DK950561 |
Clone id |
TST38A01NGRL0008_P20 |
Library |
TST38 |
Length |
647 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0008_P20. 5' end sequence. |
Accession |
DK950561 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL230Contig1 |
Sequence |
CCAAGGAAAATGGTATGAGATAGCCAACCTTCCGTCGCGTTTCCAACCTAAAGGAGGCAA GAACACAACTGCGACATACACTTTGCAGCCTGATGGTACCATCCATGTCTTGAATGAGAC CTGGCTCGATGGGAAACGAGCCTCCATTGAAGGTTCTGCATGGAAGGTTGATCCCAACAG TGACGAAGCGAAGTTGAAAGTTCGTTTTTGGCTGCCCCCTTTCCTTCCCCTCTTTCCTGT GAATGGCGATTACTGGGTTATGGTCCTTGATTCGGAGTACCGATGGGCTCTCGTCGGCCA GCCCTCAAGGAATTACCTTTGGGTTCTGAGTCGGACCCCACAGTTGAGTGATGATGTATA TGCAGACTTGCTGGCACATGCCGAGAAGGAAGGATATGATGTCTCTCAGGTGAGAAAGAC AATTCAGGATGAAGCTGCTGACTCGAGTAATCTGGAAGTGGCAAAGAAGCTGTCAGATGA TCAGGGCACGTGGTGGCTGAAATCGGTGCTTGGCAAGTAAATGCTCTTTGTATGTGATGA TATCCTGTATTTGTGCGGCCTCATGTTAAGTCATCCTGTTGATAGCTCATTGTATTTTGA AATTGAATTATAAATTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P0A901 |
Definition |
sp|P0A901|BLC_ECOLI Outer membrane lipoprotein blc OS=Escherichia coli (strain K12) |
Align length |
137 |
Score (bit) |
92.4 |
E-value |
2.0e-18 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950561|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0008_P20, 5' (620 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P0A901|BLC_ECOLI Outer membrane lipoprotein blc OS=Escherichi... 92 2e-18 sp|P0A902|BLC_ECO57 Outer membrane lipoprotein blc OS=Escherichi... 92 2e-18 sp|Q46036|BLC_CITFR Outer membrane lipoprotein blc OS=Citrobacte... 90 8e-18 sp|Q08790|BLC_VIBCH Outer membrane lipoprotein blc OS=Vibrio cho... 70 9e-12 sp|Q5URA7|YR877_MIMIV Putative lipocalin R877 OS=Acanthamoeba po... 62 3e-09 sp|P51910|APOD_MOUSE Apolipoprotein D OS=Mus musculus GN=Apod PE... 56 2e-07 sp|P05090|APOD_HUMAN Apolipoprotein D OS=Homo sapiens GN=APOD PE... 55 4e-07 sp|P23593|APOD_RAT Apolipoprotein D OS=Rattus norvegicus GN=Apod... 54 7e-07 sp|Q8SPI0|APOD_MACFA Apolipoprotein D OS=Macaca fascicularis GN=... 54 8e-07 sp|Q32KY0|APOD_BOVIN Apolipoprotein D OS=Bos taurus GN=APOD PE=2... 50 9e-06 sp|P51909|APOD_CAVPO Apolipoprotein D OS=Cavia porcellus GN=APOD... 46 2e-04 sp|P37153|APOD_RABIT Apolipoprotein D OS=Oryctolagus cuniculus G... 45 3e-04 sp|P33433|HRG_BOVIN Histidine-rich glycoprotein (Fragments) OS=B... 39 0.022 sp|P09464|BBP_PIEBR Bilin-binding protein OS=Pieris brassicae PE... 35 0.24 sp|P49291|LAZA_SCHAM Lazarillo protein OS=Schistocerca americana... 35 0.41 sp|P26675|SOS_DROME Protein son of sevenless OS=Drosophila melan... 33 0.91 sp|Q128E7|PYRG_POLSJ CTP synthase OS=Polaromonas sp. (strain JS6... 33 0.91 sp|P70271|PDLI4_MOUSE PDZ and LIM domain protein 4 OS=Mus muscul... 33 1.2 sp|Q9PVZ9|ESR1_SPAAU Estrogen receptor OS=Sparus aurata GN=esr1 ... 33 1.2 sp|Q68EI3|CBPC5_DANRE Cytosolic carboxypeptidase-like protein 5 ... 33 1.2 sp|P50221|MEOX1_HUMAN Homeobox protein MOX-1 OS=Homo sapiens GN=... 33 1.6 sp|P36202|PDLI4_RAT PDZ and LIM domain protein 4 OS=Rattus norve... 32 2.0 sp|Q9UHC6|CNTP2_HUMAN Contactin-associated protein-like 2 OS=Hom... 32 2.6 sp|Q99N23|CAH15_MOUSE Carbonic anhydrase 15 OS=Mus musculus GN=C... 32 2.6 sp|A2R9H9|INO80_ASPNC Putative DNA helicase ino80 OS=Aspergillus... 32 3.5 sp|Q8GXL3|SPL8_ARATH Squamosa promoter-binding-like protein 8 OS... 31 4.5 sp|Q24256|BARH2_DROME Homeobox protein B-H2 OS=Drosophila melano... 31 4.5 sp|P05895|POL_SIVVT Gag-Pol polyprotein OS=Simian immunodeficien... 31 5.9 sp|Q02836|POL_SIVG1 Gag-Pol polyprotein OS=Simian immunodeficien... 31 5.9 sp|Q1ZXC2|PABPA_DICDI Polyadenylate-binding protein 1-A OS=Dicty... 31 5.9
>sp|P0A901|BLC_ECOLI Outer membrane lipoprotein blc OS=Escherichia coli (strain K12) GN=blc PE=1 SV=1 Length = 177
Score = 92.4 bits (228), Expect = 2e-18 Identities = 58/137 (42%), Positives = 80/137 (58%), Gaps = 2/137 (1%) Frame = +2
Query: 5 GKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLD--GKRASIEGSAWKVDPN 178 G WYEIA RF+ +G + TATY+L+ DG ++V+N+ + G EG A+ Sbjct: 41 GTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQSEGKAYFTGAP 99
Query: 179 SDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSRNYLWVLSRTPQLSDDV 358 + A LKV G Y V+ LD EYR ALV P R+YLW+LSRTP +SD+V Sbjct: 100 T-RAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEV 151
Query: 359 YADLLAHAEKEGYDVSQ 409 ++LA A +EG+DVS+ Sbjct: 152 KQEMLAVATREGFDVSK 168
>sp|P0A902|BLC_ECO57 Outer membrane lipoprotein blc OS=Escherichia coli O157:H7 GN=blc PE=3 SV=1 Length = 177
Score = 92.4 bits (228), Expect = 2e-18 Identities = 58/137 (42%), Positives = 80/137 (58%), Gaps = 2/137 (1%) Frame = +2
Query: 5 GKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLD--GKRASIEGSAWKVDPN 178 G WYEIA RF+ +G + TATY+L+ DG ++V+N+ + G EG A+ Sbjct: 41 GTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQSEGKAYFTGAP 99
Query: 179 SDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSRNYLWVLSRTPQLSDDV 358 + A LKV G Y V+ LD EYR ALV P R+YLW+LSRTP +SD+V Sbjct: 100 T-RAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEV 151
Query: 359 YADLLAHAEKEGYDVSQ 409 ++LA A +EG+DVS+ Sbjct: 152 KQEMLAVATREGFDVSK 168
>sp|Q46036|BLC_CITFR Outer membrane lipoprotein blc OS=Citrobacter freundii PE=3 SV=1 Length = 177
Score = 90.1 bits (222), Expect = 8e-18 Identities = 57/139 (41%), Positives = 82/139 (58%), Gaps = 3/139 (2%) Frame = +2
Query: 5 GKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLDGKRA--SIEGSAWKV-DP 175 G WYEIA RF+ +G TATY+L+ DG I+V+N+ + + EG A+ DP Sbjct: 41 GTWYEIARFDHRFE-RGLDKVTATYSLRDDGGINVINKGYNPDREMWQKTEGKAYFTGDP 99
Query: 176 NSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSRNYLWVLSRTPQLSDD 355 ++ A LKV G Y V+ LD EYR ALV P R+YLW+LSRTP +SD+ Sbjct: 100 ST--AALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDE 150
Query: 356 VYADLLAHAEKEGYDVSQV 412 + +LA A +EG++V+++ Sbjct: 151 MKQQMLAIATREGFEVNKL 169
>sp|Q08790|BLC_VIBCH Outer membrane lipoprotein blc OS=Vibrio cholerae GN=blc PE=3 SV=2 Length = 171
Score = 70.1 bits (170), Expect = 9e-12 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 3/139 (2%) Frame = +2
Query: 5 GKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLD--GKRASIEGSAWKVDPN 178 GKWYE+A L F+ +G TA Y ++ DG I VLN + + G+ EG A+ V+ + Sbjct: 36 GKWYEVARLDHSFE-RGLSQVTAEYRVRNDGGISVLNRGYSEEKGEWKEAEGKAYFVNGS 94
Query: 179 SDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSE-YRWALVGQPSRNYLWVLSRTPQLSDD 355 +D LKV G Y V LD E Y +A V P+ YLW+LSRTP + Sbjct: 95 TD-GYLKVSFFGPFY-------GSYVVFELDRENYSYAFVSGPNTEYLWLLSRTPTVERG 146
Query: 356 VYADLLAHAEKEGYDVSQV 412 + + +++ G+D +++ Sbjct: 147 ILDKFIEMSKERGFDTNRL 165
>sp|Q5URA7|YR877_MIMIV Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R877 PE=1 SV=1 Length = 169
Score = 61.6 bits (148), Expect = 3e-09 Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 6/142 (4%) Frame = +2
Query: 5 GKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLDGKRASIEGSAWK------ 166 G WYEIA LP+ FQ KG N+TA Y L I V N ++G+ S+ G+A Sbjct: 35 GTWYEIARLPTSFQ-KGCVNSTANYQLLEPNKIQVTNNCEINGRINSVTGTAIPAANTRI 93
Query: 167 VDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSRNYLWVLSRTPQL 346 V A L V Y V+ +D Y++A+V + LW+LSR + Sbjct: 94 VSGFLTPASLMVNFGYGF--------SPYNVIFIDENYQYAIV-SGGNDTLWILSRFKNI 144
Query: 347 SDDVYADLLAHAEKEGYDVSQV 412 + Y L+ +GYDV+ + Sbjct: 145 NQSTYNQLVTIVYNQGYDVNNL 166
>sp|P51910|APOD_MOUSE Apolipoprotein D OS=Mus musculus GN=Apod PE=2 SV=1 Length = 189
Score = 55.8 bits (133), Expect = 2e-07 Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 8/154 (5%) Frame = +2
Query: 5 GKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLN-ETWLDGKRASIEGSAWKVDPNS 181 G+WYEI +P+ F+ G A Y+L +G I VLN E DG ++G A K S Sbjct: 44 GRWYEIEKIPASFEK--GNCIQANYSLMENGNIEVLNKELSPDGTMNQVKGEA-KQSNVS 100
Query: 182 DEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSR-------NYLWVLSRTP 340 + AKL+V+ YW++ D E +ALV + +++W+L R P Sbjct: 101 EPAKLEVQFFPLMPP------APYWILATDYE-NYALVYSCTTFFWLFHVDFVWILGRNP 153
Query: 341 QLSDDVYADLLAHAEKEGYDVSQVRKTIQDEAAD 442 L + L G D+ ++ T Q D Sbjct: 154 YLPPETITYLKDILTSNGIDIEKMTTTDQANCPD 187
>sp|P05090|APOD_HUMAN Apolipoprotein D OS=Homo sapiens GN=APOD PE=1 SV=1 Length = 189
Score = 54.7 bits (130), Expect = 4e-07 Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 8/149 (5%) Frame = +2
Query: 5 GKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLN-ETWLDGKRASIEGSAWKVDPNS 181 G+WYEI +P+ F+ G+ A Y+L +G I VLN E DG IEG A V+ + Sbjct: 44 GRWYEIEKIPTTFE--NGRCIQANYSLMENGKIKVLNQELRADGTVNQIEGEATPVN-LT 100
Query: 182 DEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPS-------RNYLWVLSRTP 340 + AKL+V+ + YW++ D E +ALV + ++ W+L+R P Sbjct: 101 EPAKLEVKFSWFMP------SAPYWILATDYE-NYALVYSCTCIIQLFHVDFAWILARNP 153
Query: 341 QLSDDVYADLLAHAEKEGYDVSQVRKTIQ 427 L + L DV ++ T Q Sbjct: 154 NLPPETVDSLKNILTSNNIDVKKMTVTDQ 182
>sp|P23593|APOD_RAT Apolipoprotein D OS=Rattus norvegicus GN=Apod PE=1 SV=1 Length = 189
Score = 53.9 bits (128), Expect = 7e-07 Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 8/152 (5%) Frame = +2
Query: 5 GKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLN-ETWLDGKRASIEGSAWKVDPNS 181 G+WYEI +P F+ G A Y+L +G I VLN E DG +EG A K S Sbjct: 44 GRWYEIEKIPVSFEK--GNCIQANYSLMENGNIKVLNKELRPDGTLNQVEGEA-KQSNMS 100
Query: 182 DEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSR-------NYLWVLSRTP 340 + AKL+V+ YW++ D E +ALV + +Y+W+L R P Sbjct: 101 EPAKLEVQFFSLMPP------APYWILATDYE-SYALVYSCTTFFWFFHVDYVWILGRNP 153
Query: 341 QLSDDVYADLLAHAEKEGYDVSQVRKTIQDEA 436 L + L D++++ T +D+A Sbjct: 154 YLPPETITYLKYILTSNDIDIAKI--TTKDQA 183
>sp|Q8SPI0|APOD_MACFA Apolipoprotein D OS=Macaca fascicularis GN=APOD PE=2 SV=1 Length = 189
Score = 53.5 bits (127), Expect = 8e-07 Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 8/156 (5%) Frame = +2
Query: 5 GKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLN-ETWLDGKRASIEGSAWKVDPNS 181 G+WYEI +P+ F+ G+ A Y+L+ +G I VLN E DG IEG A V+ + Sbjct: 44 GRWYEIEKIPTTFEK--GRCIQANYSLKENGKIKVLNQELRADGTVNQIEGEASPVN-IT 100
Query: 182 DEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSR-------NYLWVLSRTP 340 + AKL+V+ + YWV+ D E +ALV +Y W+L+R Sbjct: 101 EPAKLEVKFFWFMP------SAPYWVLATDYE-NYALVYSCVSIINLFRVDYAWILARNR 153
Query: 341 QLSDDVYADLLAHAEKEGYDVSQVRKTIQDEAADSS 448 L + L DV ++ T Q+ + S Sbjct: 154 HLPSETVDFLKNILTSNNIDVKKMTVTDQENCPEFS 189
>sp|Q32KY0|APOD_BOVIN Apolipoprotein D OS=Bos taurus GN=APOD PE=2 SV=1 Length = 189
Score = 50.1 bits (118), Expect = 9e-06 Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 8/155 (5%) Frame = +2
Query: 5 GKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLN-ETWLDGKRASIEGSAWKVDPNS 181 GKWYEI +P F+ G A Y+L+ +G + V+N E DG IEG A + + Sbjct: 44 GKWYEIEKIPVSFEK--GSCIQANYSLKENGNVEVINKELRADGTVNQIEGEA-TPENIT 100
Query: 182 DEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPS-------RNYLWVLSRTP 340 + AKL V+ + YWV+ D E +ALV + +++W+L R P Sbjct: 101 EPAKLAVKFFWFMP------SAPYWVLATDYE-NYALVYSCTTIIWLFHMDHVWILGRNP 153
Query: 341 QLSDDVYADLLAHAEKEGYDVSQVRKTIQDEAADS 445 L + L +V ++ T Q +S Sbjct: 154 YLPPETVTYLKDILTSNNIEVEKMTITDQVNCPES 188
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q38JD1 |
Definition |
tr|Q38JD1|Q38JD1_PHYPA Temperature-induced lipocalin OS=Physcomitrella patens |
Align length |
172 |
Score (bit) |
207.0 |
E-value |
5.0e-52 |
Report |
 |