BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950449|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_K24, 5'
         (646 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P0C6R2|ARMC2_BOVIN Armadillo repeat-containing protein 2 OS=B...    32   2.2  
sp|O62246|COPE_CAEEL Coatomer subunit epsilon OS=Caenorhabditis ...    32   3.7  
sp|P51805|PLXA3_HUMAN Plexin-A3 OS=Homo sapiens GN=PLXNA3 PE=1 SV=2    31   4.9  

>sp|P0C6R2|ARMC2_BOVIN Armadillo repeat-containing protein 2 OS=Bos
           taurus GN=ARMC2 PE=4 SV=1
          Length = 865

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -1

Query: 400 ILSPDFRKKEAL--FYFSSSVVEGKSATMIDQLPHRQQDIRSRRPNTLAEDQMRL 242
           +LSP+ +K E L  FY  S   +  SA ++ +  +  + +R++RP T  EDQ +L
Sbjct: 1   MLSPNDKKLEKLDPFYLPSLSKQKTSAEIVSEARNALRTVRTQRPFTPREDQRKL 55


>sp|O62246|COPE_CAEEL Coatomer subunit epsilon OS=Caenorhabditis
           elegans GN=F45G2.4 PE=1 SV=1
          Length = 292

 Score = 31.6 bits (70), Expect = 3.7
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = +3

Query: 453 AATLMNEARRSH----FVSRIEKYEAKVRHAKALMKEQKGAMAVGEQKR 587
           AAT++NEA  S      VSR E  EA+      L+K  K  +A+GE K+
Sbjct: 109 AATILNEADLSQDAFRAVSRFEGLEARASKVFILIKMNKRKLAIGEVKK 157


>sp|P51805|PLXA3_HUMAN Plexin-A3 OS=Homo sapiens GN=PLXNA3 PE=1 SV=2
          Length = 1871

 Score = 31.2 bits (69), Expect = 4.9
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -2

Query: 177 RLSIYVCVSERSCLGRRVLKADPQLHKTWNPRSTGYGDGELALCVREHACGLGRYCP 7
           R  +Y C ++R   G   LKADP+ +  W              C+ EH C L  +CP
Sbjct: 780 RALLYKCWAQRPSCGL-CLKADPRFNCGW--------------CISEHRCQLRTHCP 821

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950449|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_K24, 5'
         (646 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8MN43|Q8MN43_DICDI Similar to Dictyostelium discoideum (Slim...    35   3.9  
tr|B7R129|B7R129_9EURY Membrane protein OS=Thermococcus sp. AM4 ...    35   5.1  
tr|Q9UYE4|Q9UYE4_PYRAB Stomatin-like protein OS=Pyrococcus abyss...    34   8.8  
tr|O58205|O58205_PYRHO 298aa long hypothetical membrane protein ...    34   8.8  

>tr|Q8MN43|Q8MN43_DICDI Similar to Dictyostelium discoideum (Slime
           mold). Endoglucanase (Endo-1,4-beta-glucanase) (Spore
           germination protein 270-6) (Cellulase) (Putative
           uncharacterized protein) OS=Dictyostelium discoideum
           GN=DDB_0169269 PE=4 SV=1
          Length = 464

 Score = 35.0 bits (79), Expect = 3.9
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
 Frame = +2

Query: 59  SPSP*PVDLGFQVLWSWGSAFRTRRPRQERSLTHT*IDSRTPTHT---SQNSSRKQTGVG 229
           +P+P       Q      S  +T  P Q ++ T T   + TPT T   ++NSS   T +G
Sbjct: 333 TPTPTQTQAPTQTPTQTPSPTQTPSPTQTQTQTSTPTPTETPTETPNSNENSSSSSTLIG 392

Query: 230 NAGTKTHLVFR*SVGSSRSD 289
           N+ T + L    S  SS SD
Sbjct: 393 NSSTNSELQSSESNDSSTSD 412


>tr|B7R129|B7R129_9EURY Membrane protein OS=Thermococcus sp. AM4
           GN=TAM4_473 PE=4 SV=1
          Length = 315

 Score = 34.7 bits (78), Expect = 5.1
 Identities = 26/76 (34%), Positives = 39/76 (51%)
 Frame = +3

Query: 417 MAASMESSGQTRAATLMNEARRSHFVSRIEKYEAKVRHAKALMKEQKGAMAVGEQKRTIL 596
           MA  M +  + RA  L+ E ++          EA +R A+   K+     A GE++R IL
Sbjct: 174 MAKQMTAEREKRAMILLAEGKK----------EAAIREAEG-QKQAAILKAEGEKQRQIL 222

Query: 597 NAEGQHIAMSKEMEAV 644
            AEGQ  A+ K +EA+
Sbjct: 223 IAEGQAQAIKKVLEAL 238


>tr|Q9UYE4|Q9UYE4_PYRAB Stomatin-like protein OS=Pyrococcus abyssi
           GN=PYRAB15640 PE=4 SV=1
          Length = 299

 Score = 33.9 bits (76), Expect = 8.8
 Identities = 26/76 (34%), Positives = 39/76 (51%)
 Frame = +3

Query: 417 MAASMESSGQTRAATLMNEARRSHFVSRIEKYEAKVRHAKALMKEQKGAMAVGEQKRTIL 596
           MA  M +  + RA  L+ E ++          EA +R A+   K+     A GE++R IL
Sbjct: 176 MAKQMTAEREKRAMILIAEGKK----------EAAIREAEG-QKQAAILKAEGEKQRQIL 224

Query: 597 NAEGQHIAMSKEMEAV 644
            AEGQ  A+ K +EA+
Sbjct: 225 IAEGQAEAIRKVLEAL 240


>tr|O58205|O58205_PYRHO 298aa long hypothetical membrane protein
           OS=Pyrococcus horikoshii GN=PH0470 PE=4 SV=1
          Length = 298

 Score = 33.9 bits (76), Expect = 8.8
 Identities = 26/76 (34%), Positives = 39/76 (51%)
 Frame = +3

Query: 417 MAASMESSGQTRAATLMNEARRSHFVSRIEKYEAKVRHAKALMKEQKGAMAVGEQKRTIL 596
           MA  M +  + RA  L+ E ++          EA +R A+   K+     A GE++R IL
Sbjct: 179 MAKQMTAEREKRAMILIAEGKK----------EAAIREAEG-QKQAAILKAEGEKQRQIL 227

Query: 597 NAEGQHIAMSKEMEAV 644
            AEGQ  A+ K +EA+
Sbjct: 228 IAEGQAEAIRKVLEAL 243