DK950538
Clone id TST38A01NGRL0008_O20
Library
Length 639
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_O20. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GGCAGAGCTACTTTGACAGTTACAGGAAATCCAAACCTGACCAATATATGGAGCCTATGG
AGCAAGCAGAGCCAGTTATCGAGCAGGAGGTGATTTGGGACTGGGAGCGGTGGAGGGAAC
ATTTCGTTCAAGTTGAAGAACAAGAGAAGCTTGCAACCACTCTCAAGTTCCAATTAGAAA
GCGCTATTACTGAGGAAAATTTCAAGGAAGCTGCGCGGTTGAAGGAGGCTCTGGAAGAAG
CAACCACATGTGATCCGGTCGCCGAGGTTCTCATTGACCTGAAGTCGGCATTGGAAAATG
AGAGATATGAAACAGCGACAAGGCTCAGAGATGAAGCAGCTGCTGGATTGTTAGGCTGGT
GGGTGGGTTTGGCAAAAGGCGAAAATGATCCTTATGGTCGCATTATCAACATAAGCTCTA
CATTTGGAAGATTCATAGCGAAAGGCTACACTGCAAGGCAACTAGCATCTGCATCTGTTG
GCACTCCATTGTTTGAAGTTTTCATCAGAAAAGATGCCGAAGGTTATCATCAACAGGTGG
TATATTTACAACGAGGTGGTAGCGCAGAGCCTTTATGGGGTGCTCCCACATCATTTGATG
TAAATGTTGATGTAAACATTGTGGATATGAACACAATGG
■■Homology search results ■■ -
sp_hit_id Q93YW0
Definition sp|Q93YW0|EXEC1_ARATH Protein EXECUTER 1, chloroplastic OS=Arabidopsis thaliana
Align length 153
Score (bit) 139.0
E-value 9.0e-33
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950538|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_O20, 5'
(639 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q93YW0|EXEC1_ARATH Protein EXECUTER 1, chloroplastic OS=Arabi... 139 9e-33
sp|Q7UA23|MUTS_SYNPX DNA mismatch repair protein mutS OS=Synecho... 31 6.2

>sp|Q93YW0|EXEC1_ARATH Protein EXECUTER 1, chloroplastic
OS=Arabidopsis thaliana GN=EX1 PE=1 SV=1
Length = 684

Score = 139 bits (351), Expect = 9e-33
Identities = 64/153 (41%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Frame = +3

Query: 96 WDWERWREHFVQVEEQEKLATTLKFQLESAITEENFXXXXXXXXXXXXXTTCDPVAEVLI 275
WDW+RW++HF QV++Q++L + LK QL AI E++ T D V +V+
Sbjct: 111 WDWDRWKKHFDQVDDQDRLLSVLKSQLNRAIKREDYEDAARLKVAIAATATNDAVGKVMS 170

Query: 276 DLKSALENERYETATRLRDEAAAGLLGWWVGLAKGENDPYGRIINISSTFGRFIAKGYTA 455
AL ERY+ A LRD+A AGL+GWW G+++ DP+G I+ I++ GR++A+ Y
Sbjct: 171 TFYRALLEERYKDAVYLRDKAGAGLVGWWSGISEDVKDPFGLIVQITAEHGRYVARSYNP 230

Query: 456 RQLASASVGTPLFEVFIRKDAEG-YHQQVVYLQ 551
RQL++++ G PLFE+F+ D +G Y +Q VYL+
Sbjct: 231 RQLSTSAAGAPLFEIFLTLDGKGNYKKQAVYLK 263


>sp|Q7UA23|MUTS_SYNPX DNA mismatch repair protein mutS
OS=Synechococcus sp. (strain WH8102) GN=mutS PE=3 SV=1
Length = 900

Score = 30.8 bits (68), Expect = 6.2
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +3

Query: 462 LASASVGTPLFEVFIRKDAEGYHQQVVYLQRGGSAEPLWGAPTS 593
LASA V T +V R+D++ HQQ+ L G+AE L P S
Sbjct: 234 LASADVSTGEVQVMQRQDSDALHQQLAQL---GAAELLSSTPES 274


tr_hit_id A9SDF6
Definition tr|A9SDF6|A9SDF6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 197
Score (bit) 180.0
E-value 7.0e-44
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950538|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0008_O20, 5'
(639 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SDF6|A9SDF6_PHYPA Predicted protein OS=Physcomitrella paten... 180 7e-44
tr|A9RX89|A9RX89_PHYPA Predicted protein OS=Physcomitrella paten... 176 1e-42
tr|A7QM35|A7QM35_VITVI Chromosome undetermined scaffold_123, who... 170 8e-41
tr|A7PD17|A7PD17_VITVI Chromosome chr17 scaffold_12, whole genom... 154 3e-36
tr|Q9SXD0|Q9SXD0_ARATH T17H3.1 protein (Fragment) OS=Arabidopsis... 152 2e-35
tr|Q94AT5|Q94AT5_ARATH Putative uncharacterized protein At1g2751... 152 2e-35
tr|Q8L630|Q8L630_ARATH Putative uncharacterized protein At1g2751... 152 2e-35
tr|Q657X6|Q657X6_ORYSJ cDNA clone:J023047F20, full insert sequen... 144 4e-33
tr|A2WJS5|A2WJS5_ORYSI Putative uncharacterized protein OS=Oryza... 144 4e-33
tr|B7ZZV3|B7ZZV3_MAIZE Putative uncharacterized protein OS=Zea m... 144 6e-33
tr|Q8W364|Q8W364_ORYSA Putative uncharacterized protein OSJNBa00... 143 1e-32
tr|Q7XD99|Q7XD99_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 143 1e-32
tr|Q0IWV6|Q0IWV6_ORYSJ Os10g0485300 protein OS=Oryza sativa subs... 143 1e-32
tr|A3C5W0|A3C5W0_ORYSJ Putative uncharacterized protein OS=Oryza... 143 1e-32
tr|A9S7T0|A9S7T0_PHYPA Predicted protein (Fragment) OS=Physcomit... 130 5e-29
tr|A5APW2|A5APW2_VITVI Putative uncharacterized protein OS=Vitis... 93 1e-17
tr|A5BMH7|A5BMH7_VITVI Putative uncharacterized protein OS=Vitis... 74 1e-11
tr|A8IFQ9|A8IFQ9_CHLRE Predicted protein OS=Chlamydomonas reinha... 69 2e-10
tr|Q00SL5|Q00SL5_OSTTA Homology to unknown gene OS=Ostreococcus ... 68 4e-10
tr|A4S9X2|A4S9X2_OSTLU Predicted protein (Fragment) OS=Ostreococ... 61 7e-08
tr|A8JAH7|A8JAH7_CHLRE Putative uncharacterized protein OS=Chlam... 37 0.77
tr|A4TBH6|A4TBH6_MYCGI DNA polymerase III, epsilon subunit OS=My... 35 3.8
tr|A4Z2Q0|A4Z2Q0_BRASO Sensor protein OS=Bradyrhizobium sp. (str... 35 5.0
tr|Q0JZY8|Q0JZY8_RALEH 3-Oxoacyl-[acyl-carrier-protein] reductas... 34 8.6
tr|B3DXK7|B3DXK7_METI4 Glucosamine 6-phosphate synthetase OS=Met... 34 8.6
tr|A5V3K8|A5V3K8_SPHWW Short-chain dehydrogenase/reductase SDR O... 34 8.6

>tr|A9SDF6|A9SDF6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_183711 PE=4 SV=1
Length = 638

Score = 180 bits (456), Expect = 7e-44
Identities = 100/197 (50%), Positives = 125/197 (63%), Gaps = 3/197 (1%)
Frame = +3

Query: 3 QSYFDSYRKSKPDQYMEPMEQAEPVIEQEVIWDWERWREHFVQVEEQEKLATTLKFQLES 182
QSY DSY K ++ E EQE DW RW++ F +VE E LAT LK Q+E
Sbjct: 24 QSYLDSYNSIKTKAEVDDELVPEQETEQES--DWVRWQKVFAEVESCESLATMLKIQMEK 81

Query: 183 AITEENFXXXXXXXXXXXXXTTCDPVAEVLIDLKSALENERYETATRLRDEAAAGLLGWW 362
A+ +E+F T D VA+V+ L+ AL +ERY+ AT LRD+A AGL+GWW
Sbjct: 82 AVEQEDFQSAAKCKAALDAVTEKDIVADVMNGLEQALADERYDDATLLRDKAGAGLVGWW 141

Query: 363 VGLAKGENDPYGRIINISSTFGRFIAKGYTARQLASASVGTPLFEVFIRKDAE-GYHQQV 539
VGLA+G NDPYGRIINI + GR +AKGYTARQLA+A+ G PLFE+FI K+ E Y QQ
Sbjct: 142 VGLAEGGNDPYGRIINIYAAHGRLVAKGYTARQLATAAAGVPLFEIFITKEGERHYGQQA 201

Query: 540 VYLQRGG--SAEPLWGA 584
VYLQR + EP G+
Sbjct: 202 VYLQRDATVTTEPSSGS 218


>tr|A9RX89|A9RX89_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_121059 PE=4 SV=1
Length = 588

Score = 176 bits (446), Expect = 1e-42
Identities = 92/162 (56%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Frame = +3

Query: 72 PVIEQEVIWDWERWREHFVQVEEQEKLATTLKFQLESAITEENFXXXXXXXXXXXXXTTC 251
P E E DWERW++ F +VE E LATTLK QLE A+ +ENF T
Sbjct: 2 PEQESEHESDWERWQKVFAEVETSESLATTLKSQLEKAVEQENFQAAAKCKVALDAVTQK 61

Query: 252 DPVAEVLIDLKSALENERYETATRLRDEAAAGLLGWWVGLAKGENDPYGRIINISSTFGR 431
D VAEV+ LK AL ERY+ AT RD+A AGL+GWWVGLA+G NDPYGRIINI + GR
Sbjct: 62 DVVAEVMNGLKKALAEERYDNATLFRDKAGAGLVGWWVGLAEGGNDPYGRIINIYAAHGR 121

Query: 432 FIAKGYTARQLASASVGTPLFEVFIRKDAE-GYHQQVVYLQR 554
+AKGY+ARQLA+A+ G PLFE+FI K+ E Y Q VYLQR
Sbjct: 122 LVAKGYSARQLATAAAGVPLFEIFITKEGERDYGLQAVYLQR 163


>tr|A7QM35|A7QM35_VITVI Chromosome undetermined scaffold_123, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00001897001 PE=4 SV=1
Length = 702

Score = 170 bits (430), Expect = 8e-41
Identities = 82/193 (42%), Positives = 120/193 (62%), Gaps = 3/193 (1%)
Frame = +3

Query: 6 SYFDSYRKSKPD--QYMEPMEQAEPVIEQEVIWDWERWREHFVQVEEQEKLATTLKFQLE 179
SY +SYR D ++ E+ E++ WDW+RWR+HF +V+EQE++ + LK QL
Sbjct: 100 SYVNSYRNGAKDGRSCVDVAERGNEAAEEDKEWDWDRWRKHFSEVDEQERIVSILKSQLG 159

Query: 180 SAITEENFXXXXXXXXXXXXXTTCDPVAEVLIDLKSALENERYETATRLRDEAAAGLLGW 359
A+ +E++ T D V V+ L A+ ERY+ A +RD A AGL+GW
Sbjct: 160 HAVKKEDYEDAARLKVAIAAAATNDTVGRVMSLLNRAIAEERYDDAAFIRDSAGAGLVGW 219

Query: 360 WVGLAKGENDPYGRIINISSTFGRFIAKGYTARQLASASVGTPLFEVFIRKDAEG-YHQQ 536
W G++ NDPYGRI+ IS+ GR++A+ Y+ RQLA+A+VG PLFE+F+ + G Y QQ
Sbjct: 220 WAGISDDNNDPYGRIVRISAEHGRYVARSYSPRQLATATVGAPLFEIFLTTNKRGEYRQQ 279

Query: 537 VVYLQRGGSAEPL 575
VYL+RGG ++ L
Sbjct: 280 AVYLKRGGLSQDL 292


>tr|A7PD17|A7PD17_VITVI Chromosome chr17 scaffold_12, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00016102001
PE=4 SV=1
Length = 656

Score = 154 bits (390), Expect = 3e-36
Identities = 73/162 (45%), Positives = 104/162 (64%), Gaps = 3/162 (1%)
Frame = +3

Query: 96 WDWERWREHFVQVEEQEKLATTLKFQLESAITEENFXXXXXXXXXXXXXTTCDPVAEVLI 275
WDW +W HF ++E+ E A+ LKFQLE AI E+F + D V E++
Sbjct: 88 WDWNQWSRHFSEIEQAESFASVLKFQLEDAIEREDFEEAAKLKMAIAEAMSMDSVTEIMS 147

Query: 276 DLKSALENERYETATRLRDEAAAGLLGWWVGLAKGENDPYGRIINISSTFGRFIAKGYTA 455
LK+A++ ERY A++L A+GL+GWWVG + +DP+GR+++I+ GRF+ + Y+
Sbjct: 148 QLKNAIDEERYHDASKLCRHTASGLVGWWVGCSADSDDPFGRLVHITPGVGRFVGRSYSP 207

Query: 456 RQLASASVGTPLFEVFIRKDA-EGYHQQVVYLQR--GGSAEP 572
RQL +AS GTPLFE+F+ KD+ E Y QVVYLQR G +A P
Sbjct: 208 RQLVTASAGTPLFEIFVVKDSDEKYIMQVVYLQRAKGSTANP 249


>tr|Q9SXD0|Q9SXD0_ARATH T17H3.1 protein (Fragment) OS=Arabidopsis
thaliana GN=T17H3.1 PE=4 SV=1
Length = 568

Score = 152 bits (383), Expect = 2e-35
Identities = 70/153 (45%), Positives = 100/153 (65%), Gaps = 1/153 (0%)
Frame = +3

Query: 96 WDWERWREHFVQVEEQEKLATTLKFQLESAITEENFXXXXXXXXXXXXXTTCDPVAEVLI 275
WDW+RW HF ++EE E + + LK QLE A+ +E+F T D VAE++
Sbjct: 87 WDWDRWNRHFSEIEEVESVVSLLKSQLEDAVEKEDFEEAVKLKQAISEATVDDAVAEIMR 146

Query: 276 DLKSALENERYETATRLRDEAAAGLLGWWVGLAKGENDPYGRIINISSTFGRFIAKGYTA 455
L++A+ ERY A+RL +E +GL+GWWVGL + +P+GRI++I+ GRFI K Y+
Sbjct: 147 QLQTAVNEERYHDASRLCNETGSGLVGWWVGLPRDSEEPFGRIVHITPGVGRFIGKSYSP 206

Query: 456 RQLASASVGTPLFEVFIRKDAE-GYHQQVVYLQ 551
RQL + + GTPLFE+F+ KD + GY QVVY+Q
Sbjct: 207 RQLVAEAAGTPLFEIFVIKDTDGGYVMQVVYVQ 239


>tr|Q94AT5|Q94AT5_ARATH Putative uncharacterized protein At1g27510
OS=Arabidopsis thaliana GN=At1g27510 PE=2 SV=1
Length = 651

Score = 152 bits (383), Expect = 2e-35
Identities = 70/153 (45%), Positives = 100/153 (65%), Gaps = 1/153 (0%)
Frame = +3

Query: 96 WDWERWREHFVQVEEQEKLATTLKFQLESAITEENFXXXXXXXXXXXXXTTCDPVAEVLI 275
WDW+RW HF ++EE E + + LK QLE A+ +E+F T D VAE++
Sbjct: 87 WDWDRWNRHFSEIEEVESVVSLLKSQLEDAVEKEDFEEAVKLKQAISEATVDDAVAEIMR 146

Query: 276 DLKSALENERYETATRLRDEAAAGLLGWWVGLAKGENDPYGRIINISSTFGRFIAKGYTA 455
L++A+ ERY A+RL +E +GL+GWWVGL + +P+GRI++I+ GRFI K Y+
Sbjct: 147 QLQTAVNEERYHDASRLCNETGSGLVGWWVGLPRDSEEPFGRIVHITPGVGRFIGKSYSP 206

Query: 456 RQLASASVGTPLFEVFIRKDAE-GYHQQVVYLQ 551
RQL + + GTPLFE+F+ KD + GY QVVY+Q
Sbjct: 207 RQLVAEAAGTPLFEIFVIKDTDGGYVMQVVYVQ 239


>tr|Q8L630|Q8L630_ARATH Putative uncharacterized protein At1g27510
(Fragment) OS=Arabidopsis thaliana GN=At1g27510 PE=2
SV=1
Length = 352

Score = 152 bits (383), Expect = 2e-35
Identities = 70/153 (45%), Positives = 100/153 (65%), Gaps = 1/153 (0%)
Frame = +3

Query: 96 WDWERWREHFVQVEEQEKLATTLKFQLESAITEENFXXXXXXXXXXXXXTTCDPVAEVLI 275
WDW+RW HF ++EE E + + LK QLE A+ +E+F T D VAE++
Sbjct: 87 WDWDRWNRHFSEIEEVESVVSLLKSQLEDAVEKEDFEEAVKLKQAISEATVDDAVAEIMR 146

Query: 276 DLKSALENERYETATRLRDEAAAGLLGWWVGLAKGENDPYGRIINISSTFGRFIAKGYTA 455
L++A+ ERY A+RL +E +GL+GWWVGL + +P+GRI++I+ GRFI K Y+
Sbjct: 147 QLQTAVNEERYHDASRLCNETGSGLVGWWVGLPRDSEEPFGRIVHITPGVGRFIGKSYSP 206

Query: 456 RQLASASVGTPLFEVFIRKDAE-GYHQQVVYLQ 551
RQL + + GTPLFE+F+ KD + GY QVVY+Q
Sbjct: 207 RQLVAEAAGTPLFEIFVIKDTDGGYVMQVVYVQ 239


>tr|Q657X6|Q657X6_ORYSJ cDNA clone:J023047F20, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0005A05.36 PE=2 SV=1
Length = 627

Score = 144 bits (363), Expect = 4e-33
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
Frame = +3

Query: 96 WDWERWREHFVQVEEQEKLATTLKFQLESAITEENFXXXXXXXXXXXXXTTCDPVAEVLI 275
WDW RW HF V++ E A+ LKFQLE A+ E+F T D VA+V+
Sbjct: 59 WDWTRWTRHFADVDQAESYASLLKFQLEEAVDNEDFAEASKLKKAILEATGNDAVAQVMS 118

Query: 276 DLKSALENERYETATRLRDEAAAGLLGWWVGLAKGENDPYGRIINISSTFGRFIAKGYTA 455
+LK+A+E +RY+ A+RL A L+GWWVG AK +D GRI+ IS GR++AK ++
Sbjct: 119 ELKTAIEEQRYQDASRLTKLARTNLVGWWVGYAKDTDDSIGRIVRISPGVGRYVAKSFSP 178

Query: 456 RQLASASVGTPLFEVF-IRKDAEGYHQQVVYLQ 551
RQL +AS GTPLFE+F +R D E Y +VV+++
Sbjct: 179 RQLVTASSGTPLFEIFLVRDDDETYTMKVVHMR 211


>tr|A2WJS5|A2WJS5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_00074 PE=4 SV=1
Length = 625

Score = 144 bits (363), Expect = 4e-33
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
Frame = +3

Query: 96 WDWERWREHFVQVEEQEKLATTLKFQLESAITEENFXXXXXXXXXXXXXTTCDPVAEVLI 275
WDW RW HF V++ E A+ LKFQLE A+ E+F T D VA+V+
Sbjct: 57 WDWTRWTRHFADVDQAESYASLLKFQLEEAVDNEDFAEASKLKKAILEATGNDAVAQVMS 116

Query: 276 DLKSALENERYETATRLRDEAAAGLLGWWVGLAKGENDPYGRIINISSTFGRFIAKGYTA 455
+LK+A+E +RY+ A+RL A L+GWWVG AK +D GRI+ IS GR++AK ++
Sbjct: 117 ELKTAIEEQRYQDASRLTKLARTNLVGWWVGYAKDTDDSIGRIVRISPGVGRYVAKSFSP 176

Query: 456 RQLASASVGTPLFEVF-IRKDAEGYHQQVVYLQ 551
RQL +AS GTPLFE+F +R D E Y +VV+++
Sbjct: 177 RQLVTASSGTPLFEIFLVRDDDETYTMKVVHMR 209


>tr|B7ZZV3|B7ZZV3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 627

Score = 144 bits (362), Expect = 6e-33
Identities = 72/162 (44%), Positives = 101/162 (62%), Gaps = 3/162 (1%)
Frame = +3

Query: 96 WDWERWREHFVQVEEQEKLATTLKFQLESAITEENFXXXXXXXXXXXXXTTCDPVAEVLI 275
WDW RW HF +V++ E A+ L+FQLE A+ E+F T D VA V+
Sbjct: 60 WDWTRWSRHFDEVDQAESYASLLQFQLEEAVENEDFAEAAKLKRDIIEATGNDAVAHVMA 119

Query: 276 DLKSALENERYETATRLRDEAAAGLLGWWVGLAKGENDPYGRIINISSTFGRFIAKGYTA 455
+LK+A+E +RY+ A+RL A L+GWWVG AK +D GRI+ IS GR++AK Y
Sbjct: 120 ELKNAIEEQRYQDASRLTRLAGTSLVGWWVGYAKDTDDSIGRIVRISPGVGRYVAKSYNP 179

Query: 456 RQLASASVGTPLFEVF-IRKDAEGYHQQVVYLQ--RGGSAEP 572
RQL +AS GTPLFE+F +++D E Y +VV+++ +G S P
Sbjct: 180 RQLVTASSGTPLFEIFLVKEDDETYTMKVVHMRPTKGTSGAP 221