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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950413
Clone id TST38A01NGRL0008_J11
Library
Length 617
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_J11. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
CACAGATCCTGACTATAAATTCGATCTCGCTGTTCAGTTAGGGGAGTTGGAAGTGGCAAA
GGATATTGCAGAGAAAGCCCAAAGCGAGTCTAAATGGAAGCAGCTTGGGGAGTTGGCAAT
GTCATCGGGAAAGCTGGATGTTGCTGAGGAGTGTATGACGAAGGCGGAAGATTTAAGTGG
TTTGTTACTGTTATATTCGTCGCTTGGAAACTCAACAGGAATGAAAAAGCTAGCTTCTTT
AGCTCAAGGGAAGGGGAAGATCAACGTGGCCTTTGTATGCCTCTTTATGCTTGGACAGCT
TGAAGAGTGTTTGCAACTTTTGGTTGATAGTAACCGCATACCTGAAGCTGCCTTCATGGC
CCGAGCATACCTTCCTAGTAAAGTTTCCGAGATTGTCAAGCTTTGGCGCAATGACCTGAA
AAAGATCAATCAGAAGGCTGCGGAATCTCTGGCGGATCCTCAAGAATATCCGAACTTGTT
TACAGACTGGCAATGGGCTTTAGAGGCGGAAGCAAGAATGAAACCCCTCAGAGAGAACCT
TTTACCAGCTAATGAGTACATGAACCATTTGGGACGCACAAAAATGAACATTATTGAGGA
AATGAAGGCCTTGCATT
■■Homology search results ■■ -
sp_hit_id Q5VQ78
Definition sp|Q5VQ78|COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica
Align length 204
Score (bit) 259.0
E-value 1.0e-68
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950413|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_J11, 5'
         (617 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5VQ78|COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza sativa s...   259   1e-68
sp|Q9CAA0|COB21_ARATH Coatomer subunit beta'-1 OS=Arabidopsis th...   248   1e-65
sp|Q6H8D5|COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza sativa s...   248   2e-65
sp|Q9C827|COB22_ARATH Coatomer subunit beta'-2 OS=Arabidopsis th...   245   1e-64
sp|Q8L828|COB23_ARATH Coatomer subunit beta'-3 OS=Arabidopsis th...   245   2e-64
sp|Q6H8D6|COB23_ORYSJ Putative coatomer subunit beta'-3 OS=Oryza...   244   2e-64
sp|O35142|COPB2_RAT Coatomer subunit beta' OS=Rattus norvegicus ...   186   1e-46
sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus musculus GN=...   186   1e-46
sp|P35605|COPB2_BOVIN Coatomer subunit beta' OS=Bos taurus GN=CO...   185   1e-46
sp|Q5R664|COPB2_PONAB Coatomer subunit beta' OS=Pongo abelii GN=...   183   5e-46
sp|P35606|COPB2_HUMAN Coatomer subunit beta' OS=Homo sapiens GN=...   183   7e-46
sp|Q4R4I8|COPB2_MACFA Coatomer subunit beta' OS=Macaca fascicula...   182   2e-45
sp|O62621|COPB2_DROME Coatomer subunit beta' OS=Drosophila melan...   155   2e-37
sp|Q54YD8|COPB2_DICDI Coatomer subunit beta' OS=Dictyostelium di...   155   2e-37
sp|Q20168|COPB2_CAEEL Probable coatomer subunit beta' OS=Caenorh...   130   7e-30
sp|O42937|COPB2_SCHPO Probable coatomer subunit beta' OS=Schizos...    91   5e-18
sp|P41811|COPB2_YEAST Coatomer subunit beta' OS=Saccharomyces ce...    79   1e-14
sp|P53622|COPA_YEAST Coatomer subunit alpha OS=Saccharomyces cer...    48   5e-05
sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosa...    45   4e-04
sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus musculus GN=C...    45   4e-04
sp|P53621|COPA_HUMAN Coatomer subunit alpha OS=Homo sapiens GN=C...    45   4e-04
sp|Q27954|COPA_BOVIN Coatomer subunit alpha OS=Bos taurus GN=COP...    45   4e-04
sp|Q5XQN5|K2C5_BOVIN Keratin, type II cytoskeletal 5 OS=Bos taur...    34   0.69 
sp|P34574|CLH_CAEEL Probable clathrin heavy chain 1 OS=Caenorhab...    33   0.90 
sp|A2QBZ0|SEC31_ASPNC Protein transport protein sec31 OS=Aspergi...    33   1.2  
sp|Q9U6A9|NOG1_TRYBB Nucleolar GTP-binding protein 1 OS=Trypanos...    33   1.5  
sp|P48668|K2C6C_HUMAN Keratin, type II cytoskeletal 6C OS=Homo s...    33   1.5  
sp|Q9Z331|K2C6B_MOUSE Keratin, type II cytoskeletal 6B OS=Mus mu...    33   1.5  
sp|P04259|K2C6B_HUMAN Keratin, type II cytoskeletal 6B OS=Homo s...    33   1.5  
sp|P50446|K2C6A_MOUSE Keratin, type II cytoskeletal 6A OS=Mus mu...    33   1.5  

>sp|Q5VQ78|COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza sativa subsp.
            japonica GN=Os06g0143900 PE=2 SV=1
          Length = 907

 Score =  259 bits (661), Expect = 1e-68
 Identities = 129/204 (63%), Positives = 157/204 (76%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TD DY+FDLAVQLG+LEVAK IA +AQSESKWKQLGELAMS+GKLD+AEEC+ +A+D   
Sbjct: 640  TDADYRFDLAVQLGKLEVAKAIAMEAQSESKWKQLGELAMSTGKLDMAEECLVQAKDLSG 699

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                        G++KLAS A+  GK NVAF+CLFMLG+LE+C+QLL+DSNRIPEAA MA
Sbjct: 700  LLLLYSSLGDAEGIEKLASQAKEHGKNNVAFLCLFMLGKLEDCIQLLIDSNRIPEAALMA 759

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R+YLPSKVSEIV +WRNDL K+N KAAESLADP EYPNLF DWQ AL  E  +   R + 
Sbjct: 760  RSYLPSKVSEIVAIWRNDLSKVNPKAAESLADPSEYPNLFEDWQVALTVEKNVASRRVHY 819

Query: 542  LPANEYMNHLGRTKMNIIEEMKAL 613
             PA+EY+NH  ++ M ++E  K +
Sbjct: 820  PPADEYLNHAEKSDMTLVEAFKRM 843


>sp|Q9CAA0|COB21_ARATH Coatomer subunit beta'-1 OS=Arabidopsis
            thaliana GN=At1g79990 PE=2 SV=2
          Length = 920

 Score =  248 bits (634), Expect = 1e-65
 Identities = 127/204 (62%), Positives = 151/204 (74%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TDPDY+F+LA+QLG L VAKDIA +AQ+ESKWKQLGELAMSSGKLD+AEECM  A D   
Sbjct: 639  TDPDYRFELAIQLGRLAVAKDIAVEAQNESKWKQLGELAMSSGKLDMAEECMRHAMDLSG 698

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                        GM KLA+LA+ +GK NVAF+CLFMLGQ+E+CL LLV+SNRIPEAA MA
Sbjct: 699  LLLLYSSLGDADGMMKLAALAKEQGKNNVAFLCLFMLGQVEDCLHLLVESNRIPEAALMA 758

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R+YLPSKVSEIV LWRNDL KI+ KAAESLADP+EYPNLF +WQ AL  E R    R   
Sbjct: 759  RSYLPSKVSEIVALWRNDLTKISPKAAESLADPEEYPNLFEEWQVALSLENRAAETRGVH 818

Query: 542  LPANEYMNHLGRTKMNIIEEMKAL 613
             PA +Y +H  R    +++  + +
Sbjct: 819  PPAGDYCSHADRDHTTLVDAFRIM 842


>sp|Q6H8D5|COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza sativa subsp.
            japonica GN=Os02g0209100 PE=2 SV=1
          Length = 910

 Score =  248 bits (633), Expect = 2e-65
 Identities = 125/205 (60%), Positives = 151/205 (73%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TD +Y+FDLAVQLG LEVAK IA +AQSESKW+QLGELAMS+GKLD+AEEC+  A D   
Sbjct: 640  TDSNYRFDLAVQLGRLEVAKAIAIEAQSESKWRQLGELAMSTGKLDMAEECLLHAMDLSG 699

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                        G+ KL S+A+ +GK NVAF+C FMLG+LEECLQLL++SNRIPEAA M+
Sbjct: 700  LLLLYSSLGDAEGLTKLTSMAKEQGKNNVAFLCFFMLGKLEECLQLLIESNRIPEAALMS 759

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R+YLPSKV EIV LW+ DL+K+N KAAESLADP EYPNLF DWQ AL  EA + P R   
Sbjct: 760  RSYLPSKVPEIVTLWKKDLQKVNPKAAESLADPDEYPNLFEDWQIALNVEANVAPKRGIY 819

Query: 542  LPANEYMNHLGRTKMNIIEEMKALH 616
             PA EY+ H  R    ++E  K++H
Sbjct: 820  PPAEEYIIHAERPNETLVEAFKSMH 844


>sp|Q9C827|COB22_ARATH Coatomer subunit beta'-2 OS=Arabidopsis
            thaliana GN=At1g52360 PE=2 SV=1
          Length = 926

 Score =  245 bits (626), Expect = 1e-64
 Identities = 124/204 (60%), Positives = 151/204 (74%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TDPDY+F+LA+QLG LE+A++IA + QSESKWKQLGELAMSSGKL +AEECM  A D   
Sbjct: 640  TDPDYRFELAIQLGRLEIAQEIAVEVQSESKWKQLGELAMSSGKLQMAEECMKYAMDLSG 699

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                        G+ KLA+LA+ +GK NVAF+CLFMLG+LE+CLQLLV+SNRIPEAA MA
Sbjct: 700  LLLLYSSLGDAEGVTKLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMA 759

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R+YLPSKVSEIV LWR DL K+N KAAESLADP+EY NLF DWQ AL  EA+    R   
Sbjct: 760  RSYLPSKVSEIVALWRKDLSKVNSKAAESLADPEEYSNLFEDWQVALSVEAKAVETRGVY 819

Query: 542  LPANEYMNHLGRTKMNIIEEMKAL 613
              A +Y +H  ++ M ++E  + L
Sbjct: 820  TGAKDYPSHADKSSMTLVEAFRNL 843


>sp|Q8L828|COB23_ARATH Coatomer subunit beta'-3 OS=Arabidopsis
            thaliana GN=At3g15980 PE=2 SV=1
          Length = 909

 Score =  245 bits (625), Expect = 2e-64
 Identities = 125/204 (61%), Positives = 147/204 (72%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TDPDYKFDLA+QLG LE+AK+IAE+ QSESKWKQLGELAMSSGKL +AE+CM  A D   
Sbjct: 640  TDPDYKFDLAIQLGRLEIAKEIAEEVQSESKWKQLGELAMSSGKLQLAEDCMKYAMDLSG 699

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                        G+ KLA LA+ +GK NVAF+CLF LG+LE+CLQLLV+SNRIPEAA MA
Sbjct: 700  LLLLYSSLGDAEGVSKLACLAKEQGKNNVAFLCLFTLGRLEDCLQLLVESNRIPEAALMA 759

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R+YLPSKVSEIV LWR DL K+N KAAESLADP+EY NLF DWQ AL  EA     R   
Sbjct: 760  RSYLPSKVSEIVALWREDLSKVNPKAAESLADPEEYSNLFEDWQVALSVEANTAETRGVY 819

Query: 542  LPANEYMNHLGRTKMNIIEEMKAL 613
              A  Y +H  +  + ++E  + L
Sbjct: 820  TAAENYPSHADKPSITLVEAFRNL 843


>sp|Q6H8D6|COB23_ORYSJ Putative coatomer subunit beta'-3 OS=Oryza
            sativa subsp. japonica GN=Os02g0209000 PE=3 SV=2
          Length = 910

 Score =  244 bits (624), Expect = 2e-64
 Identities = 124/202 (61%), Positives = 148/202 (73%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TD +Y+FDLAVQLG LEVAK IA +AQSESKW+QLGELAMS+GKLD+AEEC+  A D   
Sbjct: 640  TDSNYRFDLAVQLGRLEVAKAIAIEAQSESKWRQLGELAMSTGKLDMAEECLLHAMDLSG 699

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                        G+ KL S+A+ +GK NVAF+C FMLG+LEECLQLL++SNRIPEAA M+
Sbjct: 700  LLLLYSSLGDAEGLTKLTSMAKEQGKNNVAFLCFFMLGKLEECLQLLIESNRIPEAALMS 759

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R+YLPSKV EIV LW+ DL+K+N KAAESLADP EYPNLF DWQ AL  EA + P R   
Sbjct: 760  RSYLPSKVPEIVTLWKKDLQKVNPKAAESLADPNEYPNLFEDWQIALNVEANVAPKRGIY 819

Query: 542  LPANEYMNHLGRTKMNIIEEMK 607
             PA EY+ H  R    ++E  K
Sbjct: 820  APAKEYIIHAERPNETLVEAFK 841


>sp|O35142|COPB2_RAT Coatomer subunit beta' OS=Rattus norvegicus
            GN=Copb2 PE=2 SV=3
          Length = 905

 Score =  186 bits (471), Expect = 1e-46
 Identities = 95/202 (47%), Positives = 134/202 (66%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TDP+++F+LA+QLGEL++A  +A +A+SE KWKQL ELA+S  +  +A+EC+  A+D   
Sbjct: 639  TDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGG 698

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                       + + KLA  A+  GK NVAF+  F+ G+L+ CL+LL+ + R+PEAAF+A
Sbjct: 699  LLLLATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLA 758

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R YLPS+VS +VKLWR +L K+NQKAAESLADP EY NLF   + A   E  +K    +L
Sbjct: 759  RTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADL 818

Query: 542  LPANEYMNHLGRTKMNIIEEMK 607
             PA +Y       + N++EE K
Sbjct: 819  WPAKQYPLVTPNEERNVMEEAK 840


>sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus musculus GN=Copb2
            PE=2 SV=2
          Length = 905

 Score =  186 bits (471), Expect = 1e-46
 Identities = 95/202 (47%), Positives = 134/202 (66%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TDP+++F+LA+QLGEL++A  +A +A+SE KWKQL ELA+S  +  +A+EC+  A+D   
Sbjct: 639  TDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGG 698

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                       + + KLA  A+  GK NVAF+  F+ G+L+ CL+LL+ + R+PEAAF+A
Sbjct: 699  LLLLATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLA 758

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R YLPS+VS +VKLWR +L K+NQKAAESLADP EY NLF   + A   E  +K    +L
Sbjct: 759  RTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADL 818

Query: 542  LPANEYMNHLGRTKMNIIEEMK 607
             PA +Y       + N++EE K
Sbjct: 819  WPAKQYPLVTPNEERNVMEEAK 840


>sp|P35605|COPB2_BOVIN Coatomer subunit beta' OS=Bos taurus GN=COPB2
            PE=1 SV=3
          Length = 906

 Score =  185 bits (470), Expect = 1e-46
 Identities = 95/202 (47%), Positives = 134/202 (66%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TDP+++F+LA+QLGEL++A  +A +A+SE KWKQL ELA+S  +  +A+EC+  A+D   
Sbjct: 639  TDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGG 698

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                       + + KLA  A+  GK NVAF+  F+ G+L+ CL+LL+ + R+PEAAF+A
Sbjct: 699  LLLLATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLA 758

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R YLPS+VS +VKLWR +L K+NQKAAESLADP EY NLF   + A   E  +K    +L
Sbjct: 759  RTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADL 818

Query: 542  LPANEYMNHLGRTKMNIIEEMK 607
             PA +Y       + N++EE K
Sbjct: 819  WPAKQYPLVTPNEERNVMEEAK 840


>sp|Q5R664|COPB2_PONAB Coatomer subunit beta' OS=Pongo abelii GN=COPB2
            PE=2 SV=1
          Length = 906

 Score =  183 bits (465), Expect = 5e-46
 Identities = 94/202 (46%), Positives = 132/202 (65%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TDP+++F+LA+QLGEL++A  +A +A+SE KWKQL ELA+S  +  +A+EC+  A+D   
Sbjct: 639  TDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGG 698

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                         + KLA  A+  GK NVAF+  F+ G+++ CL+LL+ + R+PEAAF+A
Sbjct: 699  LLLLATASGNANMVNKLAEGAERDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLA 758

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R YLPS+VS +VKLWR +L K+NQKAAESLADP EY NLF   + A   E  +K     L
Sbjct: 759  RTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHAEL 818

Query: 542  LPANEYMNHLGRTKMNIIEEMK 607
             PA +Y       + N++EE K
Sbjct: 819  WPAKQYPLVTPNEERNVMEEAK 840
tr_hit_id Q5VQ77
Definition tr|Q5VQ77|Q5VQ77_ORYSJ Coatomer protein complex, beta prime subunit-like OS=Oryza sativa subsp. japonica
Align length 204
Score (bit) 259.0
E-value 1.0e-67
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950413|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_J11, 5'
         (617 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5VQ77|Q5VQ77_ORYSJ Coatomer protein complex, beta prime subu...   259   1e-67
tr|A3B8B8|A3B8B8_ORYSJ Putative uncharacterized protein OS=Oryza...   259   1e-67
tr|A2Y963|A2Y963_ORYSI Putative uncharacterized protein OS=Oryza...   259   1e-67
tr|A7P7E9|A7P7E9_VITVI Chromosome chr9 scaffold_7, whole genome ...   257   3e-67
tr|A5AWP2|A5AWP2_VITVI Putative uncharacterized protein OS=Vitis...   257   3e-67
tr|A9SAN0|A9SAN0_PHYPA Predicted protein OS=Physcomitrella paten...   257   4e-67
tr|A1YKF7|A1YKF7_BRASY Coatomer complex subunit OS=Brachypodium ...   256   6e-67
tr|A7PES4|A7PES4_VITVI Chromosome chr11 scaffold_13, whole genom...   249   1e-64
tr|B3H5V5|B3H5V5_ARATH Uncharacterized protein At1g79990.2 OS=Ar...   248   2e-64
tr|A9PF13|A9PF13_POPTR Putative uncharacterized protein OS=Popul...   247   3e-64
tr|A9TJC1|A9TJC1_PHYPA Predicted protein OS=Physcomitrella paten...   246   8e-64
tr|A9SHI8|A9SHI8_PHYPA Predicted protein OS=Physcomitrella paten...   243   7e-63
tr|B8ADW8|B8ADW8_ORYSI Putative uncharacterized protein OS=Oryza...   235   2e-60
tr|A3A4F1|A3A4F1_ORYSJ Putative uncharacterized protein OS=Oryza...   218   3e-55
tr|A3A4F0|A3A4F0_ORYSJ Putative uncharacterized protein OS=Oryza...   214   3e-54
tr|A3EXX1|A3EXX1_MACHI Putative coatomer protein complex, subuni...   198   2e-49
tr|A7RL77|A7RL77_NEMVE Predicted protein OS=Nematostella vectens...   194   3e-48
tr|B8AE85|B8AE85_ORYSI Putative uncharacterized protein OS=Oryza...   191   4e-47
tr|Q7ZTR0|Q7ZTR0_XENLA Wu:fc55e05-prov protein OS=Xenopus laevis...   189   1e-46
tr|Q4VA86|Q4VA86_XENTR Putative uncharacterized protein mgc10808...   188   2e-46
tr|A8JGS8|A8JGS8_CHLRE Beta'-cop OS=Chlamydomonas reinhardtii GN...   188   2e-46
tr|Q5M7X1|Q5M7X1_RAT Coatomer protein complex, subunit beta 2 (B...   186   1e-45
tr|B4DZI8|B4DZI8_HUMAN cDNA FLJ56271, highly similar to Coatomer...   183   8e-45
tr|Q6JWU7|Q6JWU7_DANRE Coatomer protein complex subunit beta 2 O...   181   2e-44
tr|B3DH83|B3DH83_DANRE Coatomer protein complex, subunit beta 2 ...   181   2e-44
tr|B0R171|B0R171_DANRE Coatomer protein complex, subunit beta 2 ...   181   2e-44
tr|A4RR16|A4RR16_OSTLU Predicted protein OS=Ostreococcus lucimar...   177   6e-43
tr|Q4SBJ7|Q4SBJ7_TETNG Chromosome 15 SCAF14667, whole genome sho...   174   5e-42
tr|B6LX76|B6LX76_BRAFL Putative uncharacterized protein OS=Branc...   173   8e-42
tr|Q01GI8|Q01GI8_OSTTA Coatomer complex subunit, putative; 33791...   172   1e-41

>tr|Q5VQ77|Q5VQ77_ORYSJ Coatomer protein complex, beta prime
           subunit-like OS=Oryza sativa subsp. japonica
           GN=OSJNBa0007O20.8-2 PE=4 SV=1
          Length = 328

 Score =  259 bits (661), Expect = 1e-67
 Identities = 129/204 (63%), Positives = 157/204 (76%)
 Frame = +2

Query: 2   TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
           TD DY+FDLAVQLG+LEVAK IA +AQSESKWKQLGELAMS+GKLD+AEEC+ +A+D   
Sbjct: 57  TDADYRFDLAVQLGKLEVAKAIAMEAQSESKWKQLGELAMSTGKLDMAEECLVQAKDLSG 116

Query: 182 XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                       G++KLAS A+  GK NVAF+CLFMLG+LE+C+QLL+DSNRIPEAA MA
Sbjct: 117 LLLLYSSLGDAEGIEKLASQAKEHGKNNVAFLCLFMLGKLEDCIQLLIDSNRIPEAALMA 176

Query: 362 RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
           R+YLPSKVSEIV +WRNDL K+N KAAESLADP EYPNLF DWQ AL  E  +   R + 
Sbjct: 177 RSYLPSKVSEIVAIWRNDLSKVNPKAAESLADPSEYPNLFEDWQVALTVEKNVASRRVHY 236

Query: 542 LPANEYMNHLGRTKMNIIEEMKAL 613
            PA+EY+NH  ++ M ++E  K +
Sbjct: 237 PPADEYLNHAEKSDMTLVEAFKRM 260


>tr|A3B8B8|A3B8B8_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_019290 PE=4 SV=1
          Length = 902

 Score =  259 bits (661), Expect = 1e-67
 Identities = 129/204 (63%), Positives = 157/204 (76%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TD DY+FDLAVQLG+LEVAK IA +AQSESKWKQLGELAMS+GKLD+AEEC+ +A+D   
Sbjct: 635  TDADYRFDLAVQLGKLEVAKAIAMEAQSESKWKQLGELAMSTGKLDMAEECLVQAKDLSG 694

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                        G++KLAS A+  GK NVAF+CLFMLG+LE+C+QLL+DSNRIPEAA MA
Sbjct: 695  LLLLYSSLGDAEGIEKLASQAKEHGKNNVAFLCLFMLGKLEDCIQLLIDSNRIPEAALMA 754

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R+YLPSKVSEIV +WRNDL K+N KAAESLADP EYPNLF DWQ AL  E  +   R + 
Sbjct: 755  RSYLPSKVSEIVAIWRNDLSKVNPKAAESLADPSEYPNLFEDWQVALTVEKNVASRRVHY 814

Query: 542  LPANEYMNHLGRTKMNIIEEMKAL 613
             PA+EY+NH  ++ M ++E  K +
Sbjct: 815  PPADEYLNHAEKSDMTLVEAFKRM 838


>tr|A2Y963|A2Y963_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_21602 PE=4 SV=1
          Length = 902

 Score =  259 bits (661), Expect = 1e-67
 Identities = 129/204 (63%), Positives = 157/204 (76%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TD DY+FDLAVQLG+LEVAK IA +AQSESKWKQLGELAMS+GKLD+AEEC+ +A+D   
Sbjct: 635  TDADYRFDLAVQLGKLEVAKAIAMEAQSESKWKQLGELAMSTGKLDMAEECLVQAKDLSG 694

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                        G++KLAS A+  GK NVAF+CLFMLG+LE+C+QLL+DSNRIPEAA MA
Sbjct: 695  LLLLYSSLGDAEGIEKLASQAKEHGKNNVAFLCLFMLGKLEDCIQLLIDSNRIPEAALMA 754

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R+YLPSKVSEIV +WRNDL K+N KAAESLADP EYPNLF DWQ AL  E  +   R + 
Sbjct: 755  RSYLPSKVSEIVAIWRNDLSKVNPKAAESLADPSEYPNLFEDWQVALTVEKNVASRRVHY 814

Query: 542  LPANEYMNHLGRTKMNIIEEMKAL 613
             PA+EY+NH  ++ M ++E  K +
Sbjct: 815  PPADEYLNHAEKSDMTLVEAFKRM 838


>tr|A7P7E9|A7P7E9_VITVI Chromosome chr9 scaffold_7, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00034434001
            PE=4 SV=1
          Length = 1017

 Score =  257 bits (657), Expect = 3e-67
 Identities = 130/204 (63%), Positives = 155/204 (75%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TDPDY+F+LA+QLG LEVAKDIA + QSESKWKQLGELAMS+GKL++AEEC+  A D   
Sbjct: 697  TDPDYRFELAMQLGRLEVAKDIATEVQSESKWKQLGELAMSTGKLEMAEECLKHAMDLSG 756

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                        G+ KLASLA+ +GK NVAF+CLFMLG+LEECLQLLVDSNRIPEAA MA
Sbjct: 757  LLLLYSSLGDADGISKLASLAKEQGKNNVAFLCLFMLGKLEECLQLLVDSNRIPEAALMA 816

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R+YLPSKVSEIV LWR DL K+N KAAESLADP+EYPNLF DWQ  L  E+++   R   
Sbjct: 817  RSYLPSKVSEIVALWRKDLNKVNPKAAESLADPEEYPNLFEDWQVGLAIESKVAETRSIY 876

Query: 542  LPANEYMNHLGRTKMNIIEEMKAL 613
             PA EY+N   R+ +N++E  + L
Sbjct: 877  PPAEEYLNCADRSHINLVEAFRNL 900


>tr|A5AWP2|A5AWP2_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_004513 PE=4 SV=1
          Length = 901

 Score =  257 bits (657), Expect = 3e-67
 Identities = 130/204 (63%), Positives = 155/204 (75%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TDPDY+F+LA+QLG LEVAKDIA + QSESKWKQLGELAMS+GKL++AEEC+  A D   
Sbjct: 633  TDPDYRFELAMQLGRLEVAKDIATEVQSESKWKQLGELAMSTGKLEMAEECLKHAMDLSG 692

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                        G+ KLASLA+ +GK NVAF+CLFMLG+LEECLQLLVDSNRIPEAA MA
Sbjct: 693  LLLLYSSLGDADGISKLASLAKEQGKNNVAFLCLFMLGKLEECLQLLVDSNRIPEAALMA 752

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R+YLPSKVSEIV LWR DL K+N KAAESLADP+EYPNLF DWQ  L  E+++   R   
Sbjct: 753  RSYLPSKVSEIVALWRKDLNKVNPKAAESLADPEEYPNLFEDWQVGLAIESKVAETRSIY 812

Query: 542  LPANEYMNHLGRTKMNIIEEMKAL 613
             PA EY+N   R+ +N++E  + L
Sbjct: 813  PPAEEYLNCADRSHINLVEAFRNL 836


>tr|A9SAN0|A9SAN0_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_210315 PE=4 SV=1
          Length = 909

 Score =  257 bits (656), Expect = 4e-67
 Identities = 126/204 (61%), Positives = 158/204 (77%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TDPDYKFDLAVQLG+L++AK IAE++ SESKWKQLGELAMS+GKLDVAEEC+ +A+D   
Sbjct: 640  TDPDYKFDLAVQLGKLDMAKAIAEESHSESKWKQLGELAMSAGKLDVAEECLNQAKDQSG 699

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                        G+++LA+ A+  GK NVAFV LF+LG++EEC+ LL++SNRIPEAAFMA
Sbjct: 700  LLLLYSAVGDAEGLERLAASARENGKNNVAFVSLFLLGKVEECIDLLIESNRIPEAAFMA 759

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R Y PS VS IV LWRNDLKKINQKAAESLADP+EYPNLF+DW+ AL  EA+MK LR   
Sbjct: 760  RTYAPSHVSRIVSLWRNDLKKINQKAAESLADPEEYPNLFSDWESALATEAKMKDLRSKY 819

Query: 542  LPANEYMNHLGRTKMNIIEEMKAL 613
            +PA  Y+N +   +  + E+++ L
Sbjct: 820  IPAATYLNFINGVEEELTEDLQGL 843


>tr|A1YKF7|A1YKF7_BRASY Coatomer complex subunit OS=Brachypodium
            sylvaticum GN=57h21.22 PE=4 SV=1
          Length = 911

 Score =  256 bits (655), Expect = 6e-67
 Identities = 129/204 (63%), Positives = 155/204 (75%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TD DYKFDLAVQLG LEVAKDIA +AQSESKWKQLGELAMS+GKL+ AEEC+ +A+D   
Sbjct: 640  TDADYKFDLAVQLGRLEVAKDIAVEAQSESKWKQLGELAMSTGKLEAAEECLLQAKDLSG 699

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                        G++KLASLA+  GK NVAF+CLFMLG+LE+C+QLLVDSNRIPEAA MA
Sbjct: 700  LLLLYSSLGDAIGIEKLASLAKEHGKNNVAFLCLFMLGKLEDCIQLLVDSNRIPEAALMA 759

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R+YLPSKVSEIV  WRNDL K+N KAA+SLADP EYPNLF DWQ AL  E  + P R + 
Sbjct: 760  RSYLPSKVSEIVATWRNDLSKVNPKAADSLADPSEYPNLFEDWQVALTVEKNIAPQRGHY 819

Query: 542  LPANEYMNHLGRTKMNIIEEMKAL 613
              A+EY+N+  ++   ++E  K +
Sbjct: 820  PSADEYLNYADKSDSTLVEAFKRM 843


>tr|A7PES4|A7PES4_VITVI Chromosome chr11 scaffold_13, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00016769001
            PE=4 SV=1
          Length = 899

 Score =  249 bits (635), Expect = 1e-64
 Identities = 120/204 (58%), Positives = 154/204 (75%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TDPDY+FDLA+QLG L  AK+IA + QSE+KWKQLGELAMS+GK ++AEEC+  A D   
Sbjct: 660  TDPDYRFDLAIQLGRLGTAKEIASEVQSETKWKQLGELAMSNGKFEMAEECLLHAMDLSG 719

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                        G+ KL SLA+ +GK NVAF+CLF LG+LEECLQLLV+SNRIPEAA MA
Sbjct: 720  LLLLYSSFGDANGISKLVSLAKKQGKNNVAFLCLFTLGKLEECLQLLVESNRIPEAALMA 779

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R+YLPSKV EI+ +WRNDL K+++KAAESLADP+EYPNLF DWQ AL+ E+++   R   
Sbjct: 780  RSYLPSKVPEIITIWRNDLNKVSKKAAESLADPEEYPNLFEDWQVALDIESKISEKRGTY 839

Query: 542  LPANEYMNHLGRTKMNIIEEMKAL 613
             PA  Y+N+  R+ +N++E  K++
Sbjct: 840  PPAEHYLNYAERSNINLMESFKSM 863


>tr|B3H5V5|B3H5V5_ARATH Uncharacterized protein At1g79990.2
            OS=Arabidopsis thaliana GN=At1g79990 PE=4 SV=1
          Length = 912

 Score =  248 bits (634), Expect = 2e-64
 Identities = 127/204 (62%), Positives = 151/204 (74%)
 Frame = +2

Query: 2    TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
            TDPDY+F+LA+QLG L VAKDIA +AQ+ESKWKQLGELAMSSGKLD+AEECM  A D   
Sbjct: 639  TDPDYRFELAIQLGRLAVAKDIAVEAQNESKWKQLGELAMSSGKLDMAEECMRHAMDLSG 698

Query: 182  XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                        GM KLA+LA+ +GK NVAF+CLFMLGQ+E+CL LLV+SNRIPEAA MA
Sbjct: 699  LLLLYSSLGDADGMMKLAALAKEQGKNNVAFLCLFMLGQVEDCLHLLVESNRIPEAALMA 758

Query: 362  RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
            R+YLPSKVSEIV LWRNDL KI+ KAAESLADP+EYPNLF +WQ AL  E R    R   
Sbjct: 759  RSYLPSKVSEIVALWRNDLTKISPKAAESLADPEEYPNLFEEWQVALSLENRAAETRGVH 818

Query: 542  LPANEYMNHLGRTKMNIIEEMKAL 613
             PA +Y +H  R    +++  + +
Sbjct: 819  PPAGDYCSHADRDHTTLVDAFRIM 842


>tr|A9PF13|A9PF13_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 470

 Score =  247 bits (631), Expect = 3e-64
 Identities = 123/202 (60%), Positives = 149/202 (73%)
 Frame = +2

Query: 2   TDPDYKFDLAVQLGELEVAKDIAEKAQSESKWKQLGELAMSSGKLDVAEECMTKAEDXXX 181
           TDPDY+F+LA+QLG LEVAK+IA + QSESKWKQLGELAMS+GKL++AEECM  A D   
Sbjct: 199 TDPDYRFELAIQLGRLEVAKEIAIEVQSESKWKQLGELAMSNGKLEMAEECMKHATDLSG 258

Query: 182 XXXXXXXXXXXTGMKKLASLAQGKGKINVAFVCLFMLGQLEECLQLLVDSNRIPEAAFMA 361
                       G+ KL SLA  +GKINVAF+CLFMLG++E+CLQLLV+ NRIPEAA MA
Sbjct: 259 LLLLYSSLGDAEGISKLGSLAIEQGKINVAFLCLFMLGKVEDCLQLLVERNRIPEAALMA 318

Query: 362 RAYLPSKVSEIVKLWRNDLKKINQKAAESLADPQEYPNLFTDWQWALEAEARMKPLRENL 541
           R+YLPSKVSEIV LWR DL K+N KAAESLADP+EYPN+F DWQ AL  E+R    R   
Sbjct: 319 RSYLPSKVSEIVALWRKDLNKVNPKAAESLADPEEYPNMFDDWQIALSVESRAAETRGVY 378

Query: 542 LPANEYMNHLGRTKMNIIEEMK 607
            PA +Y  H  +  + ++E  +
Sbjct: 379 PPAEDYQTHADKPHITLVEAFR 400