DK950417 [AcEST]

DK950417
Clone id	TST38A01NGRL0008_J16
Library	TST38
Length	163
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_J16. 5' end sequence.
Accession	DK950417
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	CL2664Contig1
Sequence	GTAGATTGGCATCTGATGAGTCTCATGAGAGAGGACTGTATGCTTTATCTCAGGCAAGCG TTTCAGGAGTGAGTTTGTCACGTGGAGGACGGTGTACTGGACGCGACGTATCCTGCACTG ATGTGCGCGGGGATGAAGATTGCCATGACATTGATGTAAAACA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	O84579
Definition	sp\|O84579\|MUTL_CHLTR DNA mismatch repair protein mutL OS=Chlamydia trachomatis
Align length	53
Score (bit)	30.4
E-value	2.9
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK950417\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_J16, 5' (163 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|O84579\|MUTL_CHLTR DNA mismatch repair protein mutL OS=Chlamyd... 30 2.9 sp\|Q3KLC2\|MUTL_CHLTA DNA mismatch repair protein mutL OS=Chlamyd... 30 2.9 >sp\|O84579\|MUTL_CHLTR DNA mismatch repair protein mutL OS=Chlamydia trachomatis GN=mutL PE=3 SV=1 Length = 576 Score = 30.4 bits (67), Expect = 2.9 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Frame = -2 Query: 150 CHGNLHPRAHQCRIRRV----QYTVLHVTNSLLKRLPEIKHTVLSHETHQMPI 4 C N+HP+ + R+ + V ++ +LL+R P ++ TVL T ++PI Sbjct: 298 CDFNVHPQKTEVRLLQEGQISNLLVEAISEALLRRSPSLEETVLKVPTEKIPI 350 >sp\|Q3KLC2\|MUTL_CHLTA DNA mismatch repair protein mutL OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=mutL PE=3 SV=1 Length = 576 Score = 30.4 bits (67), Expect = 2.9 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Frame = -2 Query: 150 CHGNLHPRAHQCRIRRV----QYTVLHVTNSLLKRLPEIKHTVLSHETHQMPI 4 C N+HP+ + R+ + V ++ +LL+R P ++ TVL T ++PI Sbjct: 298 CDFNVHPQKTEVRLLQEGQISNLLVEAISEALLRRSPSLEETVLKVPTEKIPI 350
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A4H8J3
Definition	tr\|A4H8J3\|A4H8J3_LEIBR Putative uncharacterized protein OS=Leishmania braziliensis
Align length	34
Score (bit)	32.7
E-value	9.3
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK950417\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_J16, 5' (163 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A4H8J3\|A4H8J3_LEIBR Putative uncharacterized protein OS=Leish... 33 9.3 >tr\|A4H8J3\|A4H8J3_LEIBR Putative uncharacterized protein OS=Leishmania braziliensis GN=LbrM16_V2.0700 PE=4 SV=1 Length = 1026 Score = 32.7 bits (73), Expect = 9.3 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -1 Query: 163 CFTSMSWQSSSPRTSVQDTSRPVHRPPRDKLTPE 62 C ++ S+ ++SPR TSR HRPPR PE Sbjct: 321 CASNESFPTTSPRHGRDRTSRKPHRPPRTHSAPE 354