DK950475 |
Clone id |
TST38A01NGRL0008_M02 |
Library |
TST38 |
Length |
684 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_M02. 5' end sequence. |
Accession |
DK950475 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
AGGTCGAACACGCACACTGGCAACCTTCAAAACAGTGATGTCAAGCTCGTTTGTCTAGAC AGAGTGACGGATACGACGTATTTAGGTCACAAGATGAGCTTGGCCCTAGTTCAAGCGTAT TCGTCAGAGGAGGAAGTGCAGGAGAAATTCTCCGACAGTGAGTCTGAAGAGAAAGAAAAT GAAGAACATGGTGAAGGACGATCACCAAGTGTAGTTCAAGGGGAGACATCGGACGACTAC TCACATTTTGATGGCCCCCATCTGCCCTCATCTCTGCCATCAGCAGCTGCCGTCTTCTCA GAGGTGACGGGACCACCGGAGTTTTTAAAAGATACAGTAGGCTCTGGAGGTGGTAACCAG GCTCGTTCGAATCTTCGAAAACTGCCTTATGGCTCCAAACTGGCAGCTTCGCGTACTCGA AAAGAACTTCCTGCTGGTGCGGTTGTGGAGGCAAAGCCACAGGCAGGTGCTGTAATAGAT CAAGGCAATCAGGCAACCAAAGAGGAGGCTCGGAAGCCACCTGAAGATGCTGCAAAACTC CTTGGGGTGTGCGTGCAGTGCAGTGTTCCTAAAACCTATTCAGCTGCTAAAGAAGGTCTG GTTTGCCCTATTTGCAAGGACCGTCCAATGAGTATTGATGATTTGAGCAAAAGAAGAGGA TCCAAAATGAAGGACAAAGAACGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8R4I1 |
Definition |
sp|Q8R4I1|ATX7_MOUSE Ataxin-7 OS=Mus musculus |
Align length |
138 |
Score (bit) |
35.0 |
E-value |
0.37 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKS3 |
Definition |
tr|A9NKS3|A9NKS3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
235 |
Score (bit) |
110.0 |
E-value |
6.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950475|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_M02, 5' (684 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKS3|A9NKS3_PICSI Putative uncharacterized protein OS=Picea... 110 6e-23 tr|A5BES3|A5BES3_VITVI Putative uncharacterized protein OS=Vitis... 107 7e-22 tr|A7QGP5|A7QGP5_VITVI Chromosome chr12 scaffold_93, whole genom... 107 9e-22 tr|A9RWS4|A9RWS4_PHYPA Predicted protein OS=Physcomitrella paten... 104 6e-21 tr|Q6ZGP6|Q6ZGP6_ORYSJ Os02g0753200 protein OS=Oryza sativa subs... 102 2e-20 tr|B8AIS6|B8AIS6_ORYSI Putative uncharacterized protein OS=Oryza... 102 2e-20 tr|A3ABF7|A3ABF7_ORYSJ Putative uncharacterized protein OS=Oryza... 102 2e-20 tr|Q94C20|Q94C20_ARATH AT5g64160/MHJ24_14 (Putative uncharacteri... 98 6e-19 tr|B6TLD6|B6TLD6_MAIZE Putative uncharacterized protein OS=Zea m... 95 5e-18 tr|B8A212|B8A212_MAIZE Putative uncharacterized protein OS=Zea m... 92 4e-17 tr|A7QGM1|A7QGM1_VITVI Chromosome chr12 scaffold_93, whole genom... 67 8e-10 tr|A7QGP8|A7QGP8_VITVI Chromosome chr12 scaffold_93, whole genom... 67 1e-09 tr|A7QGQ0|A7QGQ0_VITVI Chromosome chr12 scaffold_93, whole genom... 60 1e-07 tr|Q9FMI4|Q9FMI4_ARATH Arabidopsis thaliana genomic DNA, chromos... 47 6e-07 tr|B8C8T1|B8C8T1_THAPS Predicted protein OS=Thalassiosira pseudo... 39 0.24 tr|A0EBM2|A0EBM2_PARTE Chromosome undetermined scaffold_88, whol... 39 0.40 tr|B2AAN4|B2AAN4_PODAN Predicted CDS Pa_1_4620 OS=Podospora anse... 37 0.91 tr|A9WII7|A9WII7_CHLAA VanW family protein OS=Chloroflexus auran... 37 1.2 tr|B2QRG4|B2QRG4_9CHLR VanW family protein OS=Chloroflexus sp. Y... 37 1.2 tr|O01264|O01264_CAEEL Protein T22A3.5, partially confirmed by t... 37 1.2 tr|B3MD30|B3MD30_DROAN GF12009 OS=Drosophila ananassae GN=GF1200... 37 1.5 tr|Q9KZE3|Q9KZE3_STRCO Alpha glucosidase OS=Streptomyces coelico... 36 2.0 tr|O86874|O86874_STRLI Alpha glucosidase OS=Streptomyces lividan... 36 2.0 tr|B2RQB7|B2RQB7_MOUSE Atxn7 protein OS=Mus musculus GN=Atxn7 PE... 36 2.0 tr|Q9X8R9|Q9X8R9_STRCO Putative membrane protein OS=Streptomyces... 36 2.0 tr|Q1QF49|Q1QF49_NITHX Replication protein C OS=Nitrobacter hamb... 36 2.0 tr|B4KS58|B4KS58_DROMO GI21124 OS=Drosophila mojavensis GN=GI211... 36 2.0 tr|B4X316|B4X316_9GAMM Putative uncharacterized protein OS=Alcan... 36 2.6 tr|P79770|P79770_CHICK Winged helix protein CWH-1 OS=Gallus gall... 35 4.5 tr|Q1IU97|Q1IU97_ACIBL Putative uncharacterized protein OS=Acido... 35 5.9
>tr|A9NKS3|A9NKS3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 248
Score = 110 bits (276), Expect = 6e-23 Identities = 89/235 (37%), Positives = 110/235 (46%), Gaps = 38/235 (16%) Frame = +1
Query: 94 MSLALVQAYSSEEEVQXXXXXXXXXXXXXXXXXXXXXPSVVQGETSDDY--SHFDGPHLP 267 MSLALVQ YSSEEE + E ++Y P P Sbjct: 1 MSLALVQGYSSEEEETPQEAFRTDSDEDSD-----------ENEKRNEYPKQKLSMPLQP 49
Query: 268 ---SSLPSAAAVFSEVTGPPEFLKDTVGSGGGNQARSNLRKLPYGSKLAAS--RTRKELP 432 S LPSA FSEVTGPPEFL ++ R + ++ +G AA RT+KE Sbjct: 50 TKGSLLPSAFDAFSEVTGPPEFLNNSASEP--IPTRPSEKRNSFGGWQAAKDPRTKKEPR 107
Query: 433 AGAVVEAKPQ------------AGAVIDQGNQA-----------------TKEEARKPPE 525 AG V+EAK Q AG + A T A PPE Sbjct: 108 AGIVLEAKAQLVGVHERVRSDVAGTIARSPATAMPPPKNVPSPTLDNVRKTPSAAMPPPE 167
Query: 526 DAAKLLGVCVQCSVPKTYSAAKEGLVCPICKDRPMS--IDDLSKRRGSKMKDKER 684 DAAKLL +C+QC VPKTYS A+EGLVCP+C DRP + K++GS +KDKE+ Sbjct: 168 DAAKLLRMCLQCGVPKTYSNAREGLVCPVCGDRPPGNPNHENEKKKGSTIKDKEK 222
>tr|A5BES3|A5BES3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032714 PE=4 SV=1 Length = 246
Score = 107 bits (267), Expect = 7e-22 Identities = 78/226 (34%), Positives = 111/226 (49%), Gaps = 29/226 (12%) Frame = +1
Query: 94 MSLALVQAYSSEEEVQXXXXXXXXXXXXXXXXXXXXXPSVVQGETSDDYSHFDGPHLPSS 273 MSLAL+Q YSS EE + S G+ HF S+ Sbjct: 1 MSLALIQGYSSAEEEENDRFSQNSSEEDDQNDVAYAPLSRPIGDKPS--FHFPTASSGSA 58
Query: 274 LPSAAAVFSEVTGPPEFLKDTVGSGGGNQARSNLRKLPYGSKLAASRTRKELPAGAVVEA 453 LPSA FSE++GPP+FL + V + R+ G K +R+ KELPAGAVV++ Sbjct: 59 LPSAFDAFSEISGPPDFLNNCVQEQASAEDVERQRRRHGGWK---NRSEKELPAGAVVKS 115
Query: 454 KPQAGAVID------QGNQATKEEARKPP---------------------EDAAKLLGVC 552 K Q + + +GN A K + P EDAA+LL +C Sbjct: 116 KAQLVGIHERVRSDIEGNLAPKSSVQPPKGSLSTTQGEGKRVATAANPNAEDAAELLRMC 175
Query: 553 VQCSVPKTYSAAKEGLVCPICKDRPM--SIDDLSKRRGSKMKDKER 684 +QC +PKTYS+A+ G+VCP C DRP+ + + K++GS +K+KE+ Sbjct: 176 MQCGIPKTYSSAR-GMVCPQCGDRPLEDANKETDKKKGSTIKEKEK 220
>tr|A7QGP5|A7QGP5_VITVI Chromosome chr12 scaffold_93, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038422001 PE=4 SV=1 Length = 231
Score = 107 bits (266), Expect = 9e-22 Identities = 76/211 (36%), Positives = 110/211 (52%), Gaps = 14/211 (6%) Frame = +1
Query: 94 MSLALVQAYSSEEEVQXXXXXXXXXXXXXXXXXXXXXPSVVQGETSDDYSHFDGPHLPSS 273 MSLAL+Q YSS EE + S G+ HF S+ Sbjct: 1 MSLALIQGYSSAEEEENDRFSQNSSEEDDQNDVAYAPLSRPIGDKPS--FHFPTASSGSA 58
Query: 274 LPSAAAVFSEVTGPPEFLKDTVGSGGGNQARSNLRKLPYGSKLAASRTRKELPAGAVVEA 453 LPSA FSE++GPP+FL + V + R+ G K +R+ KELPAGAVV++ Sbjct: 59 LPSAFDAFSEISGPPDFLNNCVQEQASAEDVERQRRRHGGWK---NRSEKELPAGAVVKS 115
Query: 454 KPQAGAVIDQGN-----QATKEEARKPP-------EDAAKLLGVCVQCSVPKTYSAAKEG 597 K Q + ++ Q K E ++ EDAA+LL +C+QC +PKTYS+A+ G Sbjct: 116 KAQLVGIHERVRSDIEVQPPKGEGKRVATAANPNAEDAAELLRMCMQCGIPKTYSSAR-G 174
Query: 598 LVCPICKDRPM--SIDDLSKRRGSKMKDKER 684 +VCP C DRP+ + + K++GS +K+KE+ Sbjct: 175 MVCPQCGDRPLEDANKETDKKKGSTIKEKEK 205
>tr|A9RWS4|A9RWS4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_161470 PE=4 SV=1 Length = 230
Score = 104 bits (259), Expect = 6e-21 Identities = 79/208 (37%), Positives = 104/208 (50%), Gaps = 12/208 (5%) Frame = +1
Query: 94 MSLALVQAYSS-EEEVQXXXXXXXXXXXXXXXXXXXXXPSVVQGETSDDYSHFDGPHLPS 270 MSL+LVQ Y S EEE PS + P S Sbjct: 1 MSLSLVQGYESPEEEDPRDYFTESDEEYPDDGFEEKETPSAKPSKLQK----IKPPPRTS 56
Query: 271 SLPSAAAVFSEVTGPPEFLKDTVGSGGGNQARSNLRKLPYGSKLAASRTRK--ELP-AGA 441 LP+A +F+EVTGPP+FLK+++ + S + + A + K +P A A Sbjct: 57 DLPTAFEMFTEVTGPPDFLKNSMITRPNGDLTS-MTPTDFSISYVAPKEPKPRHVPTAVA 115
Query: 442 VVEAKPQAGAVI-DQGNQATKEEARKP------PEDAAKLLGVCVQCSVPKTYSAAKEGL 600 VVEAKPQ V D GN + R P EDAA LL +C C VPKT+SAAKEG+ Sbjct: 116 VVEAKPQVSNVEQDTGNAGLTVKKRAPGAGLPPAEDAANLLRMCQNCGVPKTFSAAKEGM 175
Query: 601 VCPICKDRP-MSIDDLSKRRGSKMKDKE 681 VCP+C DRP ++ + +RG+K+KDKE Sbjct: 176 VCPLCNDRPKVASAEEKNKRGNKVKDKE 203
>tr|Q6ZGP6|Q6ZGP6_ORYSJ Os02g0753200 protein OS=Oryza sativa subsp. japonica GN=OJ1288_G09.18 PE=4 SV=1 Length = 249
Score = 102 bits (254), Expect = 2e-20 Identities = 62/153 (40%), Positives = 83/153 (54%), Gaps = 14/153 (9%) Frame = +1
Query: 268 SSLPSAAAVFSEVTGPPEFLKDTVGSGGGNQARSNLRKLPYGSKLAASRTRKELPAGAVV 447 S LPSA F+E++GPPEFL + V +A L L K K+ P GAVV Sbjct: 74 SLLPSALDAFAEISGPPEFLNNRVAEP--EEAVEALGVLDRRGKGGRGSDSKQPPPGAVV 131
Query: 448 EAKPQAGAVIDQGNQATKEE--------------ARKPPEDAAKLLGVCVQCSVPKTYSA 585 AKPQ A+ ++ + T A PEDAA LL +C+QC +PKTYS Sbjct: 132 VAKPQLVAIRERVSSGTNGANPPVSTEGKRIIGAANPGPEDAADLLRMCLQCGIPKTYSH 191
Query: 586 AKEGLVCPICKDRPMSIDDLSKRRGSKMKDKER 684 A+ G+VCP+C DRP + K++GS +KDKE+ Sbjct: 192 AR-GMVCPVCNDRPEQAREPEKKKGSTVKDKEK 223
>tr|B8AIS6|B8AIS6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08971 PE=4 SV=1 Length = 249
Score = 102 bits (254), Expect = 2e-20 Identities = 62/153 (40%), Positives = 83/153 (54%), Gaps = 14/153 (9%) Frame = +1
Query: 268 SSLPSAAAVFSEVTGPPEFLKDTVGSGGGNQARSNLRKLPYGSKLAASRTRKELPAGAVV 447 S LPSA F+E++GPPEFL + V +A L L K K+ P GAVV Sbjct: 74 SLLPSALDAFAEISGPPEFLNNRVAEP--EEAVEALGVLDRRGKGGRGSDSKQPPPGAVV 131
Query: 448 EAKPQAGAVIDQGNQATKEE--------------ARKPPEDAAKLLGVCVQCSVPKTYSA 585 AKPQ A+ ++ + T A PEDAA LL +C+QC +PKTYS Sbjct: 132 VAKPQLVAIRERVSSGTNGANPPVSTEGKRIIGAANPGPEDAADLLRMCLQCGIPKTYSH 191
Query: 586 AKEGLVCPICKDRPMSIDDLSKRRGSKMKDKER 684 A+ G+VCP+C DRP + K++GS +KDKE+ Sbjct: 192 AR-GMVCPVCNDRPEQAREPEKKKGSTVKDKEK 223
>tr|A3ABF7|A3ABF7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008129 PE=4 SV=1 Length = 257
Score = 102 bits (254), Expect = 2e-20 Identities = 62/153 (40%), Positives = 83/153 (54%), Gaps = 14/153 (9%) Frame = +1
Query: 268 SSLPSAAAVFSEVTGPPEFLKDTVGSGGGNQARSNLRKLPYGSKLAASRTRKELPAGAVV 447 S LPSA F+E++GPPEFL + V +A L L K K+ P GAVV Sbjct: 82 SLLPSALDAFAEISGPPEFLNNRVAEP--EEAVEALGVLDRRGKGGRGSDSKQPPPGAVV 139
Query: 448 EAKPQAGAVIDQGNQATKEE--------------ARKPPEDAAKLLGVCVQCSVPKTYSA 585 AKPQ A+ ++ + T A PEDAA LL +C+QC +PKTYS Sbjct: 140 VAKPQLVAIRERVSSGTNGANPPVSTEGKRIIGAANPGPEDAADLLRMCLQCGIPKTYSH 199
Query: 586 AKEGLVCPICKDRPMSIDDLSKRRGSKMKDKER 684 A+ G+VCP+C DRP + K++GS +KDKE+ Sbjct: 200 AR-GMVCPVCNDRPEQAREPEKKKGSTVKDKEK 231
>tr|Q94C20|Q94C20_ARATH AT5g64160/MHJ24_14 (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At5g64160 PE=2 SV=1 Length = 227
Score = 97.8 bits (242), Expect = 6e-19 Identities = 71/212 (33%), Positives = 107/212 (50%), Gaps = 15/212 (7%) Frame = +1
Query: 94 MSLALVQAYSSEEEVQXXXXXXXXXXXXXXXXXXXXXPSVVQGETSD--DYSHFDGPHLP 267 MSL L+Q YSS EE + V + E+S D+S Sbjct: 1 MSLTLLQGYSSAEEEEAEERAFGDYDNSDEDGDN----DVRRYESSSVFDFSASASSAKN 56
Query: 268 SSLPSAAAVFSEVTGPPEFLKDTVGSGGGNQARSNLRKLPYGSKLAASRTRKELPAGAVV 447 + LPSA VFS+++GPPEFL + + AR + ++++ + +K P G V+ Sbjct: 57 AGLPSADDVFSQISGPPEFLNNRTEADNEASARD----AEHANRISRKK-KKVKPKGVVM 111
Query: 448 EAKPQAGAVIDQ-------------GNQATKEEARKPPEDAAKLLGVCVQCSVPKTYSAA 588 EAKPQ + ++ G + E++A LL +CVQC VPKTY++A Sbjct: 112 EAKPQLVGIHERVRNDIDAPPSSESGEKRISTATNPNAEESADLLRMCVQCGVPKTYTSA 171
Query: 589 KEGLVCPICKDRPMSIDDLSKRRGSKMKDKER 684 + G+VCPIC DRP+ D +K++GS +KDKE+ Sbjct: 172 R-GMVCPICGDRPLPDVD-AKKKGSTIKDKEK 201
>tr|B6TLD6|B6TLD6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 248
Score = 94.7 bits (234), Expect = 5e-18 Identities = 66/158 (41%), Positives = 85/158 (53%), Gaps = 19/158 (12%) Frame = +1
Query: 268 SSLPSAAAVFSEVTGPPEFLKDTVGSGG-GNQARSNL-RKLPYGSKLAASRTRKELPAGA 441 S LPSA F++V+GPP+FL+ V G +A L R+ GSK + P GA Sbjct: 74 SLLPSALEAFADVSGPPDFLRHRVAEPEEGTEALGVLDRRGKEGSK--------QPPPGA 125
Query: 442 VVEAKPQAGAV--------------IDQGNQATKE---EARKPPEDAAKLLGVCVQCSVP 570 VV AKPQ A+ + G+ K A PEDAA LL +C+QC VP Sbjct: 126 VVVAKPQIVAIRERVTTTGANPPGSVTSGSIDGKRVIGAANPRPEDAADLLRMCLQCGVP 185
Query: 571 KTYSAAKEGLVCPICKDRPMSIDDLSKRRGSKMKDKER 684 KTYS K G+VCP C DRPM + K++GS +KDKE+ Sbjct: 186 KTYSHGK-GMVCPQCGDRPMQTKEPEKKKGSTVKDKEK 222
>tr|B8A212|B8A212_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 248
Score = 91.7 bits (226), Expect = 4e-17 Identities = 65/158 (41%), Positives = 84/158 (53%), Gaps = 19/158 (12%) Frame = +1
Query: 268 SSLPSAAAVFSEVTGPPEFLKDTVGSGG-GNQARSNL-RKLPYGSKLAASRTRKELPAGA 441 S LPSA F++V+GPP+FL+ V G +A L R+ GSK + P GA Sbjct: 74 SLLPSALEAFADVSGPPDFLRHRVAEPEEGTEALGVLDRRGKEGSK--------QPPPGA 125
Query: 442 VVEAKPQAGAV--------------IDQGNQATKE---EARKPPEDAAKLLGVCVQCSVP 570 VV AKPQ A+ + G+ K A PEDAA LL +C+QC VP Sbjct: 126 VVVAKPQIVAIRERVTTTGANPPGSVTAGSIDGKRVIGAANPGPEDAADLLRMCLQCGVP 185
Query: 571 KTYSAAKEGLVCPICKDRPMSIDDLSKRRGSKMKDKER 684 KTYS K G+VCP C RPM + K++GS +KDKE+ Sbjct: 186 KTYSHGK-GMVCPQCGGRPMQTKEPEKKKGSTVKDKEK 222
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