DK950508
Clone id TST38A01NGRL0008_N12
Library
Length 601
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_N12. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
CCATCTCAGCGAGCCAGCGACGAACTCCCCGAATGCCTGTGCTCTCATCATCACTCGCGC
GAATTGCTGCACATGAAGACAGCGTCAATTTCGCCGAAAGAAGCAGGGTTCAGATAGCAG
GGAATTCAGAGAAGGAGAGAGAAAGAGAGAGAGCGCACTCGTACGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACGGGACATAGCCTTCACTGCAC
TTACCCAGCCCATCTTATCTGATTTCTCTGACACGGACGGGCAGCAGCTCTTTGGGACAT
TTGATTCCAAACAGATGAAGACCCAACAACTCATGTTTCTCTAATCAGGGTAAGAGTGCC
AAGATCACAGAGCTCTGCTGCCTAGAATGTGCATCACTCGACAGATATGGCAATGGCGTT
TATGATTTTGAAATCAAGCACACCATCTACTTTTGATGATTTCAGGCATTTTCCTGATCA
TCTAGCATTGCTTTGGATATTTCAAATTTGAAGGATGCTCATGAGTATCAAAAATAACTG
AAGACTGTGCATAACTAAAGGTTCATTGAAAGATTTTCAGCCAGTAGGAACCATGCAAGC
A
■■Homology search results ■■ -
sp_hit_id Q8YCP2
Definition sp|Q8YCP2|NIKR_BRUME Nickel-responsive regulator OS=Brucella melitensis
Align length 38
Score (bit) 30.0
E-value 9.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950508|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_N12, 5'
(601 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8YCP2|NIKR_BRUME Nickel-responsive regulator OS=Brucella mel... 30 9.4

>sp|Q8YCP2|NIKR_BRUME Nickel-responsive regulator OS=Brucella
melitensis GN=nikR PE=3 SV=2
Length = 132

Score = 30.0 bits (66), Expect = 9.4
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2

Query: 371 SSAA*NVHHSTDMAMAFMILKSSTPSTFDDFRHFPDHL 484
S A+ +VH D + ILKS T DD RHF DH+
Sbjct: 83 SVASMHVHLDHDRCLEVSILKSKT----DDVRHFADHV 116


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950508|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_N12, 5'
(601 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******