DK950495 |
Clone id |
TST38A01NGRL0008_M22 |
Library |
TST38 |
Length |
687 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_M22. 5' end sequence. |
Accession |
DK950495 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL884Contig1 |
Sequence |
CGTTCGTTGGCGACGAAAGCAGAGACAGATATTGACCGAGGAGAGATTCAGATCTTGGAC ATTTTGGTATGCTCTCTGCAACCAAGCTCTTCTTGATGCGAAGTTATTAGTCCCATGCAT TGAGAGACATGGATGAGTCTTTGCCACCTGCTCCGCCGCCGCCCGTGCCACAAGAAGCTT CTTCTGGATGGGGTGGTGGCTGGGGGAACTGGGGTAGTTCTGCTTTTTCAGTTCTGTCCG GTATTCAGAAAGTGGCTGTCTCGGCAGCGGATGAGATAACCAAAAATGCAATAGCAGCTG CCAAAGATGCTGCTAAAGGAGTGGCGGAGCTGCAAGAGAATGTTACTGGCTCTCTCAAGC TGCAAGATCAAGGTGATGCTGAGGACGCATCACCACTTGTGGAGACAGCTGAGAGTGACA CTGAGCTTCCTCAAGACAAGCTAAGGAGTGCAGCCTTACAGAAGCTGGAAGAAGCTGGTC AAGATACCGCCTTGGGTCACGGTTTGAAAGCAATAGATACATCGGTGGAGAATCTAGCTT CTGGAGCATGGCAGGCATTCGGGACTGCTTGGAGGGGGAGTAGAAATTTTATACAAAAGC TAGAGAACTCAGCTGAGAGTCTTGCTGAAAGTATTCATAATCAAGGAAGCTTCAATTACA AGGCTGGAACATTTGCTCCGAGTCTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P55326 |
Definition |
sp|P55326|YZG1_CAEEL Uncharacterized protein F13E6.1 OS=Caenorhabditis elegans |
Align length |
75 |
Score (bit) |
34.7 |
E-value |
0.49 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LLI8 |
Definition |
tr|B8LLI8|B8LLI8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
155 |
Score (bit) |
114.0 |
E-value |
6.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950495|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_M22, 5' (687 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LLI8|B8LLI8_PICSI Putative uncharacterized protein OS=Picea... 114 6e-24 tr|A5AZC4|A5AZC4_VITVI Putative uncharacterized protein OS=Vitis... 114 6e-24 tr|Q84R31|Q84R31_ORYSJ Putative uncharacterized protein OSJNBb00... 88 6e-16 tr|B8AR51|B8AR51_ORYSI Putative uncharacterized protein OS=Oryza... 88 6e-16 tr|Q8L4R9|Q8L4R9_ARATH Putative uncharacterized protein At2g1586... 87 1e-15 tr|A9U3U9|A9U3U9_PHYPA Predicted protein OS=Physcomitrella paten... 85 5e-15 tr|A7P9B2|A7P9B2_VITVI Chromosome chr3 scaffold_8, whole genome ... 84 6e-15 tr|Q9XIL7|Q9XIL7_ARATH Putative uncharacterized protein At2g1586... 79 2e-13 tr|Q10D74|Q10D74_ORYSJ Os03g0737900 protein OS=Oryza sativa subs... 39 0.31 tr|A3AMH8|A3AMH8_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.31 tr|A8INH1|A8INH1_CHLRE Potential GTPase activation protein OS=Ch... 39 0.41 tr|A4CNX7|A4CNX7_9FLAO Putative uncharacterized protein OS=Robig... 36 2.0 tr|Q033M6|Q033M6_LACC3 Phosphotransferase system, mannitol-speci... 36 2.6 tr|B3WBT6|B3WBT6_LACCB Mannitol PTS, EIICB OS=Lactobacillus case... 36 2.6 tr|Q5USA3|Q5USA3_9MONO L protein OS=Avian metapneumovirus GN=L P... 35 4.5 tr|P87509|P87509_9MONO RNA-dependent RNA polymerase OS=Avian met... 35 4.5 tr|A3EYA8|A3EYA8_9VIRU Putative replicase OS=Curvularia thermal ... 35 4.5 tr|Q4C0S0|Q4C0S0_CROWT TPR repeat:TPR repeat OS=Crocosphaera wat... 35 4.5 tr|Q6MNV8|Q6MNV8_BDEBA Putative uncharacterized protein OS=Bdell... 34 7.6 tr|Q0RM17|Q0RM17_FRAAA Putative uncharacterized protein OS=Frank... 34 10.0
>tr|B8LLI8|B8LLI8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 502
Score = 114 bits (285), Expect = 6e-24 Identities = 71/155 (45%), Positives = 94/155 (60%) Frame = +3
Query: 222 AFSVLSGIQKVAVSAADEITXXXXXXXXXXXXXXXELQENVTGSLKLQDQGDAEDASPLV 401 AFSVLS +QK A AADEI E ++ +K +D+ +AE+ + + Sbjct: 24 AFSVLSDLQKAAAQAADEIARNASAVAKSAISDLQSADEPLSEPVK-EDETEAENVATQL 82
Query: 402 ETAESDTELPQDKLRSAALQKLEEAGQDTALGHGLKAIDTSVENLASGAWQAFGTAWRGS 581 E D E ++K R AAL +LE+A QDT LG GL+A D+SVE ASGAWQAFG A +G Sbjct: 83 EY---DNE--EEKRRKAALDRLEKASQDTFLGQGLRAFDSSVETFASGAWQAFGNALKGG 137
Query: 582 RNFIQKLENSAESLAESIHNQGSFNYKAGTFAPSL 686 N +QK+E+SA +LA+SI QG KA + APSL Sbjct: 138 TNLVQKIEHSAVNLADSI-QQGGLPAKASSLAPSL 171
>tr|A5AZC4|A5AZC4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013684 PE=4 SV=1 Length = 527
Score = 114 bits (285), Expect = 6e-24 Identities = 70/157 (44%), Positives = 92/157 (58%), Gaps = 4/157 (2%) Frame = +3
Query: 228 SVLSGIQKVAVSAADEITXXXXXXXXXXXXXXXELQENVTGSLKLQDQGDAEDASPLVET 407 S LS +QK A AA+EI+ + Q S +D+ + ++++ Sbjct: 40 SYLSDLQKAAAVAAEEISRNAVEAAKTAAKSITDAQNMDEDSESSKDEEEVDESA----- 94
Query: 408 AESDTELPQDKLRSAALQKLEEAGQDTALGH----GLKAIDTSVENLASGAWQAFGTAWR 575 E + DKLR +AL KLE+A +D+ LG GLK +D SVENLASGAWQA G+AW+ Sbjct: 95 TEDKNDHEDDKLRKSALDKLEKASEDSFLGQANVQGLKVLDNSVENLASGAWQALGSAWK 154
Query: 576 GSRNFIQKLENSAESLAESIHNQGSFNYKAGTFAPSL 686 GS NF+QKLENSA +LAESIH G AG+ APSL Sbjct: 155 GSSNFVQKLENSAVNLAESIHQGGL--PAAGSVAPSL 189
>tr|Q84R31|Q84R31_ORYSJ Putative uncharacterized protein OSJNBb0016H12.28 (Putative uncharacterized protein OSJNBa0057G07.23) OS=Oryza sativa subsp. japonica GN=OSJNBb0016H12.28 PE=4 SV=1 Length = 494
Score = 87.8 bits (216), Expect = 6e-16 Identities = 49/105 (46%), Positives = 64/105 (60%) Frame = +3
Query: 372 GDAEDASPLVETAESDTELPQDKLRSAALQKLEEAGQDTALGHGLKAIDTSVENLASGAW 551 GD E+ + AE E +D+ R AAL KLE A +D+ LG GLK D+SVE + +G W Sbjct: 67 GDGEEKEK-EKAAEGGGE--EDEQRKAALDKLENASEDSLLGQGLKVFDSSVETITTGTW 123
Query: 552 QAFGTAWRGSRNFIQKLENSAESLAESIHNQGSFNYKAGTFAPSL 686 QA G+AW+ +QKLE SA SLAE+I QG KA AP++ Sbjct: 124 QALGSAWKSGSLLVQKLETSASSLAETI-QQGELPAKASVIAPTI 167
>tr|B8AR51|B8AR51_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13438 PE=4 SV=1 Length = 494
Score = 87.8 bits (216), Expect = 6e-16 Identities = 49/105 (46%), Positives = 64/105 (60%) Frame = +3
Query: 372 GDAEDASPLVETAESDTELPQDKLRSAALQKLEEAGQDTALGHGLKAIDTSVENLASGAW 551 GD E+ + AE E +D+ R AAL KLE A +D+ LG GLK D+SVE + +G W Sbjct: 67 GDGEEKEK-EKAAEGGGE--EDERRKAALDKLENASEDSLLGQGLKVFDSSVETITTGTW 123
Query: 552 QAFGTAWRGSRNFIQKLENSAESLAESIHNQGSFNYKAGTFAPSL 686 QA G+AW+ +QKLE SA SLAE+I QG KA AP++ Sbjct: 124 QALGSAWKSGSLLVQKLETSASSLAETI-QQGELPAKASVIAPTI 167
>tr|Q8L4R9|Q8L4R9_ARATH Putative uncharacterized protein At2g15860 OS=Arabidopsis thaliana GN=At2g15860 PE=2 SV=1 Length = 512
Score = 86.7 bits (213), Expect = 1e-15 Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 4/158 (2%) Frame = +3
Query: 225 FSVLSGIQKVAVSAADEITXXXXXXXXXXXXXXXELQENVTGSLKLQDQGDAEDASPLVE 404 FSVLS +QK AA++I+ E+ E D+ A + Sbjct: 52 FSVLSDLQK----AAEDISRNAAAVAEKAAKSIAEMGE--------VDEDSESSAKEEEK 99
Query: 405 TAESDTELPQD----KLRSAALQKLEEAGQDTALGHGLKAIDTSVENLASGAWQAFGTAW 572 T E+DTE D KL+ +AL++LE A +++ L GLK D SVE+ SGAWQAFG A Sbjct: 100 TEEADTEQDSDDENAKLKKSALERLEGASEESLLSQGLKVFDDSVESFTSGAWQAFGNAL 159
Query: 573 RGSRNFIQKLENSAESLAESIHNQGSFNYKAGTFAPSL 686 +G + +QKLENS + QGS +AG+ APSL Sbjct: 160 KGGTSLVQKLENSVQ--------QGSSPREAGSGAPSL 189
>tr|A9U3U9|A9U3U9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_155740 PE=4 SV=1 Length = 413
Score = 84.7 bits (208), Expect = 5e-15 Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 3/98 (3%) Frame = +3
Query: 327 ELQENVTGSLKLQDQGDAE---DASPLVETAESDTELPQDKLRSAALQKLEEAGQDTALG 497 +LQ VT ++++ D + + D + +E+A+ +D R AAL KLE A QD+ LG Sbjct: 51 DLQHTVTDAVQVVDDEEVDALKDENKELESADPKESSEEDARRKAALTKLENASQDSFLG 110
Query: 498 HGLKAIDTSVENLASGAWQAFGTAWRGSRNFIQKLENS 611 GLK +D SV+NL +GAWQA G AW+ S N + KLEN+ Sbjct: 111 QGLKVLDDSVDNLTTGAWQALGNAWKESVNLVHKLENT 148
>tr|A7P9B2|A7P9B2_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036499001 PE=4 SV=1 Length = 1068
Score = 84.3 bits (207), Expect = 6e-15 Identities = 43/62 (69%), Positives = 49/62 (79%) Frame = +3
Query: 501 GLKAIDTSVENLASGAWQAFGTAWRGSRNFIQKLENSAESLAESIHNQGSFNYKAGTFAP 680 GLK +D SVENLASGAWQA G+AW+GS NF+QKLENSA +LAESIH G AG+ AP Sbjct: 682 GLKVLDNSVENLASGAWQALGSAWKGSSNFVQKLENSAVNLAESIHQGGL--PAAGSVAP 739
Query: 681 SL 686 SL Sbjct: 740 SL 741
>tr|Q9XIL7|Q9XIL7_ARATH Putative uncharacterized protein At2g15860 OS=Arabidopsis thaliana GN=At2g15860 PE=4 SV=1 Length = 539
Score = 79.3 bits (194), Expect = 2e-13 Identities = 58/173 (33%), Positives = 79/173 (45%), Gaps = 19/173 (10%) Frame = +3
Query: 225 FSVLSGIQKVAVSAADEITXXXXXXXXXXXXXXXELQENVTGSLKLQDQGDAEDASPLVE 404 FSVLS +QK A + I+ E + D+ A + Sbjct: 52 FSVLSDLQKAAEDISRNISDPKLMVELCMAAAVAEKAAKSIAEMGEVDEDSESSAKEEEK 111
Query: 405 TAESDTELPQD----KLRSAALQKLEEAGQDTALGH---------------GLKAIDTSV 527 T E+DTE D KL+ +AL++LE A +++ L GLK D SV Sbjct: 112 TEEADTEQDSDDENAKLKKSALERLEGASEESLLSQANVRIYKVSRSFIFQGLKVFDDSV 171
Query: 528 ENLASGAWQAFGTAWRGSRNFIQKLENSAESLAESIHNQGSFNYKAGTFAPSL 686 E+ SGAWQAFG A +G + +QKLENS + QGS +AG+ APSL Sbjct: 172 ESFTSGAWQAFGNALKGGTSLVQKLENSVQ--------QGSSPREAGSGAPSL 216
>tr|Q10D74|Q10D74_ORYSJ Os03g0737900 protein OS=Oryza sativa subsp. japonica GN=Os03g0737900 PE=4 SV=1 Length = 510
Score = 38.9 bits (89), Expect = 0.31 Identities = 40/123 (32%), Positives = 53/123 (43%), Gaps = 18/123 (14%) Frame = +3
Query: 372 GDAEDASPLVETAESDTELPQDKLRSAALQKLEEAGQDTALGHGLKAIDTSVENLASGAW 551 GD E+ + AE E +D+ R AAL KLE A +D+ LG + T+ S A Sbjct: 67 GDGEEKEK-EKAAEGGGE--EDEQRKAALDKLENASEDSLLGQA--SCTTTFAVPFSSAM 121
Query: 552 QAFGTAWRGSRNFIQ------------------KLENSAESLAESIHNQGSFNYKAGTFA 677 A G+ G Q +LE SA SLAE+I QG KA A Sbjct: 122 PAMGSDGFGDSGGAQGVRQLGGDYHDWDMASARELETSASSLAETI-QQGELPAKASVIA 180
Query: 678 PSL 686 P++ Sbjct: 181 PTI 183
>tr|A3AMH8|A3AMH8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012000 PE=4 SV=1 Length = 542
Score = 38.9 bits (89), Expect = 0.31 Identities = 40/123 (32%), Positives = 53/123 (43%), Gaps = 18/123 (14%) Frame = +3
Query: 372 GDAEDASPLVETAESDTELPQDKLRSAALQKLEEAGQDTALGHGLKAIDTSVENLASGAW 551 GD E+ + AE E +D+ R AAL KLE A +D+ LG + T+ S A Sbjct: 99 GDGEEKEK-EKAAEGGGE--EDEQRKAALDKLENASEDSLLGQA--SCTTTFAVPFSSAM 153
Query: 552 QAFGTAWRGSRNFIQ------------------KLENSAESLAESIHNQGSFNYKAGTFA 677 A G+ G Q +LE SA SLAE+I QG KA A Sbjct: 154 PAMGSDGFGDSGGAQGVRQLGGDYHDWDMASARELETSASSLAETI-QQGELPAKASVIA 212
Query: 678 PSL 686 P++ Sbjct: 213 PTI 215
|