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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950532
Clone id TST38A01NGRL0008_O13
Library
Length 653
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_O13. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GCTCATATACACTCTCCAGTGGGTGTTGGTGCGGGTGTGCCAACTAGCTTACCAGCTTTT
CATCCGGGAGCTCCAGGAATGGGGCAGCCAATGTTCTATGGTCAGCCTCCTCATGGTTTA
ATGCCACCTCAGCCTGCTGGATACGGGTATCAACAGCAGGTGCTTACAGGGCTACGGCCC
GGTGGGGCACCGATGCCCCCCAACTTTTTTCTACCTATGGTACATCGGCAAGGTCAACAG
GGGCAGAGGCCCATGGGGAGGCGTGGCAATCCACAGCCGCAACAACCACAACCACAACAG
CAGCAGCCACAGACACAGACACAGCAGTTTATGCGCAATAACAATCGGGGAATTCGGTAC
ATGCCAAATGCCCGGAATGCACCAGATGCAGTAGTTGCTCCTCAAGGGATGATGAGTGCG
ATGCTTCCAGTACCTTTGGAGATGGGAGGTATGCCAGTTCCAGCAGCTGATGCTCAACCA
ATACCAATCAATGCCCTGGCGTCCGCACTTGCATCAGCTCCACTCGAGCAACATAGAGTG
ATGTTGGGAGAGCAGCTTTACCCATTAGTTGACCAAATTGAGCACGATCATGCGGGAAAA
GTTACCGGAATGCTNTTGGAGATGGACCAGACCGAGGTGCTACATTTGCTCGA
■■Homology search results ■■ -
sp_hit_id P42731
Definition sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana
Align length 212
Score (bit) 103.0
E-value 6.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950532|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_O13, 5'
         (653 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido...   103   6e-22
sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabido...    85   4e-16
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido...    82   2e-15
sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic ...    62   3e-09
sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=...    55   4e-07
sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B ...    55   4e-07
sp|Q98SP8|EPABA_XENLA Embryonic polyadenylate-binding protein A ...    54   7e-07
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sa...    53   1e-06
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ...    53   2e-06
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no...    52   2e-06
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus...    52   2e-06
sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic ...    52   3e-06
sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenop...    52   3e-06
sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenop...    52   3e-06
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a...    52   3e-06
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa...    52   3e-06
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau...    52   3e-06
sp|Q4VXU2|PAP1L_HUMAN Polyadenylate-binding protein 1-like OS=Ho...    52   4e-06
sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic ...    52   4e-06
sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic ...    51   5e-06
sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic ...    51   6e-06
sp|P21187|PABP_DROME Polyadenylate-binding protein OS=Drosophila...    50   8e-06
sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic ...    50   1e-05
sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic ...    50   1e-05
sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic ...    50   1e-05
sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic ...    50   1e-05
sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic ...    49   2e-05
sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic ...    49   2e-05
sp|Q9H361|PABP3_HUMAN Polyadenylate-binding protein 3 OS=Homo sa...    49   2e-05
sp|Q9ZQA8|PABPX_ARATH Probable polyadenylate-binding protein At2...    47   9e-05

>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2
           OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1
          Length = 629

 Score =  103 bits (258), Expect = 6e-22
 Identities = 76/212 (35%), Positives = 95/212 (44%)
 Frame = +1

Query: 16  PVGVGAGVPTSLPAFHPGAPGMGQPMFYGQPPHGLMXXXXXXXXXXXXVLTGLRPGGAPM 195
           PV +   V   +P + PG PG+GQ MFYGQ P  ++            V  G+RPGG P+
Sbjct: 412 PVAMQPSVGPRMPVYPPGGPGIGQQMFYGQAPPAMIPPQPGYGYQQQLV-PGMRPGGGPV 470

Query: 196 PPNFFLPMVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMRNNNRGIRYMPNAR 375
           P +FF+PMV                                    M    R  RY     
Sbjct: 471 P-SFFMPMVQPQQQRPGGGRRPGGIQHSQQQNPMMQQQ-------MHPRGRMFRYPQGRG 522

Query: 376 NAPDAVVAPQGMMSAMLPVPLEMGGMPVPAADAQPIPINXXXXXXXXXPLEQHRVMLGEQ 555
            + D  V P  M + M   PL +G +    ++A P               EQ R MLGE 
Sbjct: 523 GSGD--VPPYDMGNNM---PLTIGALASNLSNATP---------------EQQRTMLGEV 562

Query: 556 LYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
           LYPLV+Q+E + A KVTGMLLEMDQTEVLHLL
Sbjct: 563 LYPLVEQVEAESAAKVTGMLLEMDQTEVLHLL 594


>sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabidopsis
            thaliana GN=PAB5 PE=2 SV=2
          Length = 668

 Score = 84.7 bits (208), Expect = 4e-16
 Identities = 69/220 (31%), Positives = 91/220 (41%), Gaps = 5/220 (2%)
 Frame = +1

Query: 7    IHSPVGVGAGVPTSLPAFH---PGAPGMG--QPMFYGQPPHGLMXXXXXXXXXXXXVLTG 171
            I SP G  + VP+ +  FH   PG P  G   PMF G    GL+             + G
Sbjct: 420  IRSP-GTMSPVPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPG 478

Query: 172  LRPGGAPMPPNFFLPMVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMRNNNRG 351
            +RPG  P  PNF +P                                       +N +R 
Sbjct: 479  MRPGAGP--PNFMMPF------PLQRQTQPGPRVGFRRGANNMQQQFQQQQMLQQNASRF 530

Query: 352  IRYMPNARNAPDAVVAPQGMMSAMLPVPLEMGGMPVPAADAQPIPINXXXXXXXXXPLEQ 531
            +    N RN  +A  APQG++   L         P  +    P+ I+           ++
Sbjct: 531  MGGAGNRRNGMEAS-APQGIIPLPLNASANSHNAPQRSHKPTPLTISKLASDLALASPDK 589

Query: 532  HRVMLGEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
            H  MLG+ LYPLV+Q E  +A KVTGMLLEMDQ E+LHLL
Sbjct: 590  HPRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLL 629


>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabidopsis
            thaliana GN=PAB3 PE=2 SV=1
          Length = 660

 Score = 82.4 bits (202), Expect = 2e-15
 Identities = 67/211 (31%), Positives = 91/211 (43%), Gaps = 7/211 (3%)
 Frame = +1

Query: 40   PTSLPAFH--PGAPGMGQP--MFYGQPPHGLMXXXXXXXXXXXXVLTGLRPGGAPMPPNF 207
            P  +  FH  PG P  G P  M+ GQ    ++             + G+RPG  P   NF
Sbjct: 427  PGPMSGFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRPGSGP--GNF 484

Query: 208  FLPMVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMRNNNRGIRYM---PNARN 378
             +P                                       RN + G+RYM    N RN
Sbjct: 485  IVPY------PLQRQPQTGPRMGFRRGATNVQQHIQQQQLMHRNPSPGMRYMNGASNGRN 538

Query: 379  APDAVVAPQGMMSAMLPVPLEMGGMPVPAADAQPIPINXXXXXXXXXPLEQHRVMLGEQL 558
              D+ V PQG++  ++P+P++   +    A   PI            P ++ R MLGEQL
Sbjct: 539  GMDSSV-PQGILPPIIPLPIDASSISHQKAPLLPIS-KLTSSLASASPADRTR-MLGEQL 595

Query: 559  YPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
            YPLV++ E  H  KVTGMLLEMDQ E+LHL+
Sbjct: 596  YPLVERHEPLHVAKVTGMLLEMDQAEILHLM 626


>sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1
          Length = 673

 Score = 61.6 bits (148), Expect = 3e-09
 Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = +1

Query: 364 PNARN----APDAVVAPQGMMSAMLPVPLEMGGMPVPAADAQPIPINXXXXXXXXXPLEQ 531
           PNA       P  V APQG+ +  +P   +M   P   A   P                +
Sbjct: 525 PNANGPRNGGPSPVGAPQGLPAGSIPRGGQMPARPHEQAAPAPQAGRLDAQSLARAAPAE 584

Query: 532 HRVMLGEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
            + MLGE LYPL+ + + + AGK+TGMLLEMD  E+LHL+
Sbjct: 585 QKQMLGEALYPLIHETQPELAGKITGMLLEMDNAELLHLV 624


>sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein
           OS=Xenopus tropicalis GN=epabp PE=2 SV=1
          Length = 629

 Score = 54.7 bits (130), Expect = 4e-07
 Identities = 32/81 (39%), Positives = 45/81 (55%)
 Frame = +1

Query: 409 MMSAMLPVPLEMGGMPVPAADAQPIPINXXXXXXXXXPLEQHRVMLGEQLYPLVDQIEHD 588
           +   M P  L  G  P+ A+     P           P EQ + MLGE+LYPL+ ++   
Sbjct: 526 LQQVMEPAVLMQGQEPLTASSLASAP-----------PQEQKQ-MLGERLYPLIHEMHPT 573

Query: 589 HAGKVTGMLLEMDQTEVLHLL 651
            AGK+TGMLLE+D +E+LH+L
Sbjct: 574 LAGKITGMLLEIDNSELLHML 594


>sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B
           OS=Xenopus laevis GN=epabp-B PE=2 SV=1
          Length = 629

 Score = 54.7 bits (130), Expect = 4e-07
 Identities = 22/44 (50%), Positives = 36/44 (81%)
 Frame = +1

Query: 520 PLEQHRVMLGEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
           PL++ + +LGE++YPL+ ++    AGK+TGMLLE+D +E+LH+L
Sbjct: 551 PLQEQKQILGERIYPLIHEMHPTLAGKITGMLLEIDNSELLHML 594


>sp|Q98SP8|EPABA_XENLA Embryonic polyadenylate-binding protein A
           OS=Xenopus laevis GN=epabp-A PE=1 SV=2
          Length = 629

 Score = 53.9 bits (128), Expect = 7e-07
 Identities = 31/99 (31%), Positives = 51/99 (51%)
 Frame = +1

Query: 355 RYMPNARNAPDAVVAPQGMMSAMLPVPLEMGGMPVPAADAQPIPINXXXXXXXXXPLEQH 534
           +Y    RN    +V+   +   M P  L  G  P+ A+                 P ++ 
Sbjct: 509 KYSCGVRNV-QPIVSSTHLQQVMEPAVLMQGQEPLTAS------------LLAGAPPQEQ 555

Query: 535 RVMLGEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
           + MLGE++YP++ ++    AGK+TGMLLE+D +E+LH+L
Sbjct: 556 KQMLGERIYPVIHEMHPTLAGKITGMLLEIDNSELLHML 594


>sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo
           sapiens GN=PABPC4 PE=1 SV=1
          Length = 644

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 22/44 (50%), Positives = 35/44 (79%)
 Frame = +1

Query: 520 PLEQHRVMLGEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
           P ++ + MLGE+L+PL+  +  + AGK+TGMLLE+D +E+LH+L
Sbjct: 563 PPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHML 606


>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2
          Length = 732

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 25/44 (56%), Positives = 32/44 (72%)
 Frame = +1

Query: 520 PLEQHRVMLGEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
           P +Q + MLGE LYP +   + + AGK+TGMLLEMD TE+L LL
Sbjct: 642 PPQQQKQMLGEALYPKIQATQPELAGKITGMLLEMDNTELLGLL 685


>sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus
           norvegicus GN=Pabpc1 PE=2 SV=1
          Length = 636

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 22/44 (50%), Positives = 34/44 (77%)
 Frame = +1

Query: 520 PLEQHRVMLGEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
           P ++ + MLGE+L+PL+  +    AGK+TGMLLE+D +E+LH+L
Sbjct: 554 PPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHML 597
tr_hit_id A9SVZ7
Definition tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 214
Score (bit) 168.0
E-value 2.0e-40
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950532|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_O13, 5'
         (653 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella paten...   168   2e-40
tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella paten...   162   2e-38
tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella paten...   155   3e-36
tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota ...   145   2e-33
tr|Q9M6E4|Q9M6E4_TOBAC Poly(A)-binding protein (Fragment) OS=Nic...   142   1e-32
tr|Q6YYV1|Q6YYV1_ORYSJ Os09g0115400 protein OS=Oryza sativa subs...   142   1e-32
tr|A2YYH2|A2YYH2_ORYSI Putative uncharacterized protein OS=Oryza...   142   1e-32
tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromos...   139   1e-31
tr|A9S664|A9S664_PHYPA Predicted protein OS=Physcomitrella paten...   138   3e-31
tr|Q1EMR9|Q1EMR9_PLAMJ PolyA-binding protein (Fragment) OS=Plant...   132   1e-29
tr|Q9M6E6|Q9M6E6_TOBAC Poly(A)-binding protein OS=Nicotiana taba...   132   2e-29
tr|Q9M6E5|Q9M6E5_TOBAC Poly(A)-binding protein (Fragment) OS=Nic...   132   2e-29
tr|A7QRL0|A7QRL0_VITVI Chromosome undetermined scaffold_151, who...   130   7e-29
tr|A7PLE6|A7PLE6_VITVI Chromosome chr7 scaffold_20, whole genome...   130   9e-29
tr|Q94IQ3|Q94IQ3_ANEPH Polyadenylated mRNA-binding protein 2 (Fr...   129   2e-28
tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativu...   128   3e-28
tr|P93616|P93616_WHEAT Poly(A)-binding protein OS=Triticum aesti...   128   3e-28
tr|A9PEX9|A9PEX9_POPTR Putative uncharacterized protein OS=Popul...   127   5e-28
tr|Q6Z050|Q6Z050_ORYSJ Os08g0314800 protein OS=Oryza sativa subs...   123   9e-27
tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromos...   120   7e-26
tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia ph...   114   5e-24
tr|Q7X675|Q7X675_ORYSA OSJNBa0014K14.19 protein OS=Oryza sativa ...   110   6e-23
tr|Q7F8Y1|Q7F8Y1_ORYSJ Os04g0504800 protein OS=Oryza sativa subs...   110   6e-23
tr|B8ARD0|B8ARD0_ORYSI Putative uncharacterized protein OS=Oryza...   110   6e-23
tr|Q9FXA2|Q9FXA2_ARATH Putative Poly-A Binding Protein OS=Arabid...   104   5e-21
tr|Q8RXR5|Q8RXR5_ARATH Putative poly(A)-binding protein (Fragmen...   103   7e-21
tr|Q9C5J0|Q9C5J0_ARATH Putative poly(A) binding protein OS=Arabi...   100   1e-19
tr|O22173|O22173_ARATH Putative poly(A) binding protein OS=Arabi...   100   1e-19
tr|Q6UUN5|Q6UUN5_ORYSJ Putative poly(A)-binding protein (Putativ...    98   4e-19
tr|B8B9P0|B8B9P0_ORYSI Putative uncharacterized protein OS=Oryza...    98   4e-19

>tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_216291 PE=4 SV=1
          Length = 645

 Score =  168 bits (426), Expect = 2e-40
 Identities = 100/214 (46%), Positives = 113/214 (52%), Gaps = 5/214 (2%)
 Frame = +1

Query: 25   VGAGVPTSLPAFHPGAPGMGQPM-FYGQPPHGLMXXXXXXXXXXXXVLTGLRPGGAPMPP 201
            VG  VPTSLP +HP  PGMG  M +YGQ P G +            ++   RPGGA  P 
Sbjct: 401  VGPAVPTSLPMYHPAGPGMGPGMSYYGQHPPGPIPLQPAAFGYQPQLI---RPGGAQFPN 457

Query: 202  NFFLPMVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMRNNNRGIRYMPNARNA 381
                P V                                     R  NR  RY  NARN 
Sbjct: 458  YMGFPNV------PPLRQGQQGQRAGGRRGGAPQQQQPQQQMIQRGGNRNFRYTTNARNT 511

Query: 382  PDAVVAPQGMMSAMLPVPLEMGGMPVPAADA----QPIPINXXXXXXXXXPLEQHRVMLG 549
            PD  V PQG+M AMLPVP+E+GG+PV  ADA    QP+PI+         P EQ R MLG
Sbjct: 512  PDVAVPPQGIMGAMLPVPIEIGGVPVANADAGVPQQPLPISALASALASAPPEQQRAMLG 571

Query: 550  EQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
            EQLYPLVDQ+EHD AGKVTGMLLEMDQTEVLHL+
Sbjct: 572  EQLYPLVDQLEHDFAGKVTGMLLEMDQTEVLHLI 605


>tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_170712 PE=4 SV=1
          Length = 650

 Score =  162 bits (410), Expect = 2e-38
 Identities = 97/214 (45%), Positives = 115/214 (53%), Gaps = 5/214 (2%)
 Frame = +1

Query: 25   VGAGVPTSLPAFHPGAPGMGQPM-FYGQPPHGLMXXXXXXXXXXXXVLTGLRPGGAPMPP 201
            V   VPTSLP +HPG PGM   M +YGQ P G +            ++   RPGGA  P 
Sbjct: 406  VSPAVPTSLPMYHPG-PGMSPQMPYYGQHPSGPIPLQPAAFGYQPQII---RPGGAQFP- 460

Query: 202  NFFLPMVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMRNNNRGIRYMPNARNA 381
            N+    +                                     R  NR +RY PNARN 
Sbjct: 461  NY----IGYANVPLRQGQQGQRAGGRRGGAPQQQQQQLQQQMIQRGGNRNLRYTPNARNM 516

Query: 382  PDAVVAPQGMMSAMLPVPLEMGGMPVPAADA----QPIPINXXXXXXXXXPLEQHRVMLG 549
            PD  V PQG+M AM+PVPLE+GG+PV   D+    QP+PI+         P EQ R MLG
Sbjct: 517  PDTAVPPQGIMGAMVPVPLEIGGLPVANVDSGVPQQPLPISALASALASAPPEQQRAMLG 576

Query: 550  EQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
            EQLYPLVDQ+EHD+AGKVTGMLLEMDQTEVLHL+
Sbjct: 577  EQLYPLVDQLEHDYAGKVTGMLLEMDQTEVLHLI 610


>tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_108547 PE=4 SV=1
          Length = 647

 Score =  155 bits (391), Expect = 3e-36
 Identities = 96/215 (44%), Positives = 111/215 (51%), Gaps = 6/215 (2%)
 Frame = +1

Query: 25   VGAGVPTSLPAFHPGAPGMGQPM-FYGQPPHGLMXXXXXXXXXXXXVLTGLRPGGAPMPP 201
            VG  VPTSLP +HPG PG+G  M +YGQ P G +            ++   RPGGA +P 
Sbjct: 402  VGPTVPTSLPMYHPG-PGLGPQMPYYGQHPSGPIPLQPAAFGYPPQIM---RPGGAQIPN 457

Query: 202  NFFLPMVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMRNNNRGIRYMPNARNA 381
                P V                                     R  NR  RY PN RNA
Sbjct: 458  YIGYPNVSLSQGQQGQRAGGRRGGAPQQQQQQSQQQM-----IQRGGNRNFRYTPNVRNA 512

Query: 382  PDAVVAP-QGMMSAMLPVPLEMGGMPVPAADA----QPIPINXXXXXXXXXPLEQHRVML 546
             D    P QGMM  MLPVPLE+GGMP    D+    QP+PI+         P +Q R ML
Sbjct: 513  SDGTAPPPQGMMGVMLPVPLEIGGMPAANVDSGVPQQPLPISALASALASAPPDQQRAML 572

Query: 547  GEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
            GEQLYPLVDQ+EH+ AGKVTGMLLEMDQTEVLHL+
Sbjct: 573  GEQLYPLVDQLEHEFAGKVTGMLLEMDQTEVLHLI 607


>tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota PE=2
            SV=1
          Length = 658

 Score =  145 bits (366), Expect = 2e-33
 Identities = 93/214 (43%), Positives = 106/214 (49%), Gaps = 2/214 (0%)
 Frame = +1

Query: 16   PVGVGAGVPTSLPAFHPGAPGMGQPMFYGQPPHGLMXXXXXXXXXXXXVLTGLRPGGAPM 195
            PV +   +   +P + PGAPGMGQ +FYGQ P  ++            V  G+RPGG PM
Sbjct: 416  PVAMPPSMGPRMPMYSPGAPGMGQQLFYGQAPPAMIAPQAGFGYQQQLV-PGMRPGGGPM 474

Query: 196  PPNFFLPMVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMRNNNRGIRY-MPNA 372
            P NFF+PMV                                         RG  Y  P  
Sbjct: 475  P-NFFMPMVQQGQQGQRPGGRRGAGPAQQTQQPVPMMPQQLMP-------RGRMYRFPPG 526

Query: 373  RNAPDAVVAPQGMMSAMLPVPLEMGGM-PVPAADAQPIPINXXXXXXXXXPLEQHRVMLG 549
            RN  D  V   G+   MLPVP  MGGM P  AA  QP+PI          P +Q R MLG
Sbjct: 527  RNVGD--VTMPGVGGGMLPVPYNMGGMLPREAAMGQPMPITALASALANAPADQQRTMLG 584

Query: 550  EQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
            E LYPLVDQ+EHDHA KVTGMLLEMDQTEVLHLL
Sbjct: 585  ENLYPLVDQLEHDHAAKVTGMLLEMDQTEVLHLL 618


>tr|Q9M6E4|Q9M6E4_TOBAC Poly(A)-binding protein (Fragment)
           OS=Nicotiana tabacum GN=PABP PE=2 SV=1
          Length = 479

 Score =  142 bits (359), Expect = 1e-32
 Identities = 90/213 (42%), Positives = 110/213 (51%), Gaps = 1/213 (0%)
 Frame = +1

Query: 16  PVGVGAGVPTSLPAFHPGAPGMGQPMFYGQPPHGLMXXXXXXXXXXXXVLTGLRPGGAPM 195
           PV +   +   +P + PGAPG+GQ +FYGQ P  ++            V  G+RPGGAPM
Sbjct: 236 PVAMPPSLAPRMPIYPPGAPGIGQQLFYGQGPPAMIPPQAGFGYQQQLV-PGMRPGGAPM 294

Query: 196 PPNFFLPMVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMRNNNRGIRYMPNAR 375
           P NFF+P+V                                    M    R  RY P  R
Sbjct: 295 P-NFFMPLVQQGQQGQRPGGRRGAGPVQQTQQPMPLMQQQ-----MLPRGRMYRYPPG-R 347

Query: 376 NAPDAVVAPQGMMSAMLPVPLEMGGM-PVPAADAQPIPINXXXXXXXXXPLEQHRVMLGE 552
           N P+  +   G+   ML VP +MGGM P  +A  QP+PI+         P EQ R MLGE
Sbjct: 348 NGPEGPMP--GVPGGMLSVPYDMGGMLPRDSAMGQPMPISTLASALANAPPEQQRTMLGE 405

Query: 553 QLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
            LYPLVDQ+EH+HA KVTGMLLEMDQTEVLHLL
Sbjct: 406 SLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHLL 438


>tr|Q6YYV1|Q6YYV1_ORYSJ Os09g0115400 protein OS=Oryza sativa subsp.
            japonica GN=OJ1310_F05.15 PE=2 SV=1
          Length = 662

 Score =  142 bits (359), Expect = 1e-32
 Identities = 88/213 (41%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
 Frame = +1

Query: 16   PVGVGAGVPTSLPAFHPGAPGMGQPMFYGQPPHGLMXXXXXXXXXXXXVLTGLRPGGAPM 195
            PV +   V   +P F PG PG+GQ +FYGQPP   +            ++ G+RPG  PM
Sbjct: 416  PVPLAPSVGPRMPMFPPGVPGVGQQLFYGQPPPAFINTQPGFGFQQP-LMPGMRPGAGPM 474

Query: 196  PPNFFLPMVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMRNNNRGIRYMPNAR 375
            P NF +PMV                                    M    RG RY P  R
Sbjct: 475  P-NFIMPMVQQGQQPQRPAGRRAGAGGMQQPMPMGQQQ------MMARGGRGYRY-PTGR 526

Query: 376  NAPDAVVAPQGMMSAMLPVPLEMGGMPV-PAADAQPIPINXXXXXXXXXPLEQHRVMLGE 552
              PD   A  G+   ++P P EMGGMP+  AA +QP+PI            +Q R+MLGE
Sbjct: 527  GMPDP--AMHGVGGGVMPSPYEMGGMPMRDAAASQPVPIGALATALANAAPDQQRMMLGE 584

Query: 553  QLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
             LYPLVDQ+EH+ A KVTGMLLEMDQTEVLHLL
Sbjct: 585  NLYPLVDQLEHEQAAKVTGMLLEMDQTEVLHLL 617


>tr|A2YYH2|A2YYH2_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_30396 PE=4 SV=1
          Length = 662

 Score =  142 bits (359), Expect = 1e-32
 Identities = 88/213 (41%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
 Frame = +1

Query: 16   PVGVGAGVPTSLPAFHPGAPGMGQPMFYGQPPHGLMXXXXXXXXXXXXVLTGLRPGGAPM 195
            PV +   V   +P F PG PG+GQ +FYGQPP   +            ++ G+RPG  PM
Sbjct: 416  PVPLAPSVGPRMPMFPPGVPGVGQQLFYGQPPPAFINTQPGFGFQQP-LMPGMRPGAGPM 474

Query: 196  PPNFFLPMVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMRNNNRGIRYMPNAR 375
            P NF +PMV                                    M    RG RY P  R
Sbjct: 475  P-NFIMPMVQQGQQPQRPAGRRAGAGGMQQPMPMGQQQ------MMARGGRGYRY-PTGR 526

Query: 376  NAPDAVVAPQGMMSAMLPVPLEMGGMPV-PAADAQPIPINXXXXXXXXXPLEQHRVMLGE 552
              PD   A  G+   ++P P EMGGMP+  AA +QP+PI            +Q R+MLGE
Sbjct: 527  GMPDP--AMHGVGGGVMPSPYEMGGMPMRDAAASQPVPIGALATALANAAPDQQRMMLGE 584

Query: 553  QLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
             LYPLVDQ+EH+ A KVTGMLLEMDQTEVLHLL
Sbjct: 585  NLYPLVDQLEHEQAAKVTGMLLEMDQTEVLHLL 617


>tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromosome
            chr18 scaffold_1, whole genome shotgun sequence) OS=Vitis
            vinifera GN=GSVIVT00014861001 PE=4 SV=1
          Length = 640

 Score =  139 bits (351), Expect = 1e-31
 Identities = 88/213 (41%), Positives = 109/213 (51%), Gaps = 1/213 (0%)
 Frame = +1

Query: 16   PVGVGAGVPTSLPAFHPGAPGMGQPMFYGQPPHGLMXXXXXXXXXXXXVLTGLRPGGAPM 195
            PV +   V   +P + PGAPG+GQ +FYGQ P  ++            V  G+RPGGAPM
Sbjct: 394  PVSMAPSVAPRMPMYPPGAPGLGQQLFYGQGPPAIIPPQAGFGYQQQLV-PGMRPGGAPM 452

Query: 196  PPNFFLPMVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMRNNNRGIRYMPNAR 375
            P NFF+P+V                                    +    R  RY P  R
Sbjct: 453  P-NFFVPLVQQGQQGQRPGGRRGAGPVQQNQQPVPLMQQQ----MLPRGGRVYRYPPG-R 506

Query: 376  NAPDAVVAPQGMMSAMLPVPLEMGGMPV-PAADAQPIPINXXXXXXXXXPLEQHRVMLGE 552
            N PD  V   G+   ML +P +MGG+P+  AA  QP+PI+           +Q R MLGE
Sbjct: 507  NMPD--VPMPGVAGGMLSIPYDMGGVPLRDAAIGQPMPISALASALANATPDQQRTMLGE 564

Query: 553  QLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
             LYPLVDQ+EH+ A KVTGMLLEMDQTEVLHLL
Sbjct: 565  SLYPLVDQLEHEMAAKVTGMLLEMDQTEVLHLL 597


>tr|A9S664|A9S664_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124693 PE=4 SV=1
          Length = 153

 Score =  138 bits (348), Expect = 3e-31
 Identities = 68/110 (61%), Positives = 78/110 (70%), Gaps = 4/110 (3%)
 Frame = +1

Query: 334 RNNNRGIRYMPNARNAPDAVVAPQGMMSAMLPVPLEMGGMPV----PAADAQPIPINXXX 501
           R  NR  RY+PNARN PD  V PQG+++ MLPVPLE+GG P     P    QP+PI+   
Sbjct: 4   RGGNRNFRYIPNARNTPDVSVPPQGIINTMLPVPLEIGGAPAANVDPGVPQQPLPISALA 63

Query: 502 XXXXXXPLEQHRVMLGEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
                 P +Q R MLGEQLYPLVDQ+EHD AGKVTGMLLEMDQTEVLHL+
Sbjct: 64  SALASAPPDQQRAMLGEQLYPLVDQLEHDFAGKVTGMLLEMDQTEVLHLI 113


>tr|Q1EMR9|Q1EMR9_PLAMJ PolyA-binding protein (Fragment) OS=Plantago
           major GN=pabp1 PE=2 SV=1
          Length = 314

 Score =  132 bits (333), Expect = 1e-29
 Identities = 88/215 (40%), Positives = 106/215 (49%), Gaps = 3/215 (1%)
 Frame = +1

Query: 16  PVGVGAGVPTSLPAFHPGAPGMGQPMFYGQPPHGLMXXXXXXXXXXXXVLTGLRPGGAPM 195
           PV +   +   +P + PGAPG+GQ +FYGQ P  ++            V  G+RPGG PM
Sbjct: 70  PVAMPPSIAPRMPMYPPGAPGIGQQLFYGQGPPAMIPSQAGFGYQQQLV-PGMRPGGTPM 128

Query: 196 PPNFFLPMVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMRNNNRGIRYMPNAR 375
           P NFF+PMV                                    M    R  R+ P  R
Sbjct: 129 P-NFFMPMVQQGQQGQRPGGRRGGGPMQQAQQPVPVMQQQ-----MMPRGRMYRFPPG-R 181

Query: 376 NAPDAVVAPQGMMSAMLPVPLEMGGMPVP---AADAQPIPINXXXXXXXXXPLEQHRVML 546
           N PD  +   GM S    VP +M GM +P   AA  QP+P+            EQ R ML
Sbjct: 182 NVPDVPMTGGGMFS----VPYDMTGM-LPRDAAAIPQPMPVTALASALANATPEQQRTML 236

Query: 547 GEQLYPLVDQIEHDHAGKVTGMLLEMDQTEVLHLL 651
           GE LYPLVDQ+EH+HA KVTGMLLEMDQTEVLHLL
Sbjct: 237 GENLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHLL 271