DK950570 |
Clone id |
TST38A01NGRL0009_A06 |
Library |
TST38 |
Length |
682 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_A06. 5' end sequence. |
Accession |
DK950570 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GGTGGCTATGGCGACGCTAGAGCTACCGCTGCAAGTGCAAACGACAGTTTGCAAGTCTGC TAGTGGATTCGCGGGCAAGGAATGCTGCGTGGTTCGGATGCGCTTTGCTCCCCCTAGCGG GTCGGGGTCTTCTCTCTCCCTAAGTTGCAAAGATGTCCGAAGCCGCATACCTCGCTGCAT GTCAGTAGATGTGGAGAGCGATTCTGCACAAACATCTGCCGAGCCCGATCCTCAGTCTGT TGAGGCCAGAAGAGCGGCTGAAAAATTTGCAGTGATAAACACGGGTAAGTGGGAGTGCCG GTCATGTGGCTACGTATATGAGGAGTCGAAGGGGGAGGCAGCATACCCCATTGCAGCAGG AACAGAATTTCGAAACTTACCAGAAGATTGGCGATGCCCCATATGCGGTGCAGGGCAGTC TTATTTTAACTCCAAGAGTGTGGAGGTAGCTGGATTTGCTGAGAATCAAAATTATGGGCT TGGCACAAACTCCCTCACATCGGGCCAGAAGAGCCTCCTCATTTATGGTTCTCTTCTTCT CTTCTTTTGTCTCTTTCTCTCTGGCTATTTTCTGCAATAGGCTGGAACTTCTTGTATGTA TACTTCTTGGTTGTTTCTGATAATCTTGTCGTATTGTATTCTCAAGGCAGCAACAAAAGA GTTTTTTGTTCTTGTTTTTGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9XBL8 |
Definition |
sp|Q9XBL8|RUBR_ANAVT Rubredoxin OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) |
Align length |
89 |
Score (bit) |
87.8 |
E-value |
5.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7FGT1 |
Definition |
tr|B7FGT1|B7FGT1_MEDTR Putative uncharacterized protein OS=Medicago truncatula |
Align length |
114 |
Score (bit) |
148.0 |
E-value |
3.0e-34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950570|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_A06, 5' (682 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B7FGT1|B7FGT1_MEDTR Putative uncharacterized protein OS=Medic... 148 3e-34 tr|A5B456|A5B456_VITVI Putative uncharacterized protein OS=Vitis... 148 3e-34 tr|A9S9R0|A9S9R0_PHYPA Predicted protein OS=Physcomitrella paten... 148 4e-34 tr|B8LMH7|B8LMH7_PICSI Putative uncharacterized protein OS=Picea... 145 2e-33 tr|Q9SLI4|Q9SLI4_ARATH F20D21.31 protein (Rubredoxin, putative) ... 143 9e-33 tr|Q6Z0E5|Q6Z0E5_ORYSJ Os08g0323400 protein OS=Oryza sativa subs... 139 1e-31 tr|A2YU61|A2YU61_ORYSI Putative uncharacterized protein OS=Oryza... 139 1e-31 tr|A9RUZ4|A9RUZ4_PHYPA Predicted protein OS=Physcomitrella paten... 135 2e-30 tr|Q0GBX1|Q0GBX1_MUSAC Putative rubredoxin (Fragment) OS=Musa ac... 119 2e-25 tr|A8I686|A8I686_CHLRE Rubredoxin OS=Chlamydomonas reinhardtii G... 117 7e-25 tr|Q014H1|Q014H1_OSTTA Rubredoxin, putative (ISS) OS=Ostreococcu... 115 3e-24 tr|A3BRW7|A3BRW7_ORYSJ Putative uncharacterized protein OS=Oryza... 112 2e-23 tr|Q15GC0|Q15GC0_RHDSA Rubredoxin (Fragment) OS=Rhodomonas salin... 108 2e-22 tr|A4S0S4|A4S0S4_OSTLU Predicted protein (Fragment) OS=Ostreococ... 104 5e-21 tr|Q7XZ41|Q7XZ41_GRIJA Rubredoxin OS=Griffithsia japonica PE=2 SV=1 103 1e-20 tr|A9BKV4|A9BKV4_9CRYP Rub OS=Cryptophyta GN=HAN_2g287 PE=4 SV=1 103 1e-20 tr|Q9XG40|Q9XG40_GUITH Rubredoxin OS=Guillardia theta GN=rub PE=... 99 3e-19 tr|Q8KPP5|Q8KPP5_SYNE7 Rubredoxin OS=Synechococcus elongatus (st... 98 6e-19 tr|Q5N558|Q5N558_SYNP6 Rubredoxin OS=Synechococcus sp. (strain A... 98 6e-19 tr|B4W447|B4W447_9CYAN Rubredoxin, putative OS=Microcoleus chtho... 97 1e-18 tr|B7KH64|B7KH64_9CHRO Rubredoxin-type Fe(Cys)4 protein OS=Cyano... 94 1e-17 tr|B8HVD5|B8HVD5_9CHRO Rubredoxin-type Fe(Cys)4 protein OS=Cyano... 92 4e-17 tr|B4B7A8|B4B7A8_9CHRO Rubredoxin-type Fe(Cys)4 protein OS=Cyano... 92 4e-17 tr|Q2JW19|Q2JW19_SYNJA Rubredoxin OS=Synechococcus sp. (strain J... 91 5e-17 tr|B7K628|B7K628_SYNP8 Rubredoxin-type Fe(Cys)4 protein OS=Synec... 91 7e-17 tr|B4BU19|B4BU19_9CHRO Rubredoxin-type Fe(Cys)4 protein OS=Cyano... 91 7e-17 tr|A0YVX6|A0YVX6_9CYAN Rubredoxin OS=Lyngbya sp. PCC 8106 GN=L81... 90 1e-16 tr|Q2JJR2|Q2JJR2_SYNJB Rubredoxin OS=Synechococcus sp. (strain J... 90 2e-16 tr|B0JLV5|B0JLV5_MICAN Rubredoxin OS=Microcystis aeruginosa (str... 90 2e-16 tr|B4WIH9|B4WIH9_9SYNE Rubredoxin, putative OS=Synechococcus sp.... 89 2e-16
>tr|B7FGT1|B7FGT1_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 183
Score = 148 bits (374), Expect = 3e-34 Identities = 69/114 (60%), Positives = 84/114 (73%) Frame = +2
Query: 182 SVDVESDSAQTSAEPDPQSVEARRAAEKFAVINTGKWECRSCGYVYEESKGEAAYPIAAG 361 SVD+ ++ TS P S E RR EKF V+NTG +ECRSCGY Y+E G+ +YPI G Sbjct: 53 SVDISNEEDTTSESEKPDS-EKRRLEEKFVVLNTGIYECRSCGYKYDEGVGDPSYPIPPG 111
Query: 362 TEFRNLPEDWRCPICGAGQSYFNSKSVEVAGFAENQNYGLGTNSLTSGQKSLLI 523 +F LP+DWRCP CGA QS+F SKSVE+AGFA+NQ YGLG NSLT GQK++LI Sbjct: 112 YQFEKLPDDWRCPTCGAAQSFFESKSVEIAGFAQNQQYGLGGNSLTGGQKTVLI 165
>tr|A5B456|A5B456_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016717 PE=4 SV=1 Length = 167
Score = 148 bits (374), Expect = 3e-34 Identities = 69/126 (54%), Positives = 90/126 (71%), Gaps = 12/126 (9%) Frame = +2
Query: 182 SVDVESDSAQTSAEPD------------PQSVEARRAAEKFAVINTGKWECRSCGYVYEE 325 SVDV + TS +PD P++ + RR EKFAV+NTG +ECRSCGY Y+E Sbjct: 24 SVDVSKEDKPTSEQPDSSTPTLDSPPQEPENFDKRRLEEKFAVLNTGIYECRSCGYKYDE 83
Query: 326 SKGEAAYPIAAGTEFRNLPEDWRCPICGAGQSYFNSKSVEVAGFAENQNYGLGTNSLTSG 505 + G+ +YPI G +F LP+DWRCP CGA +S+F SKSVE+AGFA+NQ +GLG N+LTSG Sbjct: 84 AAGDPSYPIPPGLQFDKLPDDWRCPTCGAARSFFESKSVEIAGFAQNQQFGLGGNTLTSG 143
Query: 506 QKSLLI 523 QK++LI Sbjct: 144 QKAVLI 149
>tr|A9S9R0|A9S9R0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163749 PE=4 SV=1 Length = 234
Score = 148 bits (373), Expect = 4e-34 Identities = 66/88 (75%), Positives = 79/88 (89%) Frame = +2
Query: 260 EKFAVINTGKWECRSCGYVYEESKGEAAYPIAAGTEFRNLPEDWRCPICGAGQSYFNSKS 439 EKFAV+NTG +ECRSCG+VYEE+KG+A+YP+AAGT FR+LPEDW CP CGA +SY+ KS Sbjct: 129 EKFAVLNTGAYECRSCGHVYEEAKGDASYPVAAGTYFRDLPEDWLCPTCGAAKSYYQPKS 188
Query: 440 VEVAGFAENQNYGLGTNSLTSGQKSLLI 523 VEVAGFA+NQ +GLG N+LTSGQKSLLI Sbjct: 189 VEVAGFAQNQQFGLGGNTLTSGQKSLLI 216
>tr|B8LMH7|B8LMH7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 225
Score = 145 bits (366), Expect = 2e-33 Identities = 72/136 (52%), Positives = 88/136 (64%), Gaps = 18/136 (13%) Frame = +2
Query: 170 PRCMSVDV---------------ESDSAQTSAE---PDPQSVEARRAAEKFAVINTGKWE 295 P CMS+DV ES S +E +P + E FAV+NTGK+E Sbjct: 72 PCCMSIDVGKEGNSSVDMKTENSESSSPDVGSENNTAEPSKIPRLGLEETFAVLNTGKYE 131
Query: 296 CRSCGYVYEESKGEAAYPIAAGTEFRNLPEDWRCPICGAGQSYFNSKSVEVAGFAENQNY 475 C SCGY+Y++S G+ YP+A G EF LPEDWRCP CGA +SYF SKS+EVAGFA+NQ + Sbjct: 132 CTSCGYIYDQSLGDPLYPVAPGLEFSRLPEDWRCPTCGAAKSYFASKSIEVAGFAQNQQF 191
Query: 476 GLGTNSLTSGQKSLLI 523 GLG N+LTSGQKS LI Sbjct: 192 GLGGNTLTSGQKSALI 207
>tr|Q9SLI4|Q9SLI4_ARATH F20D21.31 protein (Rubredoxin, putative) (At1g54500/F20D21_31) (Putative uncharacterized protein F20D21.31) OS=Arabidopsis thaliana GN=At1g54500 PE=2 SV=1 Length = 195
Score = 143 bits (361), Expect = 9e-33 Identities = 68/110 (61%), Positives = 82/110 (74%), Gaps = 1/110 (0%) Frame = +2
Query: 197 SDSAQ-TSAEPDPQSVEARRAAEKFAVINTGKWECRSCGYVYEESKGEAAYPIAAGTEFR 373 SD Q T + ++E RR EKFAV+NTG +ECRSCGY Y+ES G+ +YPI G +F Sbjct: 68 SDQTQETETKEVEDTIEKRRMEEKFAVLNTGIYECRSCGYKYDESAGDPSYPIPPGFQFD 127
Query: 374 NLPEDWRCPICGAGQSYFNSKSVEVAGFAENQNYGLGTNSLTSGQKSLLI 523 LPEDWRCP CGA QS+F SK VE+AGFA+NQ YGLG N+LTSGQK+ LI Sbjct: 128 KLPEDWRCPTCGAAQSFFESKMVEIAGFAQNQQYGLGGNALTSGQKTGLI 177
>tr|Q6Z0E5|Q6Z0E5_ORYSJ Os08g0323400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0078D03.13 PE=2 SV=1 Length = 217
Score = 139 bits (351), Expect = 1e-31 Identities = 64/117 (54%), Positives = 84/117 (71%), Gaps = 7/117 (5%) Frame = +2
Query: 194 ESDSAQTSAEPDPQ-------SVEARRAAEKFAVINTGKWECRSCGYVYEESKGEAAYPI 352 E++ A+ A P+ + V+ RR EKFAV+NTG +ECRSCGY Y+++ G+ +YP+ Sbjct: 83 ETEQAEAVASPELELELEEGPKVDPRRLEEKFAVLNTGVYECRSCGYRYDQAAGDPSYPV 142
Query: 353 AAGTEFRNLPEDWRCPICGAGQSYFNSKSVEVAGFAENQNYGLGTNSLTSGQKSLLI 523 G F LP+DWRCP CGA QS+F SKSVE+AGFA+NQ +GLG NSLT QK+LLI Sbjct: 143 PPGLPFEQLPDDWRCPTCGAAQSFFESKSVEIAGFAQNQQFGLGGNSLTGDQKALLI 199
>tr|A2YU61|A2YU61_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28872 PE=4 SV=1 Length = 217
Score = 139 bits (351), Expect = 1e-31 Identities = 64/117 (54%), Positives = 84/117 (71%), Gaps = 7/117 (5%) Frame = +2
Query: 194 ESDSAQTSAEPDPQ-------SVEARRAAEKFAVINTGKWECRSCGYVYEESKGEAAYPI 352 E++ A+ A P+ + V+ RR EKFAV+NTG +ECRSCGY Y+++ G+ +YP+ Sbjct: 83 ETEQAEAVASPELELELEEGPKVDPRRLEEKFAVLNTGVYECRSCGYRYDQAAGDPSYPV 142
Query: 353 AAGTEFRNLPEDWRCPICGAGQSYFNSKSVEVAGFAENQNYGLGTNSLTSGQKSLLI 523 G F LP+DWRCP CGA QS+F SKSVE+AGFA+NQ +GLG NSLT QK+LLI Sbjct: 143 PPGLPFEQLPDDWRCPTCGAAQSFFESKSVEIAGFAQNQQFGLGGNSLTGDQKALLI 199
>tr|A9RUZ4|A9RUZ4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_161132 PE=4 SV=1 Length = 469
Score = 135 bits (340), Expect = 2e-30 Identities = 59/84 (70%), Positives = 72/84 (85%) Frame = +2
Query: 260 EKFAVINTGKWECRSCGYVYEESKGEAAYPIAAGTEFRNLPEDWRCPICGAGQSYFNSKS 439 E FAV+NTG + CRSCG+VYEE+KG+++YP+AAGT FR+LPEDW CP CGA + YF KS Sbjct: 173 ETFAVLNTGAYACRSCGHVYEEAKGDSSYPVAAGTLFRDLPEDWLCPTCGAAKGYFQPKS 232
Query: 440 VEVAGFAENQNYGLGTNSLTSGQK 511 VEVAGFA+NQ +GLG N+LTSGQK Sbjct: 233 VEVAGFAQNQQFGLGGNTLTSGQK 256
>tr|Q0GBX1|Q0GBX1_MUSAC Putative rubredoxin (Fragment) OS=Musa acuminata PE=2 SV=1 Length = 78
Score = 119 bits (298), Expect = 2e-25 Identities = 50/78 (64%), Positives = 64/78 (82%) Frame = +2
Query: 263 KFAVINTGKWECRSCGYVYEESKGEAAYPIAAGTEFRNLPEDWRCPICGAGQSYFNSKSV 442 +FAV+NTG +ECRSCGY Y+E+ G+ +YPI G +F LP+DWRCP CGA +S+F SKSV Sbjct: 1 RFAVLNTGIYECRSCGYRYDEAAGDPSYPIPPGFQFEKLPDDWRCPTCGAAKSFFESKSV 60
Query: 443 EVAGFAENQNYGLGTNSL 496 E+AGFA+NQ +GLG NSL Sbjct: 61 EIAGFAQNQQFGLGGNSL 78
>tr|A8I686|A8I686_CHLRE Rubredoxin OS=Chlamydomonas reinhardtii GN=RBD1 PE=4 SV=1 Length = 169
Score = 117 bits (293), Expect = 7e-25 Identities = 59/123 (47%), Positives = 75/123 (60%) Frame = +2
Query: 155 VRSRIPRCMSVDVESDSAQTSAEPDPQSVEARRAAEKFAVINTGKWECRSCGYVYEESKG 334 +R+R R S AE E RAAEKF VI +G C+ CGY Y+ KG Sbjct: 29 IRARNVRVFSSTETDPELMGEAERKKLEAEKLRAAEKFMVIGSGSATCKGCGYEYKPEKG 88
Query: 335 EAAYPIAAGTEFRNLPEDWRCPICGAGQSYFNSKSVEVAGFAENQNYGLGTNSLTSGQKS 514 + +P+A GT +++LPED+ CPICGA ++ F S+ VAGFAENQ YGLG NS+T QKS Sbjct: 89 DPEFPVAPGTTYQSLPEDYTCPICGAPKTKFESRVKVVAGFAENQQYGLGGNSMTEAQKS 148
Query: 515 LLI 523 LI Sbjct: 149 GLI 151
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