DK950530 |
Clone id |
TST38A01NGRL0008_O11 |
Library |
TST38 |
Length |
637 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_O11. 5' end sequence. |
Accession |
DK950530 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL72Contig2 |
Sequence |
CTGTTTTTCGGCATCTTCAGAGTCGACCAAAAGGCTCAGAAGGAAGCGAGTCCAGTGTTT GCAAGACATCTTAATTCTCCTCCTTTGCCACTTAGCTCCATGGATTGCACATTTGCGGCG CAGGCCTCTCCGCAAACAGCTGCGGCTCCCCTAGCAGCCCTCTCACACAAGTCTTCTGTT CAGATCCCGCGGGGGGCTCTCCGCTCAAACTTCTGTGTGCAGACAGGTCTTTTAAAGTTG GATATTCAGAGAGGGATAAAGTCAAGGTTGAGGAGAAACAGGGGCAGTGTCAAGTTGGCA GTTGTTAGAGCAAGTGGTGATACTCAAGATAGTGGGTCTCCGATAGCTCCGTTCCAGCCA GAGTCTCCTACCGGTCAGTACTTGGCACAGCTTCTTCAAAGCCATCCCCATCTTGTTCCT GCTGCTGTTGAGCAAGAGCTTGAGAAGCTTGCTGAGAATCGTACTTTGCAGGATTCTTCC ACTGAGCCTAGCTCAAAGGGTTCCGAGCTTGTCCTCTACAGACGGATTGCTGAGCTCAAA GAGCAGGAAAGGCAAAGAGCATTGGAAGAGATAATCTACACCCTCATTGTTCAGAAGTTT GTAGGATCAGGCATTTCCATGGTACCCAACCTTGAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8BI22 |
Definition |
sp|Q8BI22|CN145_MOUSE Uncharacterized protein C14orf145 homolog OS=Mus musculus |
Align length |
128 |
Score (bit) |
35.8 |
E-value |
0.19 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QTZ7 |
Definition |
tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
119 |
Score (bit) |
135.0 |
E-value |
3.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950530|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_O11, 5' (637 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 135 3e-30 tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 134 6e-30 tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 127 6e-28 tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 125 3e-27 tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 125 3e-27 tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 125 3e-27 tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 124 6e-27 tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Ar... 124 6e-27 tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 121 4e-26 tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 119 1e-25 tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 119 2e-25 tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 117 5e-25 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 116 1e-24 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 116 1e-24 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 116 1e-24 tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 116 1e-24 tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 115 3e-24 tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 114 5e-24 tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 108 3e-22 tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 102 1e-20 tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 102 1e-20 tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 102 1e-20 tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (... 101 3e-20 tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 100 1e-19 tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia ... 87 1e-15 tr|A4S3L6|A4S3L6_OSTLU Predicted protein OS=Ostreococcus lucimar... 86 2e-15 tr|Q010E1|Q010E1_OSTTA Homology to unknown gene (Fragment) OS=Os... 82 2e-14 tr|B6TD75|B6TD75_MAIZE Putative uncharacterized protein OS=Zea m... 81 5e-14 tr|B8LKC1|B8LKC1_PICSI Putative uncharacterized protein OS=Picea... 81 6e-14 tr|B4FPS1|B4FPS1_MAIZE Putative uncharacterized protein OS=Zea m... 79 3e-13
>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006608001 PE=4 SV=1 Length = 362
Score = 135 bits (339), Expect = 3e-30 Identities = 67/119 (56%), Positives = 89/119 (74%), Gaps = 2/119 (1%) Frame = +1
Query: 283 GSVKLAVVRASGDTQDSGS--PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAE 456 G K +VRAS SGS PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L Sbjct: 4 GCKKCTIVRASASADSSGSAAPIAPLQLESPIGQFLSQILISHPHLVPAAVEQQLEQLQT 63
Query: 457 NRTLQDSSTEPSSKGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNL 633 +R ++ E S+ G+ELVLYRRIAE+K ER++ALEEI+Y L+VQKF+ + +S++P + Sbjct: 64 DRDAEEHKEESSASGTELVLYRRIAEVKANERKKALEEILYALVVQKFMDANVSLIPTI 122
>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 434
Score = 134 bits (336), Expect = 6e-30 Identities = 70/121 (57%), Positives = 89/121 (73%) Frame = +1
Query: 265 RLRRNRGSVKLAVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELE 444 R RRN G VRA+G+ +S PIAP Q ESPTGQ+L+QLL+ HPHL+PAAVEQ+LE Sbjct: 74 RSRRNFG------VRAAGNYDESSKPIAPLQLESPTGQFLSQLLKDHPHLLPAAVEQQLE 127
Query: 445 KLAENRTLQDSSTEPSSKGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMV 624 +L +R PSS +ELVLYRRIAE+K ER++ALEEI+Y LIVQKF+ + IS++ Sbjct: 128 RLVADRDAAAQQDPPSSTSTELVLYRRIAEVKAAERRKALEEIMYALIVQKFMDARISLI 187
Query: 625 P 627 P Sbjct: 188 P 188
>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 417
Score = 127 bits (319), Expect = 6e-28 Identities = 63/121 (52%), Positives = 87/121 (71%), Gaps = 4/121 (3%) Frame = +1
Query: 283 GSVKLAVVRASGDTQDSGS----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKL 450 GS + VRAS + S PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L Sbjct: 59 GSRRCMAVRASSSSSSDSSGSIVPIAPLQLESPIGQFLSQILVSHPHLVPAAVEQQLEQL 118
Query: 451 AENRTLQDSSTEPSSKGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPN 630 +R + +PS+ G++LVLYRRIAE K +R++ALEEI+Y L+VQKF+ + +S++P Sbjct: 119 QTDRDSEKQKEDPSATGTDLVLYRRIAEAKANDRRKALEEILYALVVQKFMDANVSLIPT 178
Query: 631 L 633 + Sbjct: 179 I 179
>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 125 bits (313), Expect = 3e-27 Identities = 65/117 (55%), Positives = 89/117 (76%), Gaps = 6/117 (5%) Frame = +1
Query: 301 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 465 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 466 LQDSSTEPSS-KGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNL 633 Q + + +S G+++VLYRRIAELKE ER+R LEEI+Y L+VQKF+ + +S+VP++ Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEILYALVVQKFMEANVSLVPSV 189
>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800; MEB5.2 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1 Length = 421
Score = 125 bits (313), Expect = 3e-27 Identities = 65/117 (55%), Positives = 89/117 (76%), Gaps = 6/117 (5%) Frame = +1
Query: 301 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 465 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 466 LQDSSTEPSS-KGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNL 633 Q + + +S G+++VLYRRIAELKE ER+R LEEI+Y L+VQKF+ + +S+VP++ Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEILYALVVQKFMEANVSLVPSV 189
>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800 OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 125 bits (313), Expect = 3e-27 Identities = 65/117 (55%), Positives = 89/117 (76%), Gaps = 6/117 (5%) Frame = +1
Query: 301 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 465 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 466 LQDSSTEPSS-KGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNL 633 Q + + +S G+++VLYRRIAELKE ER+R LEEI+Y L+VQKF+ + +S+VP++ Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRRTLEEILYALVVQKFMEANVSLVPSV 189
>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana GN=At1g48450 PE=2 SV=1 Length = 423
Score = 124 bits (310), Expect = 6e-27 Identities = 62/112 (55%), Positives = 88/112 (78%), Gaps = 1/112 (0%) Frame = +1
Query: 301 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 480 VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 481 TEPSS-KGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNL 633 + SS G+++VLYRRIAE+KE+ER+RALEEI+Y L+VQKF+ + +++VP++ Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKERRRALEEILYALVVQKFMDANVTLVPSI 180
>tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Arabidopsis thaliana GN=At1g48450 PE=4 SV=1 Length = 342
Score = 124 bits (310), Expect = 6e-27 Identities = 62/112 (55%), Positives = 88/112 (78%), Gaps = 1/112 (0%) Frame = +1
Query: 301 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 480 VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 481 TEPSS-KGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNL 633 + SS G+++VLYRRIAE+KE+ER+RALEEI+Y L+VQKF+ + +++VP++ Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKERRRALEEILYALVVQKFMDANVTLVPSI 180
>tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 401
Score = 121 bits (303), Expect = 4e-26 Identities = 58/112 (51%), Positives = 84/112 (75%) Frame = +1
Query: 298 AVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDS 477 A + +S D+ S + IAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R + Sbjct: 68 ASLSSSSDSSGSIASIAPLQLESPVGQFLSQILISHPHLVPAAVEQQLEQLQTDRDAEKQ 127
Query: 478 STEPSSKGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNL 633 EPS+ ++LVLYR+IAE+K ER++ALEEI+Y L+VQKF+ + +S++ + Sbjct: 128 KEEPSATSTDLVLYRKIAEVKANERRKALEEILYALVVQKFMDANVSLISTM 179
>tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022976001 PE=4 SV=1 Length = 342
Score = 119 bits (299), Expect = 1e-25 Identities = 58/115 (50%), Positives = 85/115 (73%), Gaps = 4/115 (3%) Frame = +1
Query: 301 VVRASG----DTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTL 468 +VRAS D+ +S +PIAP + ESP G++L ++L SHPHLVPAAVE++LE+ +R Sbjct: 10 MVRASATVDNDSYESAAPIAPLRLESPIGRFLTEILISHPHLVPAAVERQLEQFQTDRDA 69
Query: 469 QDSSTEPSSKGSELVLYRRIAELKEQERQRALEEIIYTLIVQKFVGSGISMVPNL 633 + E S+ G EL+LYRRIA++K ER++ALEEI+Y L+VQKFVG+ + ++P + Sbjct: 70 EGHKQESSASGIELLLYRRIAKVKANERKKALEEILYVLVVQKFVGANVPLIPRM 124
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