DK950471 |
Clone id |
TST38A01NGRL0008_L22 |
Library |
TST38 |
Length |
636 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_L22. 5' end sequence. |
Accession |
DK950471 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GTTAAAACTGAAACATTCCCTTTCCTCAGCGGATTTCAAAAATGCTTGCAAGGCTCGAGA AGCTGGTGGGATTTCTGGAGAAGGTGAGATCAACGATGATGAAGGTGGCATGAACATTGA GGCAGAAGAGATTATGGAAGATGAAAATGGTGGCAGCACTGATTCTGAGGATCGACCGCC AATGGTAAGGCAGTCTCGGTCAATAAAGAGAAAGAGGTTTACAAGACAGAGTGTTGCAGA AGATTTAAGCGCAAGTGAATTTGAGGAAGATGAGAGTGATGATGAGGTAAAACTTGAGAG TACGCCCAAAAAGGGCCGAATGAAGGCCCCGGAATTTGATGGTTGGGCGTCGAAGGAGCT GGGTGATCTCATACGGTCCTTGAAGGAGGATCCCAAAAAGCAATTACCCCTCTTTGGTGT AAAAAAGCTCTTGTGGCGCTATATAGATGATAACAAGCTGACCAACCCCAGACGAAGGGG ACAAATTCTTTGTGATGAAAGGTTGCGCAAGCTCTTTGGAAAGAAGCAGGTCGGCAGGTT TGAAATGATGAAGCTGATAGGTCTTCATGTTGCTTCACCAAATAAACTCCTGGTGTCCAA AGGTGGAGAGTCGCAATATAATGACAACGATGCGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q05024 |
Definition |
sp|Q05024|YM74_YEAST Uncharacterized protein YMR233W OS=Saccharomyces cerevisiae |
Align length |
73 |
Score (bit) |
59.7 |
E-value |
1.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TIU1 |
Definition |
tr|A9TIU1|A9TIU1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
86 |
Score (bit) |
85.5 |
E-value |
2.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950471|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_L22, 5' (636 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TIU1|A9TIU1_PHYPA Predicted protein (Fragment) OS=Physcomit... 86 2e-15 tr|A7QE25|A7QE25_VITVI Chromosome chr4 scaffold_83, whole genome... 81 6e-14 tr|A7P7X7|A7P7X7_VITVI Chromosome chr3 scaffold_8, whole genome ... 79 3e-13 tr|B8BDT6|B8BDT6_ORYSI Putative uncharacterized protein OS=Oryza... 77 9e-13 tr|A3C0W1|A3C0W1_ORYSJ Putative uncharacterized protein OS=Oryza... 77 9e-13 tr|Q9SIV4|Q9SIV4_ARATH Putative uncharacterized protein At2g1648... 75 3e-12 tr|A7QCA6|A7QCA6_VITVI Chromosome undetermined scaffold_77, whol... 74 7e-12 tr|A5B8L7|A5B8L7_VITVI Putative uncharacterized protein OS=Vitis... 74 7e-12 tr|Q9SD34|Q9SD34_ARATH Putative uncharacterized protein F24M12.1... 74 1e-11 tr|B8BHV0|B8BHV0_ORYSI Putative uncharacterized protein OS=Oryza... 72 2e-11 tr|Q7XCX5|Q7XCX5_ORYSJ Plus-3 domain containing protein, express... 72 3e-11 tr|Q0IWG0|Q0IWG0_ORYSJ Os10g0511800 protein OS=Oryza sativa subs... 72 3e-11 tr|A3C6E8|A3C6E8_ORYSJ Putative uncharacterized protein OS=Oryza... 72 3e-11 tr|B8ALH1|B8ALH1_ORYSI Putative uncharacterized protein OS=Oryza... 72 4e-11 tr|A3ADE2|A3ADE2_ORYSJ Putative uncharacterized protein OS=Oryza... 72 4e-11 tr|A7QR02|A7QR02_VITVI Chromosome undetermined scaffold_147, who... 69 2e-10 tr|B5RUD2|B5RUD2_DEBHA DEHA2F09856p OS=Debaryomyces hansenii GN=... 65 3e-09 tr|B5VQ01|B5VQ01_YEAS6 YMR233Wp-like protein OS=Saccharomyces ce... 60 1e-07 tr|B3LMC2|B3LMC2_YEAS1 Putative uncharacterized protein OS=Sacch... 60 1e-07 tr|A6ZMU6|A6ZMU6_YEAS7 Conserved protein OS=Saccharomyces cerevi... 60 1e-07 tr|B3LFA6|B3LFA6_ARATH At5g08430 OS=Arabidopsis thaliana PE=2 SV=1 59 3e-07 tr|Q9SL38|Q9SL38_ARATH Putative uncharacterized protein At2g1809... 58 4e-07 tr|Q94JX1|Q94JX1_ARATH Putative uncharacterized protein At2g1809... 58 4e-07 tr|Q9FFP4|Q9FFP4_ARATH Arabidopsis thaliana genomic DNA, chromos... 57 7e-07 tr|Q9XIB9|Q9XIB9_ARATH F13F21.4 protein OS=Arabidopsis thaliana ... 57 1e-06 tr|Q6L4Z0|Q6L4Z0_ORYSJ Putative uncharacterized protein OSJNBb00... 57 1e-06 tr|Q60DV4|Q60DV4_ORYSJ Os05g0420800 protein OS=Oryza sativa subs... 57 1e-06 tr|Q501B9|Q501B9_ARATH At1g49520 OS=Arabidopsis thaliana PE=2 SV=1 57 1e-06 tr|B8AYC6|B8AYC6_ORYSI Putative uncharacterized protein OS=Oryza... 57 1e-06 tr|A3B454|A3B454_ORYSJ Putative uncharacterized protein OS=Oryza... 57 1e-06
>tr|A9TIU1|A9TIU1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_146214 PE=4 SV=1 Length = 396
Score = 85.5 bits (210), Expect = 2e-15 Identities = 39/86 (45%), Positives = 58/86 (67%) Frame = +2
Query: 338 DGWASKELGDLIRSLKEDPKKQLPLFGVKKLLWRYIDDNKLTNPRRRGQILCDERLRKLF 517 + WAS+EL ++++KED K L F + KLLW YI NKL NP++ +I+CD++LR +F Sbjct: 132 EDWASRELKAFLKNMKEDVMKPLSRFAIHKLLWIYIKQNKLQNPKKMNEIICDQQLRLIF 191
Query: 518 GKKQVGRFEMMKLIGLHVASPNKLLV 595 K VG+FEM KL+ H P K+++ Sbjct: 192 EKDSVGQFEMFKLLNKHF--PTKIVL 215
>tr|A7QE25|A7QE25_VITVI Chromosome chr4 scaffold_83, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036834001 PE=4 SV=1 Length = 629
Score = 80.9 bits (198), Expect = 6e-14 Identities = 41/80 (51%), Positives = 51/80 (63%) Frame = +2
Query: 329 PEFDGWASKELGDLIRSLKEDPKKQLPLFGVKKLLWRYIDDNKLTNPRRRGQILCDERLR 508 PE WASKEL +L+ +K L F V+ LL YI N L +PRR+ QI+CD RLR Sbjct: 314 PEGTEWASKELLELVGHMKNGDTSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMRLR 373
Query: 509 KLFGKKQVGRFEMMKLIGLH 568 LFGK +VG FEM+KL+ H Sbjct: 374 NLFGKARVGHFEMLKLLESH 393
>tr|A7P7X7|A7P7X7_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035957001 PE=4 SV=1 Length = 888
Score = 78.6 bits (192), Expect = 3e-13 Identities = 40/86 (46%), Positives = 51/86 (59%) Frame = +2
Query: 311 KGRMKAPEFDGWASKELGDLIRSLKEDPKKQLPLFGVKKLLWRYIDDNKLTNPRRRGQIL 490 K K + WASKEL + + +K K F V+ LL YI NKL +PRR+ QI+ Sbjct: 306 KSLNKERDSPSWASKELLEFVMHMKNGDKSVTSQFDVQALLLEYIKRNKLRDPRRKSQII 365
Query: 491 CDERLRKLFGKKQVGRFEMMKLIGLH 568 CD RL LFGK +VG FEM+KL+ H Sbjct: 366 CDSRLEYLFGKPRVGHFEMLKLLESH 391
>tr|B8BDT6|B8BDT6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32136 PE=4 SV=1 Length = 1764
Score = 77.0 bits (188), Expect = 9e-13 Identities = 42/99 (42%), Positives = 57/99 (57%) Frame = +2
Query: 332 EFDGWASKELGDLIRSLKEDPKKQLPLFGVKKLLWRYIDDNKLTNPRRRGQILCDERLRK 511 E WASKEL D + ++K K L F V+ LL YI L +PRR+ QI+CD L+ Sbjct: 677 EETSWASKELLDFVANMKNGDKSVLSQFEVQSLLLDYIKRENLRDPRRKSQIICDSMLKS 736
Query: 512 LFGKKQVGRFEMMKLIGLHVASPNKLLVSKGGESQYNDN 628 LFGK +VG FEM+KL+ H L+S+ + +DN Sbjct: 737 LFGKARVGHFEMLKLLESH------FLMSEVSPVEIDDN 769
>tr|A3C0W1|A3C0W1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028933 PE=4 SV=1 Length = 1777
Score = 77.0 bits (188), Expect = 9e-13 Identities = 42/99 (42%), Positives = 57/99 (57%) Frame = +2
Query: 332 EFDGWASKELGDLIRSLKEDPKKQLPLFGVKKLLWRYIDDNKLTNPRRRGQILCDERLRK 511 E WASKEL D + ++K K L F V+ LL YI L +PRR+ QI+CD L+ Sbjct: 672 EETSWASKELLDFVANMKNGDKSVLSQFEVQSLLLDYIKRENLRDPRRKSQIICDSMLKS 731
Query: 512 LFGKKQVGRFEMMKLIGLHVASPNKLLVSKGGESQYNDN 628 LFGK +VG FEM+KL+ H L+S+ + +DN Sbjct: 732 LFGKARVGHFEMLKLLESH------FLMSEVSPVEIDDN 764
>tr|Q9SIV4|Q9SIV4_ARATH Putative uncharacterized protein At2g16480 OS=Arabidopsis thaliana GN=At2g16480 PE=2 SV=1 Length = 383
Score = 75.1 bits (183), Expect = 3e-12 Identities = 35/75 (46%), Positives = 48/75 (64%) Frame = +2
Query: 344 WASKELGDLIRSLKEDPKKQLPLFGVKKLLWRYIDDNKLTNPRRRGQILCDERLRKLFGK 523 WASKEL DL+ ++ + LP+ V+ LL YI L +PRR+ Q++CD RL+ LFGK Sbjct: 145 WASKELLDLVVHMRRGDRSFLPMLEVQTLLLAYIKRYNLRDPRRKSQVICDSRLQNLFGK 204
Query: 524 KQVGRFEMMKLIGLH 568 VG FEM+ L+ H Sbjct: 205 SHVGHFEMLNLLDSH 219
>tr|A7QCA6|A7QCA6_VITVI Chromosome undetermined scaffold_77, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035317001 PE=4 SV=1 Length = 431
Score = 73.9 bits (180), Expect = 7e-12 Identities = 39/115 (33%), Positives = 70/115 (60%) Frame = +2
Query: 287 VKLESTPKKGRMKAPEFDGWASKELGDLIRSLKEDPKKQLPLFGVKKLLWRYIDDNKLTN 466 VK ++TP K EF GW SK L + + S+ +D ++L + V ++ RY++DN L + Sbjct: 211 VKGKATPLKR-----EFIGWGSKVLIEFLASIGQDTTQKLSQYDVTSIISRYVNDNNLLH 265
Query: 467 PRRRGQILCDERLRKLFGKKQVGRFEMMKLIGLHVASPNKLLVSKGGESQYNDND 631 P+++ ++LCDERLR + G+K V + ++ ++ H+A L S+ E++Y+ D Sbjct: 266 PQKKRKVLCDERLRPVLGRKSVNKNKIYDIVEGHLA--ENLEESEDDEARYSSED 318
>tr|A5B8L7|A5B8L7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042083 PE=4 SV=1 Length = 1832
Score = 73.9 bits (180), Expect = 7e-12 Identities = 39/115 (33%), Positives = 70/115 (60%) Frame = +2
Query: 287 VKLESTPKKGRMKAPEFDGWASKELGDLIRSLKEDPKKQLPLFGVKKLLWRYIDDNKLTN 466 VK ++TP K EF GW SK L + + S+ +D ++L + V ++ RY++DN L + Sbjct: 162 VKGKATPLKR-----EFIGWGSKVLIEFLASIGQDTTQKLSQYDVTSIISRYVNDNNLLH 216
Query: 467 PRRRGQILCDERLRKLFGKKQVGRFEMMKLIGLHVASPNKLLVSKGGESQYNDND 631 P+++ ++LCDERLR + G+K V + ++ ++ H+A L S+ E++Y+ D Sbjct: 217 PQKKRKVLCDERLRPVLGRKSVNKNKIYDIVEGHLA--ENLEZSEDDEARYSSED 269
>tr|Q9SD34|Q9SD34_ARATH Putative uncharacterized protein F24M12.160 OS=Arabidopsis thaliana GN=F24M12.160 PE=4 SV=1 Length = 1247
Score = 73.6 bits (179), Expect = 1e-11 Identities = 38/88 (43%), Positives = 52/88 (59%) Frame = +2
Query: 323 KAPEFDGWASKELGDLIRSLKEDPKKQLPLFGVKKLLWRYIDDNKLTNPRRRGQILCDER 502 KAP WA+KEL + + +K L F V+ LL YI L +P ++ Q+LCD+ Sbjct: 267 KAPGDTSWATKELLEFVSFMKNGDTSVLSQFDVQGLLLDYIKKKNLRDPLQKSQVLCDQM 326
Query: 503 LRKLFGKKQVGRFEMMKLIGLHVASPNK 586 L KLFGK++VG FEM+KL+ HV K Sbjct: 327 LVKLFGKQRVGHFEMLKLLESHVLIQEK 354
>tr|B8BHV0|B8BHV0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34293 PE=4 SV=1 Length = 1681
Score = 72.4 bits (176), Expect = 2e-11 Identities = 58/192 (30%), Positives = 82/192 (42%), Gaps = 3/192 (1%) Frame = +2
Query: 2 LKLKHSLSSADFKNACKAREAGGISGEGEINDDEGGMNIEAEEIMEDENGGSTDSEDRPP 181 LK KHSL+ + NA S E D + ++ +G S Sbjct: 184 LKGKHSLTLEELVNAKSCWTVRSTSARREKEDSSNDLYDANFDLDASSDGASRKRR---- 239
Query: 182 MVRQSRSIKRKRFTRQSVAXXXXXXXXXXXXXXXXVKLESTPKKGRMKAPEFDG---WAS 352 R S S KR R + + A ES PK+ + + F G WAS Sbjct: 240 --RNSFSGKRGRKRQNNGA-------------------ESLPKRVQNEGMTFIGDTQWAS 278
Query: 353 KELGDLIRSLKEDPKKQLPLFGVKKLLWRYIDDNKLTNPRRRGQILCDERLRKLFGKKQV 532 EL + I ++ + F V+ LL Y+ L +PRR+ QI+CD RL LF K +V Sbjct: 279 SELLEFIGHMRNGDISYISQFDVQILLLEYVKQKNLRDPRRKSQIICDARLANLFRKPRV 338
Query: 533 GRFEMMKLIGLH 568 G FEM+KL+ +H Sbjct: 339 GHFEMLKLLEMH 350
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