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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950517
Clone id TST38A01NGRL0008_N21
Library
Length 664
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_N21. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CAATGGCTGGTGTGCACTTGAAGCTCGCCATAGCCAGCTCTAGCAGCGAGCTTTTCCCCT
CATCACAGCGTCTACAGGCCTGCGCACTACCTTCCTTGTCACCCCAGATACGCATTTCAG
CTACGCGGTGCTCGCTCGCCAACAACAACAGCGGCAGCAGCGATGGCCCCCAGCTCATTG
TTAGCAAGAGGCAGCTCCTTACGGGCTCTGCATCTCTCGCCGTGTCATCTCTTGTAGCTT
TCCAGAGAGATGCGCAAGCAGAAGAGCTTCTTTCTGAATGGGAGATGGTGCCACTTCCCA
TTGACTCCGGTGTCGTGCTCTTGGATATCGCCTTTGTTCCTGACGAACCTGATCATGGTT
TCCTTCTAGGCACAAGGCAAACACTTCTGGAAACCAAAGATGGAGGAAAATCATGGGCAC
CTCGATCTATTCCATCAGCAGAAGATGAGGATTTTAACTACAGGTTTAATTCAATCAGCT
TTTGTGGAAAGGAAGGTTGGATCGTCGGGAAACCAGCCATTCTTTTGCACACTGCCGATG
CAGGCATAAGCTGGGATCGAATTCCTCTAAGTTCAAGACTTCCTGGCACTCCTGTAATTA
TCAAGGGAACGGGTGAAAAAGGTGCAGAGATGGTCACAGATGAGGGAGCAATCTATGTCA
CGTC
■■Homology search results ■■ -
sp_hit_id O82660
Definition sp|O82660|P2SAF_ARATH Photosystem II stability/assembly factor HCF136, chloroplastic OS=Arabidopsis thaliana
Align length 199
Score (bit) 230.0
E-value 6.0e-60
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950517|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_N21, 5'
         (664 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O82660|P2SAF_ARATH Photosystem II stability/assembly factor H...   230   6e-60
sp|Q5Z5A8|P2SAF_ORYSJ Photosystem II stability/assembly factor H...   226   8e-59
sp|P48325|P2SAF_CYAPA Photosystem II stability/assembly factor H...   153   9e-37
sp|Q9AW48|P2SAF_GUITH Photosystem II stability/assembly factor H...   143   7e-34
sp|Q8YQI3|YC48L_ANASP Ycf48-like protein OS=Anabaena sp. (strain...   142   2e-33
sp|Q3MC08|YC48L_ANAVT Ycf48-like protein OS=Anabaena variabilis ...   141   4e-33
sp|Q8DI95|YC48L_THEEB Ycf48-like protein OS=Thermosynechococcus ...   131   4e-30
sp|P73069|YC48L_SYNY3 Ycf48-like protein OS=Synechocystis sp. (s...   126   9e-29
sp|Q2JW20|YC48L_SYNJA Ycf48-like protein OS=Synechococcus sp. (s...   124   4e-28
sp|Q31P11|YC48L_SYNE7 Ycf48-like protein OS=Synechococcus elonga...   124   4e-28
sp|Q8RSW4|YC48L_SYNP2 Ycf48-like protein OS=Synechococcus sp. (s...   124   6e-28
sp|Q2JJR3|YC48L_SYNJB Ycf48-like protein OS=Synechococcus sp. GN...   122   1e-27
sp|Q5N557|YC48L_SYNP6 Ycf48-like protein OS=Synechococcus sp. (s...   121   4e-27
sp|Q7V4Q3|YC48L_PROMM Ycf48-like protein OS=Prochlorococcus mari...   115   2e-25
sp|Q7U9P8|YC48L_SYNPX Ycf48-like protein OS=Synechococcus sp. (s...   110   5e-24
sp|Q7VDP1|YC48L_PROMA Ycf48-like protein OS=Prochlorococcus mari...   110   5e-24
sp|Q3B0C5|YC48L_SYNS9 Ycf48-like protein OS=Synechococcus sp. (s...   110   9e-24
sp|Q3AN55|YC48L_SYNSC Ycf48-like protein OS=Synechococcus sp. (s...   106   1e-22
sp|Q46M02|YC48L_PROMT Ycf48-like protein OS=Prochlorococcus mari...   105   2e-22
sp|Q7NMB1|YC48L_GLOVI Ycf48-like protein OS=Gloeobacter violaceu...   105   3e-22
sp|Q7V301|YC48L_PROMP Ycf48-like protein OS=Prochlorococcus mari...   103   8e-22
sp|Q31CN6|YC48L_PROM9 Ycf48-like protein OS=Prochlorococcus mari...   100   5e-21
sp|A1JHZ7|TPIS_YERE8 Triosephosphate isomerase OS=Yersinia enter...    32   3.0  
sp|A3CY20|Y2347_METMJ Putative HTH-type transcriptional regulato...    31   5.1  
sp|P85303|P2SAF_SPIOL Photosystem II stability/assembly factor H...    31   5.1  
sp|Q9HZJ2|FADB_PSEAE Fatty acid oxidation complex subunit alpha ...    31   5.1  
sp|Q02PH8|FADB_PSEAB Fatty acid oxidation complex subunit alpha ...    31   5.1  
sp|A6V382|FADB_PSEA7 Fatty acid oxidation complex subunit alpha ...    31   5.1  
sp|Q66GA1|TPIS_YERPS Triosephosphate isomerase OS=Yersinia pseud...    31   6.7  
sp|A4TSA1|TPIS_YERPP Triosephosphate isomerase OS=Yersinia pesti...    31   6.7  

>sp|O82660|P2SAF_ARATH Photosystem II stability/assembly factor
           HCF136, chloroplastic OS=Arabidopsis thaliana GN=HCF136
           PE=1 SV=1
          Length = 403

 Score =  230 bits (586), Expect = 6e-60
 Identities = 128/199 (64%), Positives = 144/199 (72%), Gaps = 8/199 (4%)
 Frame = +3

Query: 90  PSLSPQI---RISATRCSLANNN-----SGSSDGPQLIVSKRQLLTGXXXXXXXXXXXFQ 245
           PS+SP+    RIS      A+++     S SS    L  S+R+LL               
Sbjct: 15  PSVSPRFLSQRISHRLIPKASSSPPPSPSPSSSSSSLSFSRRELLY-QSAAVSLSLSSIV 73

Query: 246 RDAQAEELLSEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPR 425
             A+A+E LSEWE V LPID GVVLLDIAFVPDEP  GFLLGTRQTLLETKDGG +W PR
Sbjct: 74  GPARADEQLSEWERVFLPIDPGVVLLDIAFVPDEPSRGFLLGTRQTLLETKDGGSTWNPR 133

Query: 426 SIPSAEDEDFNYRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIK 605
           SIPSAE+EDFNYRFNSISF GKEGWI+GKPAILL+TADAG +WDRIPLSS+LPG  V IK
Sbjct: 134 SIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILLYTADAGENWDRIPLSSQLPGDMVFIK 193

Query: 606 GTGEKGAEMVTDEGAIYVT 662
            T +K AEMVTDEGAIYVT
Sbjct: 194 ATEDKSAEMVTDEGAIYVT 212



 Score = 31.2 bits (69), Expect = 5.1
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
 Frame = +3

Query: 267 LLSEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAED 446
           +  E+E VP+    G  +LD+ +  +E    +  G    LL T++GGKSW   +   A D
Sbjct: 319 ITEEFEEVPVQ-SRGFGILDVGYRSEE--EAWAAGGSGILLRTRNGGKSW---NRDKAAD 372

Query: 447 EDFNYRFNSISFC-GKEGWIVGKPAILL 527
            +      ++ F   K+G+++G   +LL
Sbjct: 373 -NIAANLYAVKFVDDKKGFVLGNDGVLL 399



 Score = 31.2 bits (69), Expect = 5.1
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +3

Query: 489 KEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAEMVTDEGAI 653
           +E W  G   ILL T + G SW+R   +  +      +K   +K   ++ ++G +
Sbjct: 344 EEAWAAGGSGILLRTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLGNDGVL 398


>sp|Q5Z5A8|P2SAF_ORYSJ Photosystem II stability/assembly factor
           HCF136, chloroplastic OS=Oryza sativa subsp. japonica
           GN=HCF136 PE=3 SV=1
          Length = 416

 Score =  226 bits (576), Expect = 8e-59
 Identities = 107/131 (81%), Positives = 118/131 (90%)
 Frame = +3

Query: 270 LSEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDE 449
           LSEWE V LPID GVVLLDIAFVPD+P HGFLLGTRQT+LETK+GG +W PRSIPSAEDE
Sbjct: 73  LSEWERVLLPIDPGVVLLDIAFVPDDPSHGFLLGTRQTILETKNGGNTWFPRSIPSAEDE 132

Query: 450 DFNYRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAE 629
           DFNYRFNS+SF GKEGWI+GKPAILLHT+DAG SW+RIPLS++LPG  V IK TGE+ AE
Sbjct: 133 DFNYRFNSVSFMGKEGWIIGKPAILLHTSDAGDSWERIPLSAQLPGNMVYIKATGEQSAE 192

Query: 630 MVTDEGAIYVT 662
           MVTDEGAIYVT
Sbjct: 193 MVTDEGAIYVT 203



 Score = 30.4 bits (67), Expect = 8.7
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +3

Query: 309 GVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDEDFNYRFNSISFCG 488
           G  +LD+ +     D  +  G    LL+T +GGK+W    +     ++      S+ F G
Sbjct: 345 GFGILDVGY--RSKDEAWAAGGSGVLLKTTNGGKTW----VRDKAADNIAANLYSVKFLG 398

Query: 489 -KEGWIVGKPAILL 527
             +G+++G   +LL
Sbjct: 399 DNKGYVLGNDGVLL 412


>sp|P48325|P2SAF_CYAPA Photosystem II stability/assembly factor
           HCF136 OS=Cyanophora paradoxa GN=hcf136 PE=3 SV=1
          Length = 333

 Score =  153 bits (386), Expect = 9e-37
 Identities = 76/129 (58%), Positives = 90/129 (69%)
 Frame = +3

Query: 276 EWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDEDF 455
           +WE +PL  D   +LLDI FVPD+P  G+LLGTR TL ET D GK+W  RS+   +D+  
Sbjct: 32  KWEQIPLNTDE--ILLDIGFVPDQPQRGWLLGTRSTLFETTDKGKTWELRSLNLEDDK-- 87

Query: 456 NYRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAEMV 635
            YR NSISF GKEGW+ GKPAILLHT D G SW RIPLS++LPG P +I   G   AE+ 
Sbjct: 88  -YRLNSISFSGKEGWVTGKPAILLHTTDGGSSWSRIPLSNQLPGDPALITALGTGKAELA 146

Query: 636 TDEGAIYVT 662
           TD GAIY T
Sbjct: 147 TDIGAIYRT 155


>sp|Q9AW48|P2SAF_GUITH Photosystem II stability/assembly factor
           HCF136, chloroplastic OS=Guillardia theta GN=hcf136 PE=3
           SV=1
          Length = 395

 Score =  143 bits (361), Expect = 7e-34
 Identities = 67/131 (51%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = +3

Query: 273 SEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAE-DE 449
           + W  V LP+DS  VL DI F   E  HG+L+G++ T LET DGG +W PR+  + + DE
Sbjct: 69  TSWTKVDLPVDS--VLFDIEFTDPECKHGWLVGSKGTFLETDDGGNTWVPRTFANLDPDE 126

Query: 450 DFNYRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAE 629
           +  YRF +ISF G+EGW++GKPAI+L+T D G +W R+P+S +LPG P +IK  G + AE
Sbjct: 127 ELTYRFENISFEGQEGWVIGKPAIILYTKDGGKTWFRVPVSPKLPGEPCLIKALGSESAE 186

Query: 630 MVTDEGAIYVT 662
           + T  GAIYVT
Sbjct: 187 LTTTSGAIYVT 197


>sp|Q8YQI3|YC48L_ANASP Ycf48-like protein OS=Anabaena sp. (strain
           PCC 7120) GN=alr3844 PE=3 SV=1
          Length = 339

 Score =  142 bits (358), Expect = 2e-33
 Identities = 73/128 (57%), Positives = 91/128 (71%)
 Frame = +3

Query: 279 WEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDEDFN 458
           W +V LP ++   LLDIAF  + P HGFL+G+  TLLET DGG +W P ++  A D+D  
Sbjct: 34  WAVVSLPTEAK--LLDIAFT-ENPQHGFLVGSSATLLETNDGGNNWQPLNL--ALDDD-R 87

Query: 459 YRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAEMVT 638
           YRF+S+SF GKEGWIVG+P++LLHT D G SW RIPLS +LPG P+ I+  G   AEM T
Sbjct: 88  YRFDSVSFAGKEGWIVGEPSLLLHTTDEGRSWSRIPLSEKLPGNPIAIQALGTDIAEMAT 147

Query: 639 DEGAIYVT 662
           D GAIY T
Sbjct: 148 DVGAIYKT 155


>sp|Q3MC08|YC48L_ANAVT Ycf48-like protein OS=Anabaena variabilis
           (strain ATCC 29413 / PCC 7937) GN=Ava_1856 PE=3 SV=1
          Length = 339

 Score =  141 bits (355), Expect = 4e-33
 Identities = 72/128 (56%), Positives = 90/128 (70%)
 Frame = +3

Query: 279 WEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDEDFN 458
           W +V LP ++   LLDIAF  + P HGFL+G+  TLLET DGG +W P ++  A D+D  
Sbjct: 34  WAVVSLPTEAK--LLDIAFT-ENPQHGFLVGSNATLLETNDGGNNWQPLNL--ALDDD-R 87

Query: 459 YRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAEMVT 638
           YRF+S+SF GKEGWI G+P++LLHT D G SW RIPLS +LPG P+ I+  G   AEM T
Sbjct: 88  YRFDSVSFAGKEGWIAGEPSLLLHTTDEGRSWSRIPLSEKLPGNPIAIQALGTDIAEMAT 147

Query: 639 DEGAIYVT 662
           D GAIY T
Sbjct: 148 DVGAIYKT 155



 Score = 31.2 bits (69), Expect = 5.1
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
 Frame = +3

Query: 249 DAQAEELLSEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRS 428
           DAQ  EL + W            LLD+A+    P+  ++ G    LL + DGGK+W    
Sbjct: 247 DAQTPELATSWG-----------LLDMAY--RTPNEVWIGGGSGNLLVSTDGGKTWE--- 290

Query: 429 IPSAEDEDFNYRFNSISFC-GKEGWIVGKPAILL 527
               + E+    F  + F    +G+++G   +LL
Sbjct: 291 -KDRDVEEVAANFYKVVFLKPDQGFVIGDRGVLL 323


>sp|Q8DI95|YC48L_THEEB Ycf48-like protein OS=Thermosynechococcus
           elongatus (strain BP-1) GN=tll1695 PE=3 SV=1
          Length = 347

 Score =  131 bits (329), Expect = 4e-30
 Identities = 63/128 (49%), Positives = 88/128 (68%)
 Frame = +3

Query: 279 WEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDEDFN 458
           WE + LP  +   +LD++F+  +  HG+L+G   TL+ET+DGG++W PR++     +   
Sbjct: 47  WEAIQLPTTA--TILDMSFI--DRHHGWLVGVNATLMETRDGGQTWEPRTLVLDHSD--- 99

Query: 459 YRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAEMVT 638
           YRFNS+SF G EGWIVG+P I+LHT D G SW +IPL  +LPG+P +IK  G   AEM+T
Sbjct: 100 YRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT 159

Query: 639 DEGAIYVT 662
           + GAIY T
Sbjct: 160 NVGAIYRT 167


>sp|P73069|YC48L_SYNY3 Ycf48-like protein OS=Synechocystis sp.
           (strain PCC 6803) GN=slr2034 PE=3 SV=1
          Length = 342

 Score =  126 bits (317), Expect = 9e-29
 Identities = 64/128 (50%), Positives = 84/128 (65%)
 Frame = +3

Query: 279 WEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDEDFN 458
           W+ + L  DS     DIAF  D P+HG+L+GT++T+ ET DGG +W  + I   E++   
Sbjct: 40  WQEIALETDS--TFADIAFTED-PNHGWLVGTKETIFETTDGGDTWEQKLIDLGEEKA-- 94

Query: 459 YRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAEMVT 638
             F+++SF G EGWI GKP+ILLHT D G +W RIPLS +LPG P  I   G + AEM+T
Sbjct: 95  -SFSAVSFSGNEGWITGKPSILLHTTDGGQTWARIPLSEKLPGAPYSIIALGPQTAEMIT 153

Query: 639 DEGAIYVT 662
           D GAIY T
Sbjct: 154 DLGAIYKT 161



 Score = 38.9 bits (89), Expect = 0.024
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
 Frame = +3

Query: 240 FQRDAQAEELLSEWEMVPLPIDSGVV-LLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSW 416
           F  D  AEE    W  V  P D G   LLD++F    P+  ++ G    LL ++DGG++W
Sbjct: 243 FSTDPDAEE----WSDVIAPQDKGSWGLLDLSF--RTPEEVWVAGASGNLLMSQDGGQTW 296

Query: 417 APRSIPSAEDEDFNYRFNSISFCGKEGWIVGKPAILL 527
           A  +    ED   N  +  +    ++G+++G+  ILL
Sbjct: 297 AKDT--GVEDIPANL-YRVVFLSPEKGFVLGQDGILL 330


>sp|Q2JW20|YC48L_SYNJA Ycf48-like protein OS=Synechococcus sp.
           (strain JA-3-3Ab) GN=CYA_0848 PE=3 SV=2
          Length = 334

 Score =  124 bits (311), Expect = 4e-28
 Identities = 62/128 (48%), Positives = 83/128 (64%)
 Frame = +3

Query: 279 WEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDEDFN 458
           W+ V +P  +  +LLDIAF    P HG+L+G + TLLE++DGG  W  R + + E E + 
Sbjct: 33  WQQVEVPTQN--ILLDIAFTGTNPSHGWLVGDKATLLESQDGGLHWQVRKLTALEPEAY- 89

Query: 459 YRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAEMVT 638
              +SISF G EGW+VG+P ILLHT + G  W  I LS +LPG P++I+  G   AEMVT
Sbjct: 90  --LSSISFAGAEGWVVGQPRILLHTLNEGSDWTSIRLSKQLPGEPILIQALGPGAAEMVT 147

Query: 639 DEGAIYVT 662
           + GAIY T
Sbjct: 148 NVGAIYRT 155


>sp|Q31P11|YC48L_SYNE7 Ycf48-like protein OS=Synechococcus elongatus
           (strain PCC 7942) GN=Synpcc7942_1178 PE=3 SV=1
          Length = 349

 Score =  124 bits (311), Expect = 4e-28
 Identities = 62/128 (48%), Positives = 87/128 (67%)
 Frame = +3

Query: 273 SEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDED 452
           S W+++ L  +    +LDIAF  ++  HG+L+GT   L ET DGG+SW+ R++    D D
Sbjct: 40  SPWQVIDLGTEK--TILDIAFTSNK-QHGWLVGTDLALYETLDGGQSWSERAL----DLD 92

Query: 453 FNYRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAEM 632
             YR NSISF G EGW+VG+P+++LHT D G +W RIPLS +LPG+P+++   G+  AEM
Sbjct: 93  ETYRLNSISFKGDEGWVVGQPSLMLHTTDGGKNWLRIPLSEKLPGSPLLVTALGKGEAEM 152

Query: 633 VTDEGAIY 656
            TD  AIY
Sbjct: 153 ATDVAAIY 160



 Score = 31.2 bits (69), Expect = 5.1
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
 Frame = +3

Query: 261 EELLSEWEMVPLPID----SGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSW-APR 425
           EE+L E +     I+    +G   LD+A+   +    +L G   TLL ++DGG+ W   R
Sbjct: 254 EEMLEESDAWGTAIEPERNAGWGFLDLAYRSKQEI--WLSGGSGTLLVSEDGGEHWQRDR 311

Query: 426 SIPSAEDEDFNYRFNSISFCGKEGWIVGKPAILLHTA 536
            I       +  +F    F  K+G+++G+  +LL  A
Sbjct: 312 VIAKLPSNLYTIKF----FAPKQGFVLGQRGLLLRYA 344
tr_hit_id A9RRW8
Definition tr|A9RRW8|A9RRW8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 137
Score (bit) 229.0
E-value 9.0e-59
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950517|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_N21, 5'
         (664 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RRW8|A9RRW8_PHYPA Predicted protein OS=Physcomitrella paten...   229   9e-59
tr|A5JVZ6|A5JVZ6_MAIZE Plastid high chlorophyll fluorescence 136...   229   1e-58
tr|Q0D9A9|Q0D9A9_ORYSJ Os06g0729500 protein OS=Oryza sativa subs...   226   1e-57
tr|B8B2X2|B8B2X2_ORYSI Putative uncharacterized protein OS=Oryza...   226   1e-57
tr|A9T9I6|A9T9I6_PHYPA Predicted protein OS=Physcomitrella paten...   226   1e-57
tr|A3BFM5|A3BFM5_ORYSJ Putative uncharacterized protein OS=Oryza...   226   1e-57
tr|A7P2W0|A7P2W0_VITVI Chromosome chr1 scaffold_5, whole genome ...   224   3e-57
tr|A4S6D5|A4S6D5_OSTLU Predicted protein OS=Ostreococcus lucimar...   184   4e-45
tr|Q00X74|Q00X74_OSTTA Sortilin and related receptors (ISS) (Fra...   166   9e-40
tr|A8HVJ9|A8HVJ9_CHLRE Photosystem II stability/assembly factor ...   164   3e-39
tr|A9BKA9|A9BKA9_9CRYP Hfc136 OS=Cryptophyta GN=HAN_1g100 PE=4 SV=1   147   7e-34
tr|B8HVD6|B8HVD6_9CHRO Ycf48-like protein OS=Cyanothece sp. PCC ...   143   1e-32
tr|B2J6S9|B2J6S9_NOSP7 Glycosyl hydrolase, BNR repeat-containing...   142   1e-32
tr|B0C6T3|B0C6T3_ACAM1 Photosystem II stability/assembly factor ...   141   4e-32
tr|A0ZI40|A0ZI40_NODSP Glycosyl hydrolase, BNR repeat OS=Nodular...   135   2e-30
tr|Q2IA25|Q2IA25_PAVLU Chloroplast stability factor hcf136 (Frag...   134   5e-30
tr|B4WII0|B4WII0_9SYNE BNR/Asp-box repeat domain protein OS=Syne...   132   2e-29
tr|B7G3A6|B7G3A6_PHATR Predicted protein OS=Phaeodactylum tricor...   130   6e-29
tr|A0YVX5|A0YVX5_9CYAN Putative uncharacterized protein OS=Lyngb...   129   1e-28
tr|B8CFN3|B8CFN3_THAPS Predicted protein OS=Thalassiosira pseudo...   129   1e-28
tr|B4W448|B4W448_9CYAN BNR/Asp-box repeat domain protein OS=Micr...   129   2e-28
tr|Q10YT1|Q10YT1_TRIEI Glycosyl hydrolase, BNR repeat OS=Trichod...   125   3e-27
tr|B3DF98|B3DF98_MICAN Ycf48-like protein OS=Microcystis aerugin...   124   5e-27
tr|Q4BV34|Q4BV34_CROWT Glycosyl hydrolase, BNR repeat OS=Crocosp...   124   5e-27
tr|Q9XBL9|Q9XBL9_ANAVA Putative uncharacterized protein (Fragmen...   123   9e-27
tr|B4B7A7|B4B7A7_9CHRO Glycosyl hydrolase BNR repeat-containing ...   123   1e-26
tr|B5W813|B5W813_SPIMA Glycosyl hydrolase, BNR repeat OS=Arthros...   122   2e-26
tr|A8YAZ5|A8YAZ5_MICAE Similar to tr|Q4BV34|Q4BV34_CROWT Glycosy...   122   2e-26
tr|A3IRL1|A3IRL1_9CHRO Putative uncharacterized protein OS=Cyano...   121   3e-26
tr|B1WVS1|B1WVS1_CYAA5 Probable photosystem II stability/assembl...   121   4e-26

>tr|A9RRW8|A9RRW8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_160605 PE=4 SV=1
          Length = 434

 Score =  229 bits (585), Expect = 9e-59
 Identities = 107/137 (78%), Positives = 122/137 (89%)
 Frame = +3

Query: 252 AQAEELLSEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSI 431
           A A+E +S WE V LP+D GVVLLD+AFVPD+PD GFLLGTRQTLLETKDGG+SW+PRSI
Sbjct: 108 ALADETISSWEQVTLPVDPGVVLLDMAFVPDQPDRGFLLGTRQTLLETKDGGRSWSPRSI 167

Query: 432 PSAEDEDFNYRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGT 611
           PSAEDEDFNYRFNSISF G+EGWI+GKPAILLHT++ G SW+RIPLS RLPG P+ I+GT
Sbjct: 168 PSAEDEDFNYRFNSISFQGQEGWIIGKPAILLHTSNGGESWERIPLSVRLPGNPITIRGT 227

Query: 612 GEKGAEMVTDEGAIYVT 662
           G + AEMVTDEGAIYVT
Sbjct: 228 GPQSAEMVTDEGAIYVT 244


>tr|A5JVZ6|A5JVZ6_MAIZE Plastid high chlorophyll fluorescence 136
           OS=Zea mays GN=HCF136 PE=4 SV=1
          Length = 394

 Score =  229 bits (583), Expect = 1e-58
 Identities = 110/139 (79%), Positives = 125/139 (89%), Gaps = 2/139 (1%)
 Frame = +3

Query: 252 AQAEEL--LSEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPR 425
           A+A+E+  LSEWE + LPIDSGVVLLDIAFVPD+P HGFLLGTRQT+LETKDGG +W PR
Sbjct: 65  ARADEVPALSEWERIFLPIDSGVVLLDIAFVPDDPSHGFLLGTRQTILETKDGGNTWFPR 124

Query: 426 SIPSAEDEDFNYRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIK 605
           SIPSAEDEDFNYRFNS+SF G+EGWI+GKPAILLHT+DAG SW+RIPLS++LPG  V IK
Sbjct: 125 SIPSAEDEDFNYRFNSVSFKGREGWIIGKPAILLHTSDAGESWERIPLSAQLPGNMVYIK 184

Query: 606 GTGEKGAEMVTDEGAIYVT 662
            TGE+ AEMVTDEGAIYVT
Sbjct: 185 ATGEQSAEMVTDEGAIYVT 203


>tr|Q0D9A9|Q0D9A9_ORYSJ Os06g0729500 protein OS=Oryza sativa subsp.
           japonica GN=Os06g0729500 PE=4 SV=1
          Length = 1573

 Score =  226 bits (576), Expect = 1e-57
 Identities = 107/131 (81%), Positives = 118/131 (90%)
 Frame = +3

Query: 270 LSEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDE 449
           LSEWE V LPID GVVLLDIAFVPD+P HGFLLGTRQT+LETK+GG +W PRSIPSAEDE
Sbjct: 73  LSEWERVLLPIDPGVVLLDIAFVPDDPSHGFLLGTRQTILETKNGGNTWFPRSIPSAEDE 132

Query: 450 DFNYRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAE 629
           DFNYRFNS+SF GKEGWI+GKPAILLHT+DAG SW+RIPLS++LPG  V IK TGE+ AE
Sbjct: 133 DFNYRFNSVSFMGKEGWIIGKPAILLHTSDAGDSWERIPLSAQLPGNMVYIKATGEQSAE 192

Query: 630 MVTDEGAIYVT 662
           MVTDEGAIYVT
Sbjct: 193 MVTDEGAIYVT 203


>tr|B8B2X2|B8B2X2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_24541 PE=4 SV=1
          Length = 1485

 Score =  226 bits (576), Expect = 1e-57
 Identities = 107/131 (81%), Positives = 118/131 (90%)
 Frame = +3

Query: 270 LSEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDE 449
           LSEWE V LPID GVVLLDIAFVPD+P HGFLLGTRQT+LETK+GG +W PRSIPSAEDE
Sbjct: 73  LSEWERVLLPIDPGVVLLDIAFVPDDPSHGFLLGTRQTILETKNGGNTWFPRSIPSAEDE 132

Query: 450 DFNYRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAE 629
           DFNYRFNS+SF GKEGWI+GKPAILLHT+DAG SW+RIPLS++LPG  V IK TGE+ AE
Sbjct: 133 DFNYRFNSVSFMGKEGWIIGKPAILLHTSDAGDSWERIPLSAQLPGNMVYIKATGEQSAE 192

Query: 630 MVTDEGAIYVT 662
           MVTDEGAIYVT
Sbjct: 193 MVTDEGAIYVT 203


>tr|A9T9I6|A9T9I6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_142308 PE=4 SV=1
          Length = 353

 Score =  226 bits (576), Expect = 1e-57
 Identities = 106/137 (77%), Positives = 120/137 (87%)
 Frame = +3

Query: 252 AQAEELLSEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSI 431
           A A+E +S WE V LP+D GVVLLD+AFVPD+PD GFLLGTRQTLLETKD G+SW+PRSI
Sbjct: 10  ALADETISSWEQVVLPVDPGVVLLDMAFVPDQPDRGFLLGTRQTLLETKDAGRSWSPRSI 69

Query: 432 PSAEDEDFNYRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGT 611
           PSAEDEDFNYRFNSISF G+EGWI+GKPAILLHT++ G SW+RIPLS RLPG P+ I+GT
Sbjct: 70  PSAEDEDFNYRFNSISFQGQEGWIIGKPAILLHTSNGGESWERIPLSIRLPGNPITIRGT 129

Query: 612 GEKGAEMVTDEGAIYVT 662
           G   AEMVTDEGAIYVT
Sbjct: 130 GPDSAEMVTDEGAIYVT 146



 Score = 33.9 bits (76), Expect = 9.2
 Identities = 23/88 (26%), Positives = 39/88 (44%)
 Frame = +3

Query: 264 ELLSEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAE 443
           ++  ++E   +P   G  +LD+ +     D  +  G    LL T DGGKSW    I    
Sbjct: 269 QVTEDFEEQKIP-SRGFGILDVGY--RSKDEAWAAGGSGILLRTTDGGKSW----IRDKV 321

Query: 444 DEDFNYRFNSISFCGKEGWIVGKPAILL 527
            +       S+ F   +G+++G   +LL
Sbjct: 322 ADKIAANLYSVKFIDNKGFVLGNDGVLL 349


>tr|A3BFM5|A3BFM5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_021847 PE=4 SV=1
          Length = 464

 Score =  226 bits (576), Expect = 1e-57
 Identities = 107/131 (81%), Positives = 118/131 (90%)
 Frame = +3

Query: 270 LSEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDE 449
           LSEWE V LPID GVVLLDIAFVPD+P HGFLLGTRQT+LETK+GG +W PRSIPSAEDE
Sbjct: 73  LSEWERVLLPIDPGVVLLDIAFVPDDPSHGFLLGTRQTILETKNGGNTWFPRSIPSAEDE 132

Query: 450 DFNYRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAE 629
           DFNYRFNS+SF GKEGWI+GKPAILLHT+DAG SW+RIPLS++LPG  V IK TGE+ AE
Sbjct: 133 DFNYRFNSVSFMGKEGWIIGKPAILLHTSDAGDSWERIPLSAQLPGNMVYIKATGEQSAE 192

Query: 630 MVTDEGAIYVT 662
           MVTDEGAIYVT
Sbjct: 193 MVTDEGAIYVT 203



 Score = 40.4 bits (93), Expect = 0.098
 Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
 Frame = +3

Query: 309 GVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWA-PRSIPSAEDEDFNYRFNSISF- 482
           G  +LD+ +     D  +  G    LL+T +GGK+W   ++  +     ++ +  S +F 
Sbjct: 345 GFGILDVGY--RSKDEAWAAGGSGVLLKTTNGGKTWVRDKAADNIAANLYSVKLKSSAFH 402

Query: 483 CGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAEMVTDEGAI 653
              E W  G   +LL T + G +W R   +  +      +K  G+    ++ ++G +
Sbjct: 403 LQDEAWAAGGSGVLLKTTNGGKTWVRDKAADNIAANLYSVKFLGDNKGYVLGNDGVL 459


>tr|A7P2W0|A7P2W0_VITVI Chromosome chr1 scaffold_5, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00030205001
           PE=4 SV=1
          Length = 404

 Score =  224 bits (572), Expect = 3e-57
 Identities = 109/134 (81%), Positives = 119/134 (88%)
 Frame = +3

Query: 261 EELLSEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSA 440
           E LLSEWE V LPID GVVLLDIAFVPD+  HGFLLGTRQT++ETKDGG +W PRSIPSA
Sbjct: 80  EPLLSEWERVYLPIDPGVVLLDIAFVPDDLSHGFLLGTRQTIMETKDGGNTWVPRSIPSA 139

Query: 441 EDEDFNYRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEK 620
           EDEDFNYRFNSISF GKEGWIVGKP+ILL+T+DAG SW+RIPLS++LPG  V IK TGEK
Sbjct: 140 EDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGESWERIPLSAQLPGDIVYIKATGEK 199

Query: 621 GAEMVTDEGAIYVT 662
            AEMVTDEGAIYVT
Sbjct: 200 SAEMVTDEGAIYVT 213


>tr|A4S6D5|A4S6D5_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_47343 PE=4 SV=1
          Length = 363

 Score =  184 bits (467), Expect = 4e-45
 Identities = 85/131 (64%), Positives = 102/131 (77%), Gaps = 1/131 (0%)
 Frame = +3

Query: 273 SEWEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDED 452
           S WE V LP++ GV+LLDIAF  ++P HGFLLGTRQT+LETKDGGK+W  R +    D+D
Sbjct: 35  SYWEQVELPLEPGVILLDIAFSSNDPKHGFLLGTRQTVLETKDGGKTWDVRDLSGLLDDD 94

Query: 453 FNYRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKG-AE 629
            NYRFNS+SFCG EGWI+GKPA+LLHT D G +W+R+ LS RLPG PV+I    + G AE
Sbjct: 95  VNYRFNSVSFCGDEGWIIGKPAVLLHTTDGGANWERVGLSPRLPGAPVLITAVQDNGTAE 154

Query: 630 MVTDEGAIYVT 662
           MVTDEGAIY T
Sbjct: 155 MVTDEGAIYFT 165


>tr|Q00X74|Q00X74_OSTTA Sortilin and related receptors (ISS)
           (Fragment) OS=Ostreococcus tauri GN=Ot13g01090 PE=4 SV=1
          Length = 337

 Score =  166 bits (421), Expect = 9e-40
 Identities = 78/129 (60%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
 Frame = +3

Query: 279 WEMVPLPIDSGVVLLDIAFVPDEPDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDEDFN 458
           WE V LP++ GV+LLDIAFV ++   GFLLGTRQT+LET +GGK+W  R +    D+D N
Sbjct: 12  WERVELPLEPGVILLDIAFVNEQ--RGFLLGTRQTILETTNGGKTWDARDLTGLLDDDVN 69

Query: 459 YRFNSISFCGKEGWIVGKPAILLHTADAGISWDRIPLSSRLPGTPVIIKGTGEKG-AEMV 635
           YRFNS+SF G+EGWI+GKPA+LLHT D G +W+R+ LS RLPG P+++    + G AEMV
Sbjct: 70  YRFNSVSFAGEEGWIIGKPAVLLHTVDGGKNWERVGLSPRLPGAPLLVTAVKDNGTAEMV 129

Query: 636 TDEGAIYVT 662
           TDEGAIY T
Sbjct: 130 TDEGAIYFT 138


>tr|A8HVJ9|A8HVJ9_CHLRE Photosystem II stability/assembly factor
           HCF136 (Fragment) OS=Chlamydomonas reinhardtii
           GN=CHLREDRAFT_112806 PE=4 SV=1
          Length = 302

 Score =  164 bits (416), Expect = 3e-39
 Identities = 77/105 (73%), Positives = 87/105 (82%)
 Frame = +3

Query: 348 PDHGFLLGTRQTLLETKDGGKSWAPRSIPSAEDEDFNYRFNSISFCGKEGWIVGKPAILL 527
           P  GFLLGTRQTLLET DGGK+WAPRSI +A DE FNYRFNSISF GKEGWIVGKPAILL
Sbjct: 3   PTKGFLLGTRQTLLETNDGGKTWAPRSIDAARDEGFNYRFNSISFAGKEGWIVGKPAILL 62

Query: 528 HTADAGISWDRIPLSSRLPGTPVIIKGTGEKGAEMVTDEGAIYVT 662
           HT+D G +W+RIPLSS+LPG  V++       AEM+TD+GAIYVT
Sbjct: 63  HTSDGGANWERIPLSSKLPGKGVVLDSLAPGQAEMITDQGAIYVT 107