DK950575 [AcEST]

DK950575
Clone id	TST38A01NGRL0009_A12
Library	TST38
Length	196
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_A12. 5' end sequence.
Accession	DK950575
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	-
Sequence	AGAATGTTTCAGGGGCGCCATGAGCGCTGCGCTCGCATGACGTCGTCTTTGTTACCATCG CCACTCATTTCTGATTTCGTCTGAACACATTTTAGATGGGTGCCGACATTTGCTGTGTCC TCCAGGTCACAAAGACAGCGACTGATGATGACATTAGGAAGGCCAACTGTAAACTGGCCG TCGTTTTACAACGTCG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q5R8J8
Definition	sp\|Q5R8J8\|DNJB4_PONAB DnaJ homolog subfamily B member 4 OS=Pongo abelii
Align length	23
Score (bit)	30.0
E-value	3.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK950575\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_A12, 5' (172 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q5R8J8\|DNJB4_PONAB DnaJ homolog subfamily B member 4 OS=Pongo... 30 3.7 sp\|Q9UDY4\|DNJB4_HUMAN DnaJ homolog subfamily B member 4 OS=Homo ... 30 3.7 sp\|Q2KIT4\|DNJB4_BOVIN DnaJ homolog subfamily B member 4 OS=Bos t... 30 3.7 >sp\|Q5R8J8\|DNJB4_PONAB DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1 Length = 337 Score = 30.0 bits (66), Expect = 3.7 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +3 Query: 96 MGADICCVLQVTKTATDDDIRKA 164 MG D C+L + K A+D+DI+KA Sbjct: 1 MGKDYYCILGIEKGASDEDIKKA 23 >sp\|Q9UDY4\|DNJB4_HUMAN DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1 Length = 337 Score = 30.0 bits (66), Expect = 3.7 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +3 Query: 96 MGADICCVLQVTKTATDDDIRKA 164 MG D C+L + K A+D+DI+KA Sbjct: 1 MGKDYYCILGIEKGASDEDIKKA 23 >sp\|Q2KIT4\|DNJB4_BOVIN DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1 Length = 337 Score = 30.0 bits (66), Expect = 3.7 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +3 Query: 96 MGADICCVLQVTKTATDDDIRKA 164 MG D C+L + K A+D+DI+KA Sbjct: 1 MGKDYYCILGIEKGASDEDIKKA 23
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B6WXH2
Definition	tr\|B6WXH2\|B6WXH2_9DELT Putative uncharacterized protein OS=Desulfovibrio piger ATCC 29098
Align length	41
Score (bit)	34.3
E-value	3.1
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK950575\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_A12, 5' (172 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B6WXH2\|B6WXH2_9DELT Putative uncharacterized protein OS=Desul... 34 3.1 >tr\|B6WXH2\|B6WXH2_9DELT Putative uncharacterized protein OS=Desulfovibrio piger ATCC 29098 GN=DESPIG_02798 PE=4 SV=1 Length = 410 Score = 34.3 bits (77), Expect = 3.1 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -2 Query: 126 PGGH-SKCRHPSKMCSDEIRNEWRW*QRRRHASAALMAPLK 7 P GH + PS + +D +R WRW + R A A +MAPL+ Sbjct: 153 PAGHPDQAGRPSLLDADTLRAPWRWLAQGRIAPADIMAPLQ 193