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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950571
Clone id TST38A01NGRL0009_A07
Library
Length 698
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_A07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
ATTGTACGCAGTATTCAGTATGGCCATCTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCC
TAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTTCTCTGGTCTCAAGGCCACTACCCT
GTTCGCCCCCAAGAGCCCCAACCCGCTCGCCATCTCTAATGGCAGCCGTGTGAGCGCCAT
GCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTACTTGCCGCCTTT
GTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAAGGCTGGACCCCTTG
CATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCAGCGGCAGCGGCTACT
ACGATGTTTTTTTCTGCCCCCCACGTGGAAGCTGCCCATGTTTGGCTGCAAAAAAGGGGG
GGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGCCTTCATCCGCGT
GCTGGGCTTTGACGCTNAGAGGCAGGTGCAGGTCTCCGGCTTCCTTGTCCAGAAGCCCTC
TGTCTAAACTTTCTTAAAGCAAGCCAATTTAGTTGGCATGAATGCCTGCTTCCCATTTCC
CACTGGCGCCTAACAAGCTTGCTCTTATGAGCTTTTGTGTCCCAGCCACTTTGCATACAT
AATGAAACAACTTCCCAGTGGTGGCTTCACTGCTTAAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 157
Score (bit) 146.0
E-value 1.0e-34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950571|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_A07, 5'
         (698 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   146   1e-34
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   145   2e-34
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   145   3e-34
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   145   3e-34
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   144   5e-34
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   144   6e-34
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   142   1e-33
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   142   1e-33
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   142   1e-33
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   142   2e-33
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   142   2e-33
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   142   2e-33
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   141   3e-33
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   141   4e-33
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   140   5e-33
sp|P26985|RBS_BATOE Ribulose bisphosphate carboxylase small chai...   140   5e-33
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   140   7e-33
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   140   7e-33
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   140   7e-33
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   140   9e-33
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   140   9e-33
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   140   9e-33
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   139   1e-32
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha...   139   1e-32
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   139   1e-32
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   139   1e-32
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   139   2e-32
sp|Q08186|RBS6_MESCR Ribulose bisphosphate carboxylase small cha...   139   2e-32
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   139   2e-32
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   138   2e-32

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  146 bits (368), Expect = 1e-34
 Identities = 76/157 (48%), Positives = 98/157 (62%), Gaps = 5/157 (3%)
 Frame = +2

Query: 83  LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 250
           L+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 251 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFQRQRLLRCFFLPPTWKLPMFGCKKGGAV 427
            ++K++D+++R  W PC+EF+ + G VYREH          +    WKLPMFGC     V
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYW-TMWKLPMFGCTDSAQV 140

Query: 428 LREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 538
           ++E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  145 bits (366), Expect = 2e-34
 Identities = 78/153 (50%), Positives = 99/153 (64%), Gaps = 5/153 (3%)
 Frame = +2

Query: 95  FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 262
           F+ LK+T+ F    K+ N +    SNG RV  M VW P   KKFETLSYLPPLSSEQ+AK
Sbjct: 28  FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87

Query: 263 QVDFMVRKGWTPCIEFD-KIGSVYREHFQRQRLLRCFFLPPTWKLPMFGCKKGGAVLREI 439
           +VD+++RK   PC+EF+ + G VYREH +        +    WKLPMFGC     VL+E+
Sbjct: 88  EVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYW-TMWKLPMFGCNDSSQVLKEL 146

Query: 440 AECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 538
            EC K YP AFIR++GFD  RQVQ+  F+  KP
Sbjct: 147 EECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  145 bits (365), Expect = 3e-34
 Identities = 74/149 (49%), Positives = 91/149 (61%)
 Frame = +2

Query: 92  SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 271
           S +    T  FA  S  P   SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 272 FMVRKGWTPCIEFDKIGSVYREHFQRQRLLRCFFLPPTWKLPMFGCKKGGAVLREIAECA 451
           +++R GW PCIEF K+G VYRE+          +    WKLPMFGC     VL+E+ EC+
Sbjct: 88  YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYW-TMWKLPMFGCTDSSQVLKEVDECS 146

Query: 452 KEYPEAFIRVLGFDAXRQVQVSGFLVQKP 538
           K YP+ F R++GFD  RQVQ   FL  KP
Sbjct: 147 KAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  145 bits (365), Expect = 3e-34
 Identities = 74/154 (48%), Positives = 95/154 (61%), Gaps = 6/154 (3%)
 Frame = +2

Query: 95  FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 265
           F GLK+T     A +S   L  +SNG R+  M VW  Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17  FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 266 VDFMVRKGWTPCIEFDKIGSVYREHFQRQRLLRCFF---LPPTWKLPMFGCKKGGAVLRE 436
           VD+++R GW PC+EF K+G VYRE+        C++       WKLPMFGC     V +E
Sbjct: 77  VDYLLRNGWIPCLEFSKVGFVYRENSTSP----CYYDGRYWTMWKLPMFGCNDATQVYKE 132

Query: 437 IAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 538
           + E  K YP+AF RV+GFD  +Q Q   F+  KP
Sbjct: 133 LQEAIKSYPDAFHRVIGFDNIKQTQCVSFIAYKP 166


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  144 bits (363), Expect = 5e-34
 Identities = 75/157 (47%), Positives = 98/157 (62%), Gaps = 8/157 (5%)
 Frame = +2

Query: 92  SFSGLKATTLFAP--KSPNPLA------ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 247
           +F+GLK+T  F    K  N  A       SNG RV  M VW P+ N KFETLSYLP L+ 
Sbjct: 15  AFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTE 74

Query: 248 EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFQRQRLLRCFFLPPTWKLPMFGCKKGGAV 427
           EQ+ K+V++++R  W PC+EFD  GS+ R++ +        +    WKLPMFGC +   V
Sbjct: 75  EQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYW-VMWKLPMFGCTEASQV 133

Query: 428 LREIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 538
           + E+ ECAK YP+AFIRV+GFD  RQVQ   F+V KP
Sbjct: 134 INEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  144 bits (362), Expect = 6e-34
 Identities = 76/153 (49%), Positives = 101/153 (66%), Gaps = 4/153 (2%)
 Frame = +2

Query: 95  FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 265
           F+GLK+++ F    KS +  +I SNG RV  M VW P   KKFETLSYLPPLSSE +AK+
Sbjct: 30  FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 266 VDFMVRKGWTPCIEFD-KIGSVYREHFQRQRLLRCFFLPPTWKLPMFGCKKGGAVLREIA 442
           VD+++RK W PC+EF+ + G VYRE+ +        +    WKLPMFGC     VL+E+ 
Sbjct: 90  VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYW-TMWKLPMFGCTDSSQVLKELE 148

Query: 443 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 541
           E  K YP++FIR++GFD  RQVQ   F+  KP+
Sbjct: 149 EAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPA 181


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  142 bits (359), Expect = 1e-33
 Identities = 74/150 (49%), Positives = 95/150 (63%), Gaps = 1/150 (0%)
 Frame = +2

Query: 98  SGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFM 277
           +GLKA              +NGSRVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++
Sbjct: 32  AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91

Query: 278 VRKGWTPCIEFDKIGSVYREHFQRQRLLRCFFLPPTWKLPMFGCKKGGAVLREIAECAKE 457
           ++ GW PCIEFD  G+V RE           +    WKLPMFGC    +VLREI EC K 
Sbjct: 92  IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYW-TMWKLPMFGCTDSASVLREIEECKKL 150

Query: 458 Y-PEAFIRVLGFDAXRQVQVSGFLVQKPSV 544
           Y  + +IR LGFD  RQVQ + F+V +P++
Sbjct: 151 YGKKCYIRCLGFDNTRQVQCASFIVHQPTL 180


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  142 bits (359), Expect = 1e-33
 Identities = 75/153 (49%), Positives = 95/153 (62%), Gaps = 4/153 (2%)
 Frame = +2

Query: 95  FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 262
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 263 QVDFMVRKGWTPCIEFDKIGSVYREHFQRQRLLRCFFLPPTWKLPMFGCKKGGAVLREIA 442
           +VD+++R  W PCIEF K G VYRE+          +    WKLPMFGC     V+ E+ 
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYW-TMWKLPMFGCTDASQVIAEVE 144

Query: 443 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 541
           E  K YPE F+R++GFD  RQVQ   F+  KP+
Sbjct: 145 EAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  142 bits (359), Expect = 1e-33
 Identities = 75/153 (49%), Positives = 95/153 (62%), Gaps = 4/153 (2%)
 Frame = +2

Query: 95  FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 262
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 263 QVDFMVRKGWTPCIEFDKIGSVYREHFQRQRLLRCFFLPPTWKLPMFGCKKGGAVLREIA 442
           +VD+++R  W PCIEF K G VYRE+          +    WKLPMFGC     V+ E+ 
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYW-TMWKLPMFGCTDASQVIAEVE 144

Query: 443 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 541
           E  K YPE F+R++GFD  RQVQ   F+  KP+
Sbjct: 145 EAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score =  142 bits (358), Expect = 2e-33
 Identities = 74/159 (46%), Positives = 97/159 (61%), Gaps = 5/159 (3%)
 Frame = +2

Query: 92  SFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIA 259
           SF+GLK+   F       L I    SNG RV  MLVW P + KK+ETLSYLP LS EQ+ 
Sbjct: 25  SFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLL 84

Query: 260 KQVDFMVRKGWTPCIEFD-KIGSVYREHFQRQRLLRCFFLPPTWKLPMFGCKKGGAVLRE 436
           K+++++++KGW PC+EF+ + G VYREH +        +    WKLPMFGC     VL E
Sbjct: 85  KEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYW-TMWKLPMFGCTDATQVLNE 143

Query: 437 IAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPSV*TF 553
           + E  K YP+A+IR++GFD  RQVQ   F+  KP    F
Sbjct: 144 VQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEATKF 182
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 155
Score (bit) 244.0
E-value 4.0e-63
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950571|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_A07, 5'
         (698 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   244   4e-63
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   163   1e-38
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   160   6e-38
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   160   7e-38
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   160   7e-38
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   160   1e-37
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   157   5e-37
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   152   2e-35
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   152   3e-35
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   152   3e-35
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   150   8e-35
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   150   8e-35
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   148   4e-34
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   148   4e-34
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   148   4e-34
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   147   8e-34
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c...   147   8e-34
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   146   1e-33
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c...   146   1e-33
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   145   2e-33
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   145   3e-33
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   145   3e-33
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   145   3e-33
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   145   3e-33
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   144   5e-33
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...   144   5e-33
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   144   5e-33
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c...   143   9e-33
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...   143   9e-33
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...   143   9e-33

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  244 bits (623), Expect = 4e-63
 Identities = 122/155 (78%), Positives = 133/155 (85%), Gaps = 2/155 (1%)
 Frame = +2

Query: 83  LSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 262
           LSKSFSGLKA TLFAPK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 263 QVDFMVRKGWTPCIEFDKIGSVYREHFQRQRLL--RCFFLPPTWKLPMFGCKKGGAVLRE 436
           QV++MVRKGWTPCIEFD IGSVYREHF        R + +   WKLPMFGC   G+VLRE
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIM---WKLPMFGCTDSGSVLRE 138

Query: 437 IAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 541
           IAECAKEYP AFIRVLGFDA RQVQV+GFLV+KPS
Sbjct: 139 IAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  163 bits (412), Expect = 1e-38
 Identities = 81/153 (52%), Positives = 102/153 (66%), Gaps = 2/153 (1%)
 Frame = +2

Query: 89  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 268
           K FSGLK+TTLFA K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 269 DFMVRKGWTPCIEFDKIGSVYREHFQRQRLLRCF--FLPPTWKLPMFGCKKGGAVLREIA 442
           DFM+++   PCIEFD +GSV R +F        +       WKLPMFGC     VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 443 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 541
           EC + +P  ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  160 bits (406), Expect = 6e-38
 Identities = 79/153 (51%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
 Frame = +2

Query: 89  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 268
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 269 DFMVRKGWTPCIEFDKIGSVYREHFQRQRLLRCF--FLPPTWKLPMFGCKKGGAVLREIA 442
           D+M+++   PCIEFD +G+V R +F        +       WKLPMFGC     VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 443 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 541
           EC   YP  ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  160 bits (405), Expect = 7e-38
 Identities = 78/153 (50%), Positives = 102/153 (66%), Gaps = 2/153 (1%)
 Frame = +2

Query: 89  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 268
           K+FSGLK+ TLF+ K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 269 DFMVRKGWTPCIEFDKIGSVYREHFQRQRLLRCF--FLPPTWKLPMFGCKKGGAVLREIA 442
           D+M+++   PCIEFD +GSV R +F        +       WKLPMFGC     VLREI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 443 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 541
           EC  ++P  ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  160 bits (405), Expect = 7e-38
 Identities = 79/153 (51%), Positives = 101/153 (66%), Gaps = 2/153 (1%)
 Frame = +2

Query: 89  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 268
           K+FSGLK  TLF+ K+    A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 269 DFMVRKGWTPCIEFDKIGSVYREHFQRQRLLRCF--FLPPTWKLPMFGCKKGGAVLREIA 442
           D+M+++   PCIEFD +GSV R +F        +       WKLPMFGC     VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 443 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 541
           EC  ++P  ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  160 bits (404), Expect = 1e-37
 Identities = 80/153 (52%), Positives = 101/153 (66%), Gaps = 2/153 (1%)
 Frame = +2

Query: 89  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 268
           K FSGLK+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 269 DFMVRKGWTPCIEFDKIGSVYREHFQRQRLLRCF--FLPPTWKLPMFGCKKGGAVLREIA 442
           DFM+++   PCIEFD +GSV R +F        +       WKLPMFGC     VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 443 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 541
           EC + +P  ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  157 bits (398), Expect = 5e-37
 Identities = 76/153 (49%), Positives = 102/153 (66%), Gaps = 2/153 (1%)
 Frame = +2

Query: 89  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 268
           K+FSGLK+ TLF+ ++    ++ NGSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 269 DFMVRKGWTPCIEFDKIGSVYREHFQRQRLLRCF--FLPPTWKLPMFGCKKGGAVLREIA 442
           D+M+++   PCIEFD +GSV R +F        +       WKLPMFGC     VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 443 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 541
           EC  ++P  ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  152 bits (384), Expect = 2e-35
 Identities = 75/151 (49%), Positives = 98/151 (64%)
 Frame = +2

Query: 89  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 268
           K+FSGLK+ T+F+ K+ N  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 269 DFMVRKGWTPCIEFDKIGSVYREHFQRQRLLRCFFLPPTWKLPMFGCKKGGAVLREIAEC 448
           ++M+++   PC+EFD    V R +          +    WKLPMFGC+    VLREI EC
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYW-TMWKLPMFGCQDSAQVLREIEEC 150

Query: 449 AKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 541
            K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 151 KKTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  152 bits (383), Expect = 3e-35
 Identities = 76/151 (50%), Positives = 99/151 (65%)
 Frame = +2

Query: 89  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 268
           K+FSGLK++TLF+ K+ +  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 269 DFMVRKGWTPCIEFDKIGSVYREHFQRQRLLRCFFLPPTWKLPMFGCKKGGAVLREIAEC 448
           D+M+++   PC+EFD    V R +          +    WKLPMFGC+    VLREI EC
Sbjct: 92  DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYW-TMWKLPMFGCQDPAQVLREIEEC 150

Query: 449 AKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 541
            K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 151 KKTFPGCFVRVLGFDNVKQVQICGFLVARPN 181


>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_123666 PE=3 SV=1
          Length = 181

 Score =  152 bits (383), Expect = 3e-35
 Identities = 76/151 (50%), Positives = 99/151 (65%)
 Frame = +2

Query: 89  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 268
           K+FSGLK+ TLF+ +S    ++ NGSRV+ M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 269 DFMVRKGWTPCIEFDKIGSVYREHFQRQRLLRCFFLPPTWKLPMFGCKKGGAVLREIAEC 448
           ++M+++   PC+EFD    V RE+          +    WKLPMFGC+    VLREI EC
Sbjct: 92  EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYW-TMWKLPMFGCQDSAQVLREIEEC 150

Query: 449 AKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 541
            K +P  F+RVLGFD  +QVQ+ GFLV +P+
Sbjct: 151 KKTFPGCFVRVLGFDNVKQVQICGFLVARPN 181