 OS=Tupaia chinensis PE=2 SV=1 119 2e-25 tr|B8AH26|B8AH26_ORYSI Putative uncharacterized protein OS=Oryza... 118 3e-25 tr|Q8MK43|Q8MK43_CAPHI Cyclin T1 OS=Capra hircus GN=CCNT1 PE=3 SV=1 118 3e-25 tr|Q8MJC2|Q8MJC2_CAPHI Cyclin T1 protein OS=Capra hircus GN=CCNT... 118 3e-25 tr|A5B2H5|A5B2H5_VITVI Putative uncharacterized protein OS=Vitis... 117 6e-25 tr|A9XU13|A9XU13_HUMAN Cyclin T1b OS=Homo sapiens GN=CYCT1b PE=2... 116 1e-24
>tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35185 PE=4 SV=1 Length = 490
Score = 226 bits (575), Expect = 1e-57 Identities = 108/149 (72%), Positives = 128/149 (85%) Frame = +3
Query: 189 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 368 G+ W+F R++IE+ SLSRRDGI L KE+ LRKSYC FLQDLGMRLKVPQ+TIAT+IVFCH Sbjct: 34 GASWYFSRKEIEENSLSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCH 93
Query: 369 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 548 RF+LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I HK+D A +RIKQKE Sbjct: 94 RFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEIIHKKDAAAVQRIKQKE 153
Query: 549 VYEHEKEQVLLAENVVLQTLGFELNVIHP 635 VYE +KE +LL E VVL TLGF+LNV HP Sbjct: 154 VYEQQKELILLGERVVLVTLGFDLNVHHP 182
>tr|B7EPW6|B7EPW6_ORYSJ cDNA clone:J013153K21, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 543
Score = 225 bits (573), Expect = 2e-57 Identities = 108/149 (72%), Positives = 128/149 (85%) Frame = +3
Query: 189 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 368 G+ W+F R++IE+ S SRRDGI L KE+ LRKSYC FLQDLGMRLKVPQ+TIAT+IVFCH Sbjct: 33 GASWYFSRKEIEENSPSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCH 92
Query: 369 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 548 RFYLRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I HK+D A +RIKQKE Sbjct: 93 RFYLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAGQRIKQKE 152
Query: 549 VYEHEKEQVLLAENVVLQTLGFELNVIHP 635 VY+ +KE +LLAE VVL TLGF+LNV HP Sbjct: 153 VYDQQKELILLAERVVLATLGFDLNVHHP 181
>tr|B7FL84|B7FL84_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 265
Score = 217 bits (552), Expect = 5e-55 Identities = 104/149 (69%), Positives = 125/149 (83%) Frame = +3
Query: 189 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 368 GS W+F R++IE+ S S+ DGI L KE LRKSYC FLQDLGMRLKVPQ+TIAT+I+FCH Sbjct: 30 GSRWYFSRKEIEENSPSQEDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCH 89
Query: 369 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 548 RF+LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I +K+D A +RIKQKE Sbjct: 90 RFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIMVSYEIINKKDPTAVQRIKQKE 149
Query: 549 VYEHEKEQVLLAENVVLQTLGFELNVIHP 635 VYE +KE +LLAE VVL TLGF+ NV HP Sbjct: 150 VYEQQKELILLAERVVLATLGFDFNVHHP 178
>tr|A7QCS7|A7QCS7_VITVI Chromosome undetermined scaffold_79, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035533001 PE=3 SV=1 Length = 502
Score = 215 bits (548), Expect = 2e-54 Identities = 107/170 (62%), Positives = 131/170 (77%) Frame = +3
Query: 126 AGVAEEEVCQIESLQVEEYPFGSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQ 305 +G+ E+ C +EE G W+ R++IE+ S SRRDGI L KE RKSYC FLQ Sbjct: 12 SGIFEDGSCCNSKDGLEE---GGHWYMSRKEIEENSPSRRDGIDLRKETYFRKSYCTFLQ 68
Query: 306 DLGMRLKVPQLTIATSIVFCHRFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLS 485 DLGMRLKVPQ+TIAT+I+FCHRF+L QSHAKNDR TIAT CMFLAGKVEETP+ L++V+ Sbjct: 69 DLGMRLKVPQVTIATAIIFCHRFFLCQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIL 128
Query: 486 LSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQTLGFELNVIHP 635 +SY+I HKRD A ++IKQKEVYE +KE +L+ E VVL TLGF+LNV HP Sbjct: 129 VSYEIIHKRDPAAVQKIKQKEVYEQQKELILIGERVVLATLGFDLNVHHP 178
>tr|A7QD89|A7QD89_VITVI Chromosome undetermined scaffold_80, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035737001 PE=3 SV=1 Length = 523
Score = 215 bits (547), Expect = 2e-54 Identities = 103/149 (69%), Positives = 124/149 (83%) Frame = +3
Query: 189 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 368 G W+ R++IE+ S S+RDGI L KE LRKSYC FLQDLGMRLKVPQ+TIAT+I+FCH Sbjct: 30 GGRWYLSRKEIEENSPSKRDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCH 89
Query: 369 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 548 RF+LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I +K+D A +RIKQKE Sbjct: 90 RFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIINKKDPAAVQRIKQKE 149
Query: 549 VYEHEKEQVLLAENVVLQTLGFELNVIHP 635 VYE +KE +LL E VVL TLGF+LNV HP Sbjct: 150 VYEQQKELILLGERVVLATLGFDLNVHHP 178
>tr|B7FLS8|B7FLS8_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 395
Score = 213 bits (543), Expect = 6e-54 Identities = 101/146 (69%), Positives = 123/146 (84%) Frame = +3
Query: 198 WFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCHRFY 377 W+ R++IE+ + SR+DGI L KE LRKSYC FLQDLGMRLKVPQ+TIAT+I+FCHRF+ Sbjct: 34 WYMSRKEIEENAPSRKDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF 93
Query: 378 LRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYE 557 LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY++ HK+D AA+RIKQKEVYE Sbjct: 94 LRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEMIHKKDPAAAQRIKQKEVYE 153
Query: 558 HEKEQVLLAENVVLQTLGFELNVIHP 635 +KE +LL E VVL TL F+LNV HP Sbjct: 154 QQKELILLGERVVLATLAFDLNVQHP 179
>tr|A3CHD6|A3CHD6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034708 PE=3 SV=1 Length = 683
Score = 211 bits (538), Expect = 2e-53 Identities = 108/177 (61%), Positives = 129/177 (72%), Gaps = 28/177 (15%) Frame = +3
Query: 189 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 368 G+ W+F R++IE+ S SRRDGI L KE+ LRKSYC FLQDLGMRLKVPQ+TIAT+IVFCH Sbjct: 33 GASWYFSRKEIEENSPSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCH 92
Query: 369 RFYLRQSHAKNDR----------------------------YTIATACMFLAGKVEETPK 464 RFYLRQSHAKNDR +TIAT CMFLAGKVEETP+ Sbjct: 93 RFYLRQSHAKNDRRCQKLRAITRKRNEYKFLLPMERDSIVVHTIATVCMFLAGKVEETPR 152
Query: 465 LLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLLAENVVLQTLGFELNVIHP 635 L++V+ +SY+I HK+D A +RIKQKEVY+ +KE +LLAE VVL TLGF+LNV HP Sbjct: 153 PLKDVILVSYEIIHKKDPAAGQRIKQKEVYDQQKELILLAERVVLATLGFDLNVHHP 209
>tr|A3C8T7|A3C8T7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_031709 PE=3 SV=1 Length = 495
Score = 211 bits (537), Expect = 3e-53 Identities = 105/154 (68%), Positives = 125/154 (81%), Gaps = 5/154 (3%) Frame = +3
Query: 189 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 368 G+ W+F R++IE+ SLSRRDGI L KE+ LRKSYC FLQDLGMRLKVPQ+TIAT+IVFCH Sbjct: 34 GASWYFSRKEIEENSLSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCH 93
Query: 369 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 548 RF+LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I HK+D A +RIKQK Sbjct: 94 RFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEIIHKKDAAAVQRIKQKS 153
Query: 549 -----VYEHEKEQVLLAENVVLQTLGFELNVIHP 635 V +KE +LL E VVL TLGF+LNV HP Sbjct: 154 LDYFGVEWQQKELILLGERVVLVTLGFDLNVHHP 187
>tr|A9SI06|A9SI06_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_130165 PE=3 SV=1 Length = 210
Score = 204 bits (518), Expect = 5e-51 Identities = 96/148 (64%), Positives = 121/148 (81%) Frame = +3
Query: 192 SGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCHR 371 + W+F R++IE++S SR DGI + KE RKSYC FLQDLGMRLKVPQ+TIAT+IVFCHR Sbjct: 34 ANWYFSRDEIEKQSPSRLDGIDIKKETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHR 93
Query: 372 FYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEV 551 F+ RQSH KNDR+ +AT CMFLAGKVEETP+ L+ V+ SY+IR K+D +AA+RI+QK+V Sbjct: 94 FFHRQSHKKNDRHMVATICMFLAGKVEETPRPLREVIMFSYEIRFKKDPIAAQRIRQKDV 153
Query: 552 YEHEKEQVLLAENVVLQTLGFELNVIHP 635 YE +KE VL E ++L TLGF+LNV HP Sbjct: 154 YEDQKELVLGGERLLLTTLGFDLNVHHP 181
>tr|A9TMA9|A9TMA9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_42949 PE=3 SV=1 Length = 406
Score = 202 bits (514), Expect = 1e-50 Identities = 95/148 (64%), Positives = 120/148 (81%) Frame = +3
Query: 192 SGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCHR 371 + W+F R++IE++S SR DGI + KE RKSYC FLQDLGMRLKVPQ+TIAT+IVFCHR Sbjct: 1 ANWYFSRDEIEKQSPSRLDGIDIKKETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHR 60
Query: 372 FYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEV 551 F+ RQSH KNDR+ +AT CMFLAGKVEETP+ L+ V+ SY+IR K+D +A +RI+QK+V Sbjct: 61 FFHRQSHKKNDRHMVATICMFLAGKVEETPRPLREVIMFSYEIRFKKDPIAVQRIRQKDV 120
Query: 552 YEHEKEQVLLAENVVLQTLGFELNVIHP 635 YE +KE VL E ++L TLGF+LNV HP Sbjct: 121 YEDQKELVLGGERLLLTTLGFDLNVHHP 148
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