DK950567 |
Clone id |
TST38A01NGRL0009_A02 |
Library |
TST38 |
Length |
771 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_A02. 5' end sequence. |
Accession |
DK950567 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1461Contig1 |
Sequence |
GCAAGTCCCCCTTTGGTTCCCGTTGAACATCGTCTCAGGAGGAAGTATGGCCAAGATGGT TGTTGGAGCTATGGGTAATAACTGGGGAAGGAGCATGGCAGAAGGCACACTTACTCGTGA CCTTGGCAAGGCCCTTTATAAGGATGAAAGAGCGATCAGGATGACAGCACTCAAGGCTCA TTCAATGCTGAAAAATGCGAAGGAGTTGGAGTTCGGCTTTAAAATTGTGAACATGGATGA CCAAAAGTCAGCATTCATGCCATCCAATGTTATAAAAATTCCACCTAAAGAAGAACTGAA AACTCCTCTAGACAAGGTGAAGGATTTCTTTGGAGATAACCTTGGGGGAGTAAAAGACGC TTTCAACGGCTTGAAATTAGGGGATCAGGATTCAGAAAGTGCCTCAAACGATTCCAAATG AATGTAAAGTCCGGGCTCCGCAAGAAGGATCTATGCCCGCATCAACACCCGAGGGGCAAT CGACTACTAAGGTTGTATGGAGGTTGCAGCAATGAAGCTGCCATGCAATTTCATGCATGT ATTGTATTTTTGGAGGGCATTCAGTTGCAGCTTCAGCTAGTTGTGATTGGCCAACACAGG GTTGAAAGGCTAATTTTTGAGGCATGGGCAATTCTTCTATTTCGTCAAAGCAAGTGGTCT CTTTGTACAGCTTAACTAGAATCGGACATCACTGTGTTGCGGGAAATATACCTATTGAAA TTTTTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P26257 |
Definition |
sp|P26257|BGAL_THETU Beta-galactosidase OS=Thermoanaerobacter thermosulfurogenes |
Align length |
107 |
Score (bit) |
32.3 |
E-value |
2.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SHC4 |
Definition |
tr|A9SHC4|A9SHC4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
141 |
Score (bit) |
130.0 |
E-value |
9.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950567|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_A02, 5' (728 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SHC4|A9SHC4_PHYPA Predicted protein OS=Physcomitrella paten... 130 9e-29 tr|A9NR72|A9NR72_PICSI Putative uncharacterized protein OS=Picea... 127 8e-28 tr|Q6K5H8|Q6K5H8_ORYSJ Os02g0600200 protein OS=Oryza sativa subs... 112 2e-23 tr|B8AF05|B8AF05_ORYSI Putative uncharacterized protein OS=Oryza... 112 2e-23 tr|B4FAM1|B4FAM1_MAIZE Putative uncharacterized protein OS=Zea m... 112 2e-23 tr|A3BP92|A3BP92_ORYSJ Putative uncharacterized protein OS=Oryza... 112 2e-23 tr|A7QBU7|A7QBU7_VITVI Chromosome chr1 scaffold_75, whole genome... 109 2e-22 tr|Q94A67|Q94A67_ARATH At1g67700/F12A21_30 OS=Arabidopsis thalia... 108 4e-22 tr|Q8LDL0|Q8LDL0_ARATH Putative uncharacterized protein OS=Arabi... 108 4e-22 tr|A9PH90|A9PH90_POPTR Putative uncharacterized protein OS=Popul... 107 6e-22 tr|Q9FXD5|Q9FXD5_ARATH F12A21.16 OS=Arabidopsis thaliana PE=3 SV=1 96 2e-18 tr|A4RRI0|A4RRI0_OSTLU Predicted protein OS=Ostreococcus lucimar... 96 2e-18 tr|Q01G48|Q01G48_OSTTA Metalloendopeptidase family-saccharolysin... 94 7e-18 tr|A8J2X8|A8J2X8_CHLRE Predicted protein OS=Chlamydomonas reinha... 55 6e-06 tr|A2X6W5|A2X6W5_ORYSI Putative uncharacterized protein OS=Oryza... 50 1e-04 tr|Q8IBY9|Q8IBY9_PLAF7 Putative uncharacterized protein PF07_004... 40 0.21 tr|B6M6Q5|B6M6Q5_BRAFL Putative uncharacterized protein OS=Branc... 36 2.3 tr|B8FGF4|B8FGF4_9DELT Radical SAM domain protein OS=Desulfatiba... 35 6.6 tr|A3ZYM0|A3ZYM0_9PLAN Putative uncharacterized protein OS=Blast... 35 6.6 tr|B5RRJ2|B5RRJ2_BORRA Basic membrane protein A; lipoprotein OS=... 34 8.6 tr|B5RLU4|B5RLU4_BORDL Basic membrane protein A OS=Borrelia dutt... 34 8.6
>tr|A9SHC4|A9SHC4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129970 PE=4 SV=1 Length = 209
Score = 130 bits (327), Expect = 9e-29 Identities = 63/141 (44%), Positives = 96/141 (68%), Gaps = 3/141 (2%) Frame = +2
Query: 5 VPLWFPLNIVSGGSMAKMVVGAMGNNWGRSMAEGTLTRDLGKALYKDERAIRMTALKAHS 184 VP W+PL++V+GG+ AKM+VGAM N+WG+ + EGTLTR++ +YKDE+ I TA+K + Sbjct: 73 VPRWYPLSVVTGGTTAKMMVGAMKNDWGKKLYEGTLTRNIAGVIYKDEKKIIQTAIKQYP 132
Query: 185 MLKNAKELEFGFKIVNMDDQKSAFMPSNVIKIPPKEELKTPLDKVKDFF---GDNLGGVK 355 +LK+A ++G+KI++ + +SA S+V+ IPP+EEL + +DKVK FF G++ G + Sbjct: 133 VLKSATGFQYGYKIMDPEKPQSAMFSSDVVTIPPQEELNSVVDKVKGFFSKVGESFGSI- 191
Query: 356 DAFNGLKLGDQDSESASNDSK 418 L G QD S D+K Sbjct: 192 ---GSLPAGSQDQAGQSKDNK 209
>tr|A9NR72|A9NR72_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 232
Score = 127 bits (319), Expect = 8e-28 Identities = 60/131 (45%), Positives = 91/131 (69%) Frame = +2
Query: 5 VPLWFPLNIVSGGSMAKMVVGAMGNNWGRSMAEGTLTRDLGKALYKDERAIRMTALKAHS 184 VP W+PLNI+SGG+ AK++V G+ + EG LTR++ +YKDE+ IR ALK + Sbjct: 94 VPRWYPLNIISGGTTAKIMVAGKDTPVGKFLYEGALTRNIAAVVYKDEKEIRKIALKQYP 153
Query: 185 MLKNAKELEFGFKIVNMDDQKSAFMPSNVIKIPPKEELKTPLDKVKDFFGDNLGGVKDAF 364 +LK A EL++G+K+++ + SA S++IKIPP+EELK ++KVKDFFG+ + GVK++F Sbjct: 154 VLKAASELQYGYKLIDPKNPNSALYSSDIIKIPPQEELKPVVEKVKDFFGNAMTGVKESF 213
Query: 365 NGLKLGDQDSE 397 + D +E Sbjct: 214 GSISNLDTGAE 224
>tr|Q6K5H8|Q6K5H8_ORYSJ Os02g0600200 protein OS=Oryza sativa subsp. japonica GN=OJ1791_B03.17-1 PE=2 SV=1 Length = 266
Score = 112 bits (280), Expect = 2e-23 Identities = 56/120 (46%), Positives = 80/120 (66%) Frame = +2
Query: 5 VPLWFPLNIVSGGSMAKMVVGAMGNNWGRSMAEGTLTRDLGKALYKDERAIRMTALKAHS 184 V W+PLNIV+GG+ AK+++ A N G+ + + TL R+L +YKDE I TA + + Sbjct: 101 VYFWYPLNIVTGGTTAKIMLAAKDNFLGKYIYKDTLARNLAAVIYKDEDDIIDTAKEQYR 160
Query: 185 MLKNAKELEFGFKIVNMDDQKSAFMPSNVIKIPPKEELKTPLDKVKDFFGDNLGGVKDAF 364 +LK E +G+K+V + +SA SNVI++P KEELKT +DKVKDFFGD G K++F Sbjct: 161 VLKTDNEFRYGYKVVENGNLRSALTTSNVIELPKKEELKTVVDKVKDFFGDVTSGAKESF 220
>tr|B8AF05|B8AF05_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07935 PE=4 SV=1 Length = 300
Score = 112 bits (280), Expect = 2e-23 Identities = 56/120 (46%), Positives = 80/120 (66%) Frame = +2
Query: 5 VPLWFPLNIVSGGSMAKMVVGAMGNNWGRSMAEGTLTRDLGKALYKDERAIRMTALKAHS 184 V W+PLNIV+GG+ AK+++ A N G+ + + TL R+L +YKDE I TA + + Sbjct: 101 VYFWYPLNIVTGGTTAKIMLAAKDNFLGKYIYKDTLARNLAAVIYKDEDDIIDTAKEQYR 160
Query: 185 MLKNAKELEFGFKIVNMDDQKSAFMPSNVIKIPPKEELKTPLDKVKDFFGDNLGGVKDAF 364 +LK E +G+K+V + +SA SNVI++P KEELKT +DKVKDFFGD G K++F Sbjct: 161 VLKTDNEFRYGYKVVENGNLRSALTTSNVIELPKKEELKTVVDKVKDFFGDVTSGAKESF 220
>tr|B4FAM1|B4FAM1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 249
Score = 112 bits (280), Expect = 2e-23 Identities = 56/139 (40%), Positives = 88/139 (63%), Gaps = 3/139 (2%) Frame = +2
Query: 5 VPLWFPLNIVSGGSMAKMVVGAMGNNWGRSMAEGTLTRDLGKALYKDERAIRMTALKAHS 184 V W+PLNI++GG+ AK+++ A N G+ + + TL R+L +YKDE I TA + + Sbjct: 90 VYFWYPLNIITGGTTAKIMLAAKDNFLGKYIYKDTLARNLAAVIYKDEDVIIDTAKEQYR 149
Query: 185 MLKNAKELEFGFKIVNMDDQKSAFMPSNVIKIPPKEELKTPLDKVKDFFGDNLGGVKDAF 364 +LK + +G+K+V + +SA SNVI++P K+ELKT +DKVKDFFGD G K++F Sbjct: 150 VLKTENQFRYGYKVVEKGNIRSALTTSNVIELPKKDELKTVVDKVKDFFGDVTAGAKESF 209
Query: 365 ---NGLKLGDQDSESASND 412 G + ++ E+ S + Sbjct: 210 AQITGSAVSKEEEEAESKE 228
>tr|A3BP92|A3BP92_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_024864 PE=3 SV=1 Length = 604
Score = 112 bits (280), Expect = 2e-23 Identities = 56/120 (46%), Positives = 80/120 (66%) Frame = +2
Query: 5 VPLWFPLNIVSGGSMAKMVVGAMGNNWGRSMAEGTLTRDLGKALYKDERAIRMTALKAHS 184 V W+PLNIV+GG+ AK+++ A N G+ + + TL R+L +YKDE I TA + + Sbjct: 405 VYFWYPLNIVTGGTTAKIMLAAKDNFLGKYIYKDTLARNLAAVIYKDEDDIIDTAKEQYR 464
Query: 185 MLKNAKELEFGFKIVNMDDQKSAFMPSNVIKIPPKEELKTPLDKVKDFFGDNLGGVKDAF 364 +LK E +G+K+V + +SA SNVI++P KEELKT +DKVKDFFGD G K++F Sbjct: 465 VLKTDNEFRYGYKVVENGNLRSALTTSNVIELPKKEELKTVVDKVKDFFGDVTSGAKESF 524
>tr|A7QBU7|A7QBU7_VITVI Chromosome chr1 scaffold_75, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035114001 PE=4 SV=1 Length = 226
Score = 109 bits (273), Expect = 2e-22 Identities = 55/139 (39%), Positives = 92/139 (66%), Gaps = 3/139 (2%) Frame = +2
Query: 5 VPLWFPLNIVSGGSMAKMVVGAMGNNWGRSMAEGTLTRDLGKALYKDERAIRMTALKAHS 184 V LW+PL++++GG+ AK++V A N G+ + T+ R+L +YKDE+ I+ TA + + Sbjct: 89 VYLWYPLSLITGGTTAKIMVAAKDNFLGKYIYRDTIARNLAAVIYKDEKEIQKTAFRQYR 148
Query: 185 MLKNAKELEFGFKIVNMDDQKSAFMPSNVIKIPPKEELKTPLDKVKDFFGDNLGGVKDAF 364 +L++AKE +G+K+V ++ +SA ++VI++P + ELKT LDKV+DFFGD K++F Sbjct: 149 VLRSAKEFRYGYKLVENNNVRSALSTTDVIELPTQGELKTVLDKVRDFFGD----AKESF 204
Query: 365 ---NGLKLGDQDSESASND 412 L ++SE SN+ Sbjct: 205 GKLTALNSTTEESEQMSNE 223
>tr|Q94A67|Q94A67_ARATH At1g67700/F12A21_30 OS=Arabidopsis thaliana GN=At1g67700 PE=2 SV=1 Length = 230
Score = 108 bits (270), Expect = 4e-22 Identities = 52/141 (36%), Positives = 91/141 (64%), Gaps = 3/141 (2%) Frame = +2
Query: 5 VPLWFPLNIVSGGSMAKMVVGAMGNNWGRSMAEGTLTRDLGKALYKDERAIRMTALKAHS 184 V LW+PL+I++GG+ AK++V A N G+ + + T+ R++ +Y+DE+ I+ TA+K H Sbjct: 92 VYLWYPLSIIAGGTTAKIMVAAKDNLLGKYIYKDTIARNIAAVIYRDEKEIQKTAIKQHR 151
Query: 185 MLKNAKELEFGFKIVNMDDQKSAFMPSNVIKIPPKEELKTPLDKVKDFFGDNLGGVKDAF 364 +L+ A E +G+K+V + ++A S+VI++P +++LKT DKVKD+FGD K++F Sbjct: 152 VLRTATEFRYGYKLVENGNMRAALSTSDVIELPTQDQLKTVFDKVKDYFGD----AKESF 207
Query: 365 ---NGLKLGDQDSESASNDSK 418 + L G + ++D K Sbjct: 208 GKLSSLNPGSDEKTEETSDEK 228
>tr|Q8LDL0|Q8LDL0_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 231
Score = 108 bits (270), Expect = 4e-22 Identities = 52/141 (36%), Positives = 91/141 (64%), Gaps = 3/141 (2%) Frame = +2
Query: 5 VPLWFPLNIVSGGSMAKMVVGAMGNNWGRSMAEGTLTRDLGKALYKDERAIRMTALKAHS 184 V LW+PL+I++GG+ AK++V A N G+ + + T+ R++ +Y+DE+ I+ TA+K H Sbjct: 92 VYLWYPLSIIAGGTTAKIMVAAKDNLLGKYIYKDTIARNIAAVIYRDEKEIQKTAIKQHR 151
Query: 185 MLKNAKELEFGFKIVNMDDQKSAFMPSNVIKIPPKEELKTPLDKVKDFFGDNLGGVKDAF 364 +L+ A E +G+K+V + ++A S+VI++P +++LKT DKVKD+FGD K++F Sbjct: 152 VLRTATEFRYGYKLVENGNMRAALSTSDVIELPTQDQLKTVFDKVKDYFGD----AKESF 207
Query: 365 ---NGLKLGDQDSESASNDSK 418 + L G + ++D K Sbjct: 208 GKLSSLNPGSDEKTEETSDEK 228
>tr|A9PH90|A9PH90_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 237
Score = 107 bits (268), Expect = 6e-22 Identities = 52/123 (42%), Positives = 85/123 (69%) Frame = +2
Query: 5 VPLWFPLNIVSGGSMAKMVVGAMGNNWGRSMAEGTLTRDLGKALYKDERAIRMTALKAHS 184 V LW+PL++++GG+ AK++V A N G+ + + TL R+L +YKDE+ I+ TA K H Sbjct: 99 VYLWYPLSLITGGTTAKIMVAAKDNFLGKYIYKDTLARNLAAVIYKDEKEIQKTAFKQHR 158
Query: 185 MLKNAKELEFGFKIVNMDDQKSAFMPSNVIKIPPKEELKTPLDKVKDFFGDNLGGVKDAF 364 +L++A E +G+K+V + ++A ++VI++P +++LKT LDKVKDFFGD K++F Sbjct: 159 VLRSATEFRYGYKLVENGNLRAALSITDVIELPTQDKLKTVLDKVKDFFGD----AKESF 214
Query: 365 NGL 373 L Sbjct: 215 GKL 217
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