DK950466 |
Clone id |
TST38A01NGRL0008_L17 |
Library |
TST38 |
Length |
674 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_L17. 5' end sequence. |
Accession |
DK950466 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL597Contig1 |
Sequence |
GCAGGATGGGAGATCTATAATGAGGTAAGCTTATGAAGTCGACTAGCTGACAAGGAGGAA CGGGAAGGGGGGTTTGGGGACTCTTGAAGGTAACCCATGGCATCATCATCTGTAGAGTCG GAGCAGGATCCAGAGCCTGATGAGCCTACATTCCGATTCGATCAAAACAATACGTCATCT CAGAGTCTTCTCAGTGGAGGTGGTTCAGGTTATGAAAGCCAATATGGAAGCTTGTTTGGA AGTAGGTTCAGTTTAACAGATGGATCTGGGATCTTCATATCGTCACTTGCCTTGACTATC ATTATTTCAGCAATTGCTGTTGTAGGCATTGTCCTTGTTGCAGCGATAATCACGCTTGCA GTGATGCTATCGTCTTGTGGGCAAAACTCGACTGTGAATGTACAGTTTAAAAGGTCTGCT GATTTCTGCTCCAGCTTTCGCTTGAACATTGAACTAAACAACATGCAAGGAAGGGCACTT CCTGGAACATGTGATGCAGAGATCTTTGAGTATGTTCATGGGGGGCAATACATAAAGGAT GTGGAAATGGCAGTGAACTCTGCCCGACATTACCTAAAGAGCTTGGTGCTGGAAGACAAT CAGAGTTTTGGAGTTATTCTGGACATCGATGAGACAGCTCTCTCAAATGTTTTTCTATAC CAGAATGGTGGTTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P15490 |
Definition |
sp|P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max |
Align length |
83 |
Score (bit) |
49.3 |
E-value |
2.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9ST51 |
Definition |
tr|A9ST51|A9ST51_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
86 |
Score (bit) |
74.3 |
E-value |
6.0e-12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950466|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_L17, 5' (674 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9ST51|A9ST51_PHYPA Predicted protein OS=Physcomitrella paten... 74 6e-12 tr|A9TX97|A9TX97_PHYPA Predicted protein OS=Physcomitrella paten... 73 1e-11 tr|A5C9Z6|A5C9Z6_VITVI Putative uncharacterized protein (Chromos... 65 4e-09 tr|A9T054|A9T054_PHYPA Predicted protein OS=Physcomitrella paten... 65 5e-09 tr|Q9ZVI2|Q9ZVI2_ARATH Putative acid phosphatase OS=Arabidopsis ... 62 4e-08 tr|A2Y182|A2Y182_ORYSI Putative uncharacterized protein OS=Oryza... 61 6e-08 tr|Q9M0F4|Q9M0F4_ARATH Acid phosphatase-like protein (At4g29270)... 59 2e-07 tr|Q9LG77|Q9LG77_ORYSJ cDNA clone:006-301-D10, full insert seque... 59 2e-07 tr|A9TWQ1|A9TWQ1_PHYPA Predicted protein OS=Physcomitrella paten... 59 2e-07 tr|A2ZQ66|A2ZQ66_ORYSJ Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|A2WLL0|A2WLL0_ORYSI Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|Q6QWF7|Q6QWF7_GLYTO Vegetative storage protein OS=Glycine tom... 57 8e-07 tr|Q6QWF8|Q6QWF8_9FABA Vegetative storage protein OS=Glycine fal... 56 2e-06 tr|A9PBL1|A9PBL1_POPTR Putative uncharacterized protein OS=Popul... 55 3e-06 tr|Q60DS8|Q60DS8_ORYSJ Os05g0191500 protein OS=Oryza sativa subs... 54 1e-05 tr|Q60DS7|Q60DS7_ORYSJ cDNA clone:006-205-F04, full insert seque... 54 1e-05 tr|Q60DS6|Q60DS6_ORYSJ cDNA clone:J013082K18, full insert sequen... 54 1e-05 tr|A3B0R4|A3B0R4_ORYSJ Putative uncharacterized protein OS=Oryza... 54 1e-05 tr|Q60D99|Q60D99_ORYSJ Os05g0189900 protein OS=Oryza sativa subs... 53 2e-05 tr|Q9FNC4|Q9FNC4_ARATH Vegetative storage protein-like OS=Arabid... 53 2e-05 tr|Q8LC74|Q8LC74_ARATH Vegetative storage protein-like OS=Arabid... 53 2e-05 tr|Q10LW6|Q10LW6_ORYSJ Plant acid phosphatase family protein, ex... 53 2e-05 tr|Q0DS57|Q0DS57_ORYSJ Os03g0332500 protein OS=Oryza sativa subs... 53 2e-05 tr|B7FAG4|B7FAG4_ORYSJ cDNA, clone: J100071I16, full insert sequ... 53 2e-05 tr|A3AHM0|A3AHM0_ORYSJ Putative uncharacterized protein OS=Oryza... 53 2e-05 tr|A2XGC0|A2XGC0_ORYSI Putative uncharacterized protein OS=Oryza... 53 2e-05 tr|Q7XHW6|Q7XHW6_ORYSJ Os07g0681200 protein OS=Oryza sativa subs... 52 3e-05 tr|B7FIP7|B7FIP7_MEDTR Putative uncharacterized protein OS=Medic... 52 3e-05 tr|A2YQ00|A2YQ00_ORYSI Putative uncharacterized protein OS=Oryza... 52 3e-05 tr|Q9M4D6|Q9M4D6_HORVU Putative acid phosphatase OS=Hordeum vulg... 52 4e-05
>tr|A9ST51|A9ST51_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_134967 PE=4 SV=1 Length = 228
Score = 74.3 bits (181), Expect = 6e-12 Identities = 36/86 (41%), Positives = 54/86 (62%) Frame = +1
Query: 403 QFKRSADFCSSFRLNIELNNMQGRALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYLKS 582 Q K ++ C+SF N E+NN+QG LP C+ + YV+ GQY D +A+ +AR YL + Sbjct: 6 QKKPLSNACASFAFNTEMNNLQGYLLPQECEGYVAGYVNSGQYHSDFAVAIEAARTYLNT 65
Query: 583 LVLEDNQSFGVILDIDETALSNVFLY 660 + + + ++LDIDETALSN+ Y Sbjct: 66 IEADQDGKDLIVLDIDETALSNMPYY 91
>tr|A9TX97|A9TX97_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_152209 PE=4 SV=1 Length = 225
Score = 73.2 bits (178), Expect = 1e-11 Identities = 37/86 (43%), Positives = 53/86 (61%) Frame = +1
Query: 403 QFKRSADFCSSFRLNIELNNMQGRALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYLKS 582 Q K ++ C+SF LN E NN+QG LP C+ + YV GQY D +AV +AR YL + Sbjct: 6 QKKPVSNSCASFSLNAETNNLQGYLLPQECEGFVAGYVGSGQYYSDFAVAVEAARTYLNA 65
Query: 583 LVLEDNQSFGVILDIDETALSNVFLY 660 + ++ ++LDIDET+LSN+ Y Sbjct: 66 IQANEDGKDLIVLDIDETSLSNMPYY 91
>tr|A5C9Z6|A5C9Z6_VITVI Putative uncharacterized protein (Chromosome chr8 scaffold_68, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00033659001 PE=4 SV=1 Length = 251
Score = 65.1 bits (157), Expect = 4e-09 Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 1/81 (1%) Frame = +1
Query: 424 FCSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYLKSLVLEDN 600 +C S+R+++E NNM G R +P C I Y+ GGQY +D+ + Y+K +VL D+ Sbjct: 37 YCLSWRMSVEANNMAGWRTVPMQCLPYIQGYMIGGQYDRDMAFIADQILSYVKGIVLSDD 96
Query: 601 QSFGVILDIDETALSNVFLYQ 663 ILD+D+T +SN+F Y+ Sbjct: 97 GMDAWILDVDDTCISNLFYYK 117
>tr|A9T054|A9T054_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_138120 PE=4 SV=1 Length = 241
Score = 64.7 bits (156), Expect = 5e-09 Identities = 33/80 (41%), Positives = 48/80 (60%) Frame = +1
Query: 421 DFCSSFRLNIELNNMQGRALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYLKSLVLEDN 600 D C+SF N E+NN+Q LP C Y GQY D A+++AR YL S+V+E + Sbjct: 22 DVCASFARNAEVNNLQNWTLPQDCVTFSALYFDSGQYHADCAHAIDAARTYLASVVVESD 81
Query: 601 QSFGVILDIDETALSNVFLY 660 V+L++D+T LS++ LY Sbjct: 82 GQDMVVLELDDTMLSSISLY 101
>tr|Q9ZVI2|Q9ZVI2_ARATH Putative acid phosphatase OS=Arabidopsis thaliana GN=At2g38600 PE=2 SV=1 Length = 251
Score = 61.6 bits (148), Expect = 4e-08 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 1/83 (1%) Frame = +1
Query: 418 ADFCSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYLKSLVLE 594 A +C S+RL +E NN++ R +P C + Y+ GQY +DV++ V+ + YL ++L Sbjct: 35 ASYCLSWRLAVETNNVRAWRIVPLQCLRYVEVYMLAGQYDRDVQLTVDQIKVYLNEIILP 94
Query: 595 DNQSFGVILDIDETALSNVFLYQ 663 + ILD+D+T SNVF Y+ Sbjct: 95 GDGMDAWILDVDDTCFSNVFYYR 117
>tr|A2Y182|A2Y182_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18762 PE=4 SV=1 Length = 280
Score = 61.2 bits (147), Expect = 6e-08 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 1/88 (1%) Frame = +1
Query: 412 RSADFCSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYLKSLV 588 R+ C S+RL +E +N+ G R +P C+ + Y+ GG Y +D + V+ A Y +SL Sbjct: 59 RAGVACDSWRLGVEAHNVIGWRTVPARCEGYVGHYMLGGHYRRDSAVVVDEAIAYAESLQ 118
Query: 589 LEDNQSFGVILDIDETALSNVFLYQNGG 672 L N + DIDET+LSN+ Y N G Sbjct: 119 LAGNGKEIWVFDIDETSLSNLPYYANHG 146
>tr|Q9M0F4|Q9M0F4_ARATH Acid phosphatase-like protein (At4g29270) OS=Arabidopsis thaliana GN=At4g29270 PE=2 SV=1 Length = 256
Score = 59.3 bits (142), Expect = 2e-07 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Frame = +1
Query: 418 ADFCSSFRLNIELNNM-QGRALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYLKSLVLE 594 A +C S+RL E NN+ + +P C+ I Y++GGQ+ KD ++ + A Y K++ + Sbjct: 41 ASYCESWRLAAETNNVGPWKVIPSQCENYIKNYINGGQFDKDYDVVASYAIDYAKTVKVG 100
Query: 595 DNQSFGVILDIDETALSNVFLYQNGG 672 + + DIDET LSN+ Y+ G Sbjct: 101 GDGKDAWVFDIDETLLSNIEYYKANG 126
>tr|Q9LG77|Q9LG77_ORYSJ cDNA clone:006-301-D10, full insert sequence OS=Oryza sativa subsp. japonica GN=P0710E05.30 PE=2 SV=1 Length = 303
Score = 59.3 bits (142), Expect = 2e-07 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 5/89 (5%) Frame = +1
Query: 421 DFCSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYLKSLVLED 597 D+C S+R+ +E NN++G A P CD + Y+ G Y +D ++ V+ A Y ++ VL Sbjct: 57 DYCDSWRVGVEANNVRGWTAAPRKCDNYVENYMRGHHYRRDSKVVVDEAAAYAEAAVLSG 116
Query: 598 NQSFGV----ILDIDETALSNVFLYQNGG 672 + + + D+DETALS+V Y+ G Sbjct: 117 DPAADANATWVFDVDETALSHVKFYKKHG 145
>tr|A9TWQ1|A9TWQ1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_151925 PE=4 SV=1 Length = 224
Score = 59.3 bits (142), Expect = 2e-07 Identities = 28/75 (37%), Positives = 48/75 (64%) Frame = +1
Query: 427 CSSFRLNIELNNMQGRALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYLKSLVLEDNQS 606 C+SF L+ E+ N++ LP C Y+ GQY D +A+++AR YL+S+V+E + Sbjct: 18 CASFALSAEVYNLRNWTLPQDCITNAEIYIGSGQYYVDFALAIDAARTYLRSVVVESDGR 77
Query: 607 FGVILDIDETALSNV 651 ++LD+D+T LS++ Sbjct: 78 DLLVLDLDDTMLSSL 92
>tr|A2ZQ66|A2ZQ66_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_000688 PE=4 SV=1 Length = 227
Score = 59.3 bits (142), Expect = 2e-07 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 5/89 (5%) Frame = +1
Query: 421 DFCSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYLKSLVLED 597 D+C S+R+ +E NN++G A P CD + Y+ G Y +D ++ V+ A Y ++ VL Sbjct: 57 DYCDSWRVGVEANNVRGWTAAPRKCDNYVENYMRGHHYRRDSKVVVDEAAAYAEAAVLSG 116
Query: 598 NQSFGV----ILDIDETALSNVFLYQNGG 672 + + + D+DETALS+V Y+ G Sbjct: 117 DPAADANATWVFDVDETALSHVKFYKKHG 145
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