DK950440 |
Clone id |
TST38A01NGRL0008_K15 |
Library |
TST38 |
Length |
662 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_K15. 5' end sequence. |
Accession |
DK950440 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL796Contig1 |
Sequence |
GCAGGGCCATTTTAGCTCAAGCAAAGAACGATCCCAAATCGTGCACTTCTAGCACCAGAT GTCTTACTCCATCATTAGCATCTGATGATGAAAGAATTGGACTTAGAGATACACAACTAC GGCAGGAGCTTGAACGTATCATGGAAGAGACTCCTAGCGAGTTGGAAACCTTTGAGTCTT CACACACTTGCTCTAGTACTGGCCCTCCTGCTGTGAGCCTCTTCTTGAGGGCACTGCAGC TCACTGCTGATCACAGCACCAATGTTGACGAGGAAGTTCTTCGCATAAAGTCAGAGCACC CTGATGATGAGAAATCGATTTTCAATGAGCGTGTCAAGGGACAGTTGAAAGTAACCAGAG CCTTCTGTGCTGGCTTCTTGAAATCGCCTAGGTGGAATGATGCCCTTCTCGAGATGTTTC GTGTTGATTATGTGGGTACAGCTCCATATGTTACTTGCATACCTGCCATTCACCACCATT CCCTAGGGCCCAATGATCGATTCTTGGTCCTGTCCTCGGATGGGTTGTATCAGTATTTGA GCAACGAACAAGTTGTTTCTCATGTTGAATGGTTCATGGAAAACTACCCTGATGGAGATC CTGCGCAGTATCTGATTGAAGAGCTACTTTTTCGAGCTGCAGAGAAAGCAGGGATGGACT TC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8RWN7 |
Definition |
sp|Q8RWN7|POL_ARATH Protein phosphatase 2C POL OS=Arabidopsis thaliana |
Align length |
197 |
Score (bit) |
228.0 |
E-value |
2.0e-59 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S877 |
Definition |
tr|A9S877|A9S877_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
188 |
Score (bit) |
251.0 |
E-value |
3.0e-65 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950440|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_K15, 5' (662 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S877|A9S877_PHYPA Predicted protein OS=Physcomitrella paten... 251 3e-65 tr|A9U144|A9U144_PHYPA Predicted protein OS=Physcomitrella paten... 251 4e-65 tr|A7Q0W9|A7Q0W9_VITVI Chromosome chr7 scaffold_42, whole genome... 249 1e-64 tr|A5C2V8|A5C2V8_VITVI Putative uncharacterized protein OS=Vitis... 249 1e-64 tr|Q84TS1|Q84TS1_ORYSJ Os03g0372500 protein OS=Oryza sativa subs... 241 4e-62 tr|A2XH85|A2XH85_ORYSI Putative uncharacterized protein OS=Oryza... 239 1e-61 tr|A7NZ18|A7NZ18_VITVI Chromosome chr6 scaffold_3, whole genome ... 238 2e-61 tr|A7PNM2|A7PNM2_VITVI Chromosome chr8 scaffold_23, whole genome... 230 5e-59 tr|B8Q8C1|B8Q8C1_ORYSI SKIP interacting protein 35 (Fragment) OS... 217 5e-55 tr|A7PCA4|A7PCA4_VITVI Chromosome chr2 scaffold_11, whole genome... 217 5e-55 tr|A2XNG4|A2XNG4_ORYSI Putative uncharacterized protein OS=Oryza... 217 5e-55 tr|A3AIE2|A3AIE2_ORYSJ Putative uncharacterized protein OS=Oryza... 208 3e-52 tr|A2X8H4|A2X8H4_ORYSI Putative uncharacterized protein OS=Oryza... 207 6e-52 tr|A2XZL2|A2XZL2_ORYSI Putative uncharacterized protein OS=Oryza... 191 5e-47 tr|B3VTB3|B3VTB3_SORBI Protein phosphatase type 2C OS=Sorghum bi... 190 8e-47 tr|B8AKR5|B8AKR5_ORYSI Putative uncharacterized protein OS=Oryza... 186 1e-45 tr|A2XF31|A2XF31_ORYSI Putative uncharacterized protein OS=Oryza... 186 1e-45 tr|A5BQ00|A5BQ00_VITVI Putative uncharacterized protein OS=Vitis... 179 1e-43 tr|A9SCW3|A9SCW3_PHYPA Predicted protein (Fragment) OS=Physcomit... 137 5e-31 tr|A9TIJ9|A9TIJ9_PHYPA Predicted protein OS=Physcomitrella paten... 130 7e-29 tr|A7QTB9|A7QTB9_VITVI Chromosome chr1 scaffold_166, whole genom... 129 2e-28 tr|A5AFY8|A5AFY8_VITVI Putative uncharacterized protein OS=Vitis... 128 3e-28 tr|B6T998|B6T998_MAIZE Protein phosphatase 2C containing protein... 125 3e-27 tr|A2XT23|A2XT23_ORYSI Putative uncharacterized protein OS=Oryza... 122 2e-26 tr|A7NW44|A7NW44_VITVI Chromosome chr5 scaffold_2, whole genome ... 122 3e-26 tr|B8LQT5|B8LQT5_PICSI Putative uncharacterized protein OS=Picea... 86 3e-15 tr|Q9LSN8|Q9LSN8_ARATH Protein phosphatase 2C-like protein OS=Ar... 85 3e-15 tr|Q8LEW2|Q8LEW2_ARATH Protein phosphatase-2c, putative OS=Arabi... 85 3e-15 tr|Q0V7V2|Q0V7V2_ARATH At3g17090 OS=Arabidopsis thaliana PE=2 SV=1 85 3e-15 tr|B6TZR2|B6TZR2_MAIZE Protein phosphatase 2C OS=Zea mays PE=2 SV=1 81 5e-14
>tr|A9S877|A9S877_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_209656 PE=4 SV=1 Length = 686
Score = 251 bits (641), Expect = 3e-65 Identities = 125/188 (66%), Positives = 148/188 (78%) Frame = +3
Query: 96 IGLRDTQLRQELERIMEETPSELETFESSHTCSSTGPPAVSLFLRALQLTADHSTNVDEE 275 IG RD+ LRQELERI+EETP+E+E E+ PP +SL L ALQLT DHST+ +EE Sbjct: 459 IGARDSLLRQELERIIEETPTEIEALEAHDPNLGPPPPGLSL-LGALQLTEDHSTSTEEE 517
Query: 276 VLRIKSEHPDDEKSIFNERVKGQLKVTRAFCAGFLKSPRWNDALLEMFRVDYVGTAPYVT 455 V R+++EHP D+ I N+RVKG+LKVTRAF AGFLK PR N+ L EMFR ++G PY++ Sbjct: 518 VQRLRAEHPFDDDIISNDRVKGRLKVTRAFGAGFLKQPRLNNVLFEMFRCKFIGNDPYIS 577
Query: 456 CIPAIHHHSLGPNDRFLVLSSDGLYQYLSNEQVVSHVEWFMENYPDGDPAQYLIEELLFR 635 C P + HH LGP DRFLVLSSDGLYQYLSNE+VVSHVEWFME PDGDPAQ LIEELLFR Sbjct: 578 CDPCLRHHKLGPQDRFLVLSSDGLYQYLSNEEVVSHVEWFMERCPDGDPAQRLIEELLFR 637
Query: 636 AAEKAGMD 659 AA+K GM+ Sbjct: 638 AAKKNGME 645
>tr|A9U144|A9U144_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227370 PE=4 SV=1 Length = 719
Score = 251 bits (640), Expect = 4e-65 Identities = 126/193 (65%), Positives = 151/193 (78%), Gaps = 1/193 (0%) Frame = +3
Query: 84 DDERIGLRDTQLRQELERIMEETPSELETFESSHTCSSTGPPAVSL-FLRALQLTADHST 260 + ERIG RD+ LRQELERI+EETP+E+E E+ + GPP + L L ALQLT DHST Sbjct: 488 EHERIGARDSLLRQELERIIEETPTEIEALEAHDP--NLGPPPLGLSLLGALQLTEDHST 545
Query: 261 NVDEEVLRIKSEHPDDEKSIFNERVKGQLKVTRAFCAGFLKSPRWNDALLEMFRVDYVGT 440 + +EEV R+++EHP D+ I N+RVKG+LKVTRAF AGFLK PR N+ L EMFR ++G Sbjct: 546 STEEEVQRLRAEHPFDDDIISNDRVKGRLKVTRAFGAGFLKQPRLNNVLFEMFRCKFIGN 605
Query: 441 APYVTCIPAIHHHSLGPNDRFLVLSSDGLYQYLSNEQVVSHVEWFMENYPDGDPAQYLIE 620 PY++C P + HH LGP DRFLVLSSDGLYQYLSNE+VVS VEWFME PDGDPAQ LIE Sbjct: 606 DPYISCDPCLRHHKLGPQDRFLVLSSDGLYQYLSNEEVVSRVEWFMERCPDGDPAQRLIE 665
Query: 621 ELLFRAAEKAGMD 659 ELLFRAA+K GM+ Sbjct: 666 ELLFRAAKKNGME 678
>tr|A7Q0W9|A7Q0W9_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028211001 PE=4 SV=1 Length = 383
Score = 249 bits (635), Expect = 1e-64 Identities = 129/222 (58%), Positives = 163/222 (73%), Gaps = 2/222 (0%) Frame = +3
Query: 3 RAILAQAKNDPKSCTSSTRCLTPSLASDD--ERIGLRDTQLRQELERIMEETPSELETFE 176 R ILAQ + + R P+LA DD R R++ +R EL+RI EE+P + + Sbjct: 135 RVILAQER-------PNDRHPNPNLAKDDVRHRNRSRESLVRMELDRISEESPMHNQNCQ 187
Query: 177 SSHTCSSTGPPAVSLFLRALQLTADHSTNVDEEVLRIKSEHPDDEKSIFNERVKGQLKVT 356 + + L +RA+QL+ DHST+++EEVLRIK+EH DD ++I N+RVKGQLKVT Sbjct: 188 VNKANKNREISFCRLKMRAVQLSTDHSTSIEEEVLRIKAEHVDDNQAILNDRVKGQLKVT 247
Query: 357 RAFCAGFLKSPRWNDALLEMFRVDYVGTAPYVTCIPAIHHHSLGPNDRFLVLSSDGLYQY 536 RAF AGFLK P+ N+ALLEMF++DYVGT PYV+CIP++ HH L +DRFLVLSSDGLYQY Sbjct: 248 RAFGAGFLKEPKCNEALLEMFQIDYVGTTPYVSCIPSVLHHRLSSSDRFLVLSSDGLYQY 307
Query: 537 LSNEQVVSHVEWFMENYPDGDPAQYLIEELLFRAAEKAGMDF 662 SNE+VV+HV WFMEN P+GDPAQYLI ELLFRAA+K GMDF Sbjct: 308 FSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDF 349
>tr|A5C2V8|A5C2V8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031357 PE=4 SV=1 Length = 871
Score = 249 bits (635), Expect = 1e-64 Identities = 129/222 (58%), Positives = 163/222 (73%), Gaps = 2/222 (0%) Frame = +3
Query: 3 RAILAQAKNDPKSCTSSTRCLTPSLASDD--ERIGLRDTQLRQELERIMEETPSELETFE 176 R ILAQ + + R P+LA DD R R++ +R EL+RI EE+P + + Sbjct: 623 RVILAQER-------PNDRHPNPNLAKDDVRHRNRSRESLVRMELDRISEESPMHNQNCQ 675
Query: 177 SSHTCSSTGPPAVSLFLRALQLTADHSTNVDEEVLRIKSEHPDDEKSIFNERVKGQLKVT 356 + + L +RA+QL+ DHST+++EEVLRIK+EH DD ++I N+RVKGQLKVT Sbjct: 676 VNKANKNREISFCRLKMRAVQLSTDHSTSIEEEVLRIKAEHVDDNQAILNDRVKGQLKVT 735
Query: 357 RAFCAGFLKSPRWNDALLEMFRVDYVGTAPYVTCIPAIHHHSLGPNDRFLVLSSDGLYQY 536 RAF AGFLK P+ N+ALLEMF++DYVGT PYV+CIP++ HH L +DRFLVLSSDGLYQY Sbjct: 736 RAFGAGFLKEPKCNEALLEMFQIDYVGTTPYVSCIPSVLHHRLSSSDRFLVLSSDGLYQY 795
Query: 537 LSNEQVVSHVEWFMENYPDGDPAQYLIEELLFRAAEKAGMDF 662 SNE+VV+HV WFMEN P+GDPAQYLI ELLFRAA+K GMDF Sbjct: 796 FSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDF 837
>tr|Q84TS1|Q84TS1_ORYSJ Os03g0372500 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0097F01.10 PE=2 SV=1 Length = 977
Score = 241 bits (614), Expect = 4e-62 Identities = 117/186 (62%), Positives = 145/186 (77%) Frame = +3
Query: 105 RDTQLRQELERIMEETPSELETFESSHTCSSTGPPAVSLFLRALQLTADHSTNVDEEVLR 284 R++ +R EL+RI EE+P S + L +RA+QL+ DHST+V+EEV R Sbjct: 758 RESLVRVELDRISEESPMHNPNSHLSSNTKTKELTICKLKMRAVQLSTDHSTSVEEEVSR 817
Query: 285 IKSEHPDDEKSIFNERVKGQLKVTRAFCAGFLKSPRWNDALLEMFRVDYVGTAPYVTCIP 464 I++EHPDD +S+FN+RVKGQLKVTRAF AGFLK P++ND LLEMFR+DYVGT+ Y++C P Sbjct: 818 IRAEHPDDPQSVFNDRVKGQLKVTRAFGAGFLKKPKFNDILLEMFRIDYVGTSSYISCNP 877
Query: 465 AIHHHSLGPNDRFLVLSSDGLYQYLSNEQVVSHVEWFMENYPDGDPAQYLIEELLFRAAE 644 A+ HH L NDRFLVLSSDGLYQY SN++VVSHV WFMEN P+GDPAQYL+ ELL RAA+ Sbjct: 878 AVLHHRLCSNDRFLVLSSDGLYQYFSNDEVVSHVAWFMENVPEGDPAQYLVAELLCRAAK 937
Query: 645 KAGMDF 662 K GMDF Sbjct: 938 KNGMDF 943
>tr|A2XH85|A2XH85_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11759 PE=4 SV=1 Length = 978
Score = 239 bits (610), Expect = 1e-61 Identities = 116/186 (62%), Positives = 145/186 (77%) Frame = +3
Query: 105 RDTQLRQELERIMEETPSELETFESSHTCSSTGPPAVSLFLRALQLTADHSTNVDEEVLR 284 R++ +R EL+RI EE+P S + L +RA+QL+ DHST+V+EEV R Sbjct: 759 RESLVRVELDRISEESPMHNPNSHLSSNTKTKELTICKLKMRAVQLSTDHSTSVEEEVSR 818
Query: 285 IKSEHPDDEKSIFNERVKGQLKVTRAFCAGFLKSPRWNDALLEMFRVDYVGTAPYVTCIP 464 I++EHPDD +S+FN+RVKGQLKVTRAF AGFLK P++ND LLEMFR++YVGT+ Y++C P Sbjct: 819 IRAEHPDDPQSVFNDRVKGQLKVTRAFGAGFLKKPKFNDILLEMFRIEYVGTSSYISCNP 878
Query: 465 AIHHHSLGPNDRFLVLSSDGLYQYLSNEQVVSHVEWFMENYPDGDPAQYLIEELLFRAAE 644 A+ HH L NDRFLVLSSDGLYQY SN++VVSHV WFMEN P+GDPAQYL+ ELL RAA+ Sbjct: 879 AVLHHRLCSNDRFLVLSSDGLYQYFSNDEVVSHVAWFMENVPEGDPAQYLVAELLCRAAK 938
Query: 645 KAGMDF 662 K GMDF Sbjct: 939 KNGMDF 944
>tr|A7NZ18|A7NZ18_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024339001 PE=4 SV=1 Length = 616
Score = 238 bits (607), Expect = 2e-61 Identities = 118/192 (61%), Positives = 148/192 (77%) Frame = +3
Query: 87 DERIGLRDTQLRQELERIMEETPSELETFESSHTCSSTGPPAVSLFLRALQLTADHSTNV 266 D R L +LERI EET +LE ++ + S P +S F QLT DHST+V Sbjct: 398 DSRAVLAQKAEADDLERINEETLHDLEAMDNDN---SNMIPTLSAF----QLTVDHSTSV 450
Query: 267 DEEVLRIKSEHPDDEKSIFNERVKGQLKVTRAFCAGFLKSPRWNDALLEMFRVDYVGTAP 446 +EEV RIK+EHPDD ++ N+RVKG LKVTRAF AGFLK P+WN+ALLEMFR+DYVGT+P Sbjct: 451 EEEVRRIKNEHPDDACAVMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGTSP 510
Query: 447 YVTCIPAIHHHSLGPNDRFLVLSSDGLYQYLSNEQVVSHVEWFMENYPDGDPAQYLIEEL 626 Y++C+P+++HH LGP DRFL+LSSDGLYQYL+NE+ VS VE F+ PDGDPAQ+L+EE+ Sbjct: 511 YISCLPSLYHHRLGPEDRFLILSSDGLYQYLTNEEAVSEVELFIALSPDGDPAQHLVEEV 570
Query: 627 LFRAAEKAGMDF 662 LFRAA+KAGMDF Sbjct: 571 LFRAAKKAGMDF 582
>tr|A7PNM2|A7PNM2_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021315001 PE=4 SV=1 Length = 652
Score = 230 bits (587), Expect = 5e-59 Identities = 112/180 (62%), Positives = 144/180 (80%) Frame = +3
Query: 123 QELERIMEETPSELETFESSHTCSSTGPPAVSLFLRALQLTADHSTNVDEEVLRIKSEHP 302 Q+LERI EET +LE+F+ S G P+ L +LQLT DHSTNV EE RIK+EHP Sbjct: 446 QDLERINEETLHDLESFDGDQ---SYGLPS----LASLQLTMDHSTNVKEEFERIKNEHP 498
Query: 303 DDEKSIFNERVKGQLKVTRAFCAGFLKSPRWNDALLEMFRVDYVGTAPYVTCIPAIHHHS 482 DD+ ++ N+RVKG LKVTRAF AGFLK P+WN+ALLEMF+++YVGT+PY++C P+++HH Sbjct: 499 DDDSAVINDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFKIEYVGTSPYLSCSPSLYHHR 558
Query: 483 LGPNDRFLVLSSDGLYQYLSNEQVVSHVEWFMENYPDGDPAQYLIEELLFRAAEKAGMDF 662 LG DRFL+LSSDGLYQY +N++ VS VE F+ + P+GDPAQ+LIEE+LFRAA+KA MDF Sbjct: 559 LGLKDRFLILSSDGLYQYFTNQEAVSQVEMFLASSPEGDPAQHLIEEVLFRAAKKASMDF 618
>tr|B8Q8C1|B8Q8C1_ORYSI SKIP interacting protein 35 (Fragment) OS=Oryza sativa subsp. indica GN=SIP35 PE=2 SV=1 Length = 550
Score = 217 bits (553), Expect = 5e-55 Identities = 104/170 (61%), Positives = 132/170 (77%), Gaps = 2/170 (1%) Frame = +3
Query: 159 ELETFESSHTCSSTG--PPAVSLFLRALQLTADHSTNVDEEVLRIKSEHPDDEKSIFNER 332 +LE S G PP +S A+QLT+DHST+V+EEV+RI++EHPDD +I +R Sbjct: 351 DLEQISQGSFDGSVGDCPPCLS----AVQLTSDHSTSVEEEVIRIRNEHPDDPSAISKDR 406
Query: 333 VKGQLKVTRAFCAGFLKSPRWNDALLEMFRVDYVGTAPYVTCIPAIHHHSLGPNDRFLVL 512 VKG LKVTRAF AGFLK P+WNDALLEMFR+DYVG++PY++C P++ HH L DRFL+L Sbjct: 407 VKGSLKVTRAFGAGFLKQPKWNDALLEMFRIDYVGSSPYISCNPSLFHHKLSTRDRFLIL 466
Query: 513 SSDGLYQYLSNEQVVSHVEWFMENYPDGDPAQYLIEELLFRAAEKAGMDF 662 SSDGLYQY +NE+ V+ VE F+ P+GDPAQ+L+EE+LFRAA KAGMDF Sbjct: 467 SSDGLYQYFTNEEAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDF 516
>tr|A7PCA4|A7PCA4_VITVI Chromosome chr2 scaffold_11, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015783001 PE=4 SV=1 Length = 611
Score = 217 bits (553), Expect = 5e-55 Identities = 100/146 (68%), Positives = 127/146 (86%) Frame = +3
Query: 225 LRALQLTADHSTNVDEEVLRIKSEHPDDEKSIFNERVKGQLKVTRAFCAGFLKSPRWNDA 404 L ALQL+ DHST+++EEV+RIK+EHPDD + I N+RVKG+LKVTRAF AGFLK P+WND Sbjct: 429 LTALQLSTDHSTSIEEEVIRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDV 488
Query: 405 LLEMFRVDYVGTAPYVTCIPAIHHHSLGPNDRFLVLSSDGLYQYLSNEQVVSHVEWFMEN 584 LLEMFR +Y+GTAPY++C P++ +H L P D+FL+LSSDGLYQYLSN++VV VE FME Sbjct: 489 LLEMFRNEYIGTAPYISCSPSLCYHQLCPRDQFLILSSDGLYQYLSNQEVVCEVEKFMEK 548
Query: 585 YPDGDPAQYLIEELLFRAAEKAGMDF 662 +P+GDPAQ+LIEELL RAA+KAG++F Sbjct: 549 FPEGDPAQHLIEELLSRAAKKAGLNF 574
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