DK950583
Clone id TST38A01NGRL0009_B03
Library
Length 665
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_B03. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CTCTGCTACATTGCAAGTGACTGTGAGGGAGGGTGAGCCTTTGATATGGCAACAATGGCG
GCTGCAGCGCTTTCTTCAAGCACCTTCGCCGGCCAGGCTGTGTATAAGCCCCAGAGCGAG
CTGAGCTCTAAGGTAGGCAATGTGGGCGAGGCCCGCGTGTCCATGAGGAAAACAGTGTCA
AAGAGCTCCGACAGCCCCTGGTATGGCCCCGACCGCGTGAAGTACCTTGGCCCTTTCTCC
GGCGAGGCCCCCAGCTATCTCAAGGGAGAATTTCCCGGCGACTACGGCTGGGACACCGCC
GGCCTGTCTGCCGACCCTGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATTCACGCA
CGGTGGGCTATGTTGGGAGCCCTGGGCTGCGTGACCCCCGAGCTGCTGGCCAAGAATGGT
GTGAAGTTTGGCGAGGCCGTGTGGTTCAAGGCTGGCTCGCAGATCTTTGCTGAGGGTGGG
CTTGACTACTTGGGCAACCCCAGCCTCGTCCACGCTCAGAGCATTCTGGCCATCTGGGCA
TGTCAGGTAATTCTCATGGGCGCTGTTGAGGGATACAGAGTGGCAGGTGGGCCCCTGGGC
GAGGTGGAGGATCCCATCTACCCTGGTGGCTCCTTTGACCCCTTGGGCCTGGCAGACGAC
CCGGA
■■Homology search results ■■ -
sp_hit_id P20866
Definition sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens
Align length 194
Score (bit) 337.0
E-value 3.0e-92
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950583|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_B03, 5'
(665 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 337 3e-92
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 337 3e-92
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 334 3e-91
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 334 3e-91
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 333 4e-91
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 332 1e-90
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 332 1e-90
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 332 1e-90
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 332 1e-90
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 331 2e-90
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 331 2e-90
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 331 2e-90
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 331 2e-90
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 329 7e-90
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas... 329 7e-90
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 329 7e-90
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 329 9e-90
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 328 1e-89
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 328 2e-89
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 328 2e-89
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 328 2e-89
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 328 2e-89
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 327 3e-89
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 327 3e-89
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas... 327 5e-89
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 326 6e-89
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop... 326 6e-89
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 325 1e-88
sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplas... 324 2e-88
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 324 3e-88

>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
OS=Physcomitrella patens PE=3 SV=1
Length = 269

Score = 337 bits (865), Expect = 3e-92
Identities = 166/194 (85%), Positives = 180/194 (92%), Gaps = 3/194 (1%)
Frame = +1

Query: 91 GQAVYKPQSELSSKV-GNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 261
GQ++ KP +ELS KV GNV EARV+MR+TVSKS SD+ WYG DR K+LGPFSGE PSYL
Sbjct: 14 GQSLVKPVNELSRKVLGNV-EARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYL 72

Query: 262 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 441
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAV
Sbjct: 73 NGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAV 132

Query: 442 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 621
WFKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIY
Sbjct: 133 WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIY 192

Query: 622 PGGSFDPLGLADDP 663
PGGSFDPLGLADDP
Sbjct: 193 PGGSFDPLGLADDP 206



Score = 30.8 bits (68), Expect = 6.7
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1

Query: 271 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 420
+PG +D GL+ DP+TFA+ + E+ + R AM G ++ G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
Length = 262

Score = 337 bits (865), Expect = 3e-92
Identities = 158/182 (86%), Positives = 170/182 (93%), Gaps = 4/182 (2%)
Frame = +1

Query: 130 KVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDT 297
KVG+ GE R++MRKTV K +S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDT
Sbjct: 19 KVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 78

Query: 298 AGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEG 477
AGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EG
Sbjct: 79 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEG 138

Query: 478 GLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLAD 657
GLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLAD
Sbjct: 139 GLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAD 198

Query: 658 DP 663
DP
Sbjct: 199 DP 200


>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
SV=1
Length = 265

Score = 334 bits (856), Expect = 3e-91
Identities = 166/187 (88%), Positives = 169/187 (90%), Gaps = 1/187 (0%)
Frame = +1

Query: 106 KPQSELSSKVGNVGEARVSMRKTVSKS-SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGD 282
KP +ELS KVG GEARV M SK+ S S WYG DR YLGPFSG PSYL GEFPGD
Sbjct: 18 KPVNELSRKVG-AGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGD 76

Query: 283 YGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 462
YGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ
Sbjct: 77 YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQ 136

Query: 463 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 642
IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP
Sbjct: 137 IFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDP 196

Query: 643 LGLADDP 663
LGLADDP
Sbjct: 197 LGLADDP 203


>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21,
chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1
Length = 265

Score = 334 bits (856), Expect = 3e-91
Identities = 159/175 (90%), Positives = 166/175 (94%), Gaps = 2/175 (1%)
Frame = +1

Query: 145 GEARVSMRKTVSK--SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 318
G RVSMRKTV+K +S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSADP
Sbjct: 29 GNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADP 88

Query: 319 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 498
ETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 89 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 148

Query: 499 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDP 663
PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DP+YPGGSFDPLGLA+DP
Sbjct: 149 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDP 203


>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic
OS=Spinacia oleracea PE=1 SV=1
Length = 267

Score = 333 bits (855), Expect = 4e-91
Identities = 157/178 (88%), Positives = 165/178 (92%), Gaps = 4/178 (2%)
Frame = +1

Query: 142 VGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLS 309
+GE R++MRKT K S SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLS
Sbjct: 28 IGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLS 87

Query: 310 ADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDY 489
ADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDY
Sbjct: 88 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 147

Query: 490 LGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDP 663
LGNPSLVHAQSILAIWACQVILMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDP
Sbjct: 148 LGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDP 205


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
Length = 267

Score = 332 bits (851), Expect = 1e-90
Identities = 157/177 (88%), Positives = 165/177 (93%), Gaps = 4/177 (2%)
Frame = +1

Query: 145 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 312
G RV+MRKT +K SS SPWYGPDRVKYLGPFSGE+PSYL GEFPGDYGWDTAGLSA
Sbjct: 29 GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSA 88

Query: 313 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 492
DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 493 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDP 663
GNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLADDP
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDP 205


>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type
I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255

Score = 332 bits (851), Expect = 1e-90
Identities = 157/175 (89%), Positives = 165/175 (94%), Gaps = 2/175 (1%)
Frame = +1

Query: 145 GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSADP 318
G A+ +MRKT SKS S SPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADP
Sbjct: 19 GNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 78

Query: 319 ETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGN 498
ETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGEAVWFKAGSQIF+EGGLDYLGN
Sbjct: 79 ETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN 138

Query: 499 PSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDP 663
PSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DPIYPGGSFDPLGLADDP
Sbjct: 139 PSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDP 193


>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B,
chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1
Length = 265

Score = 332 bits (850), Expect = 1e-90
Identities = 161/194 (82%), Positives = 173/194 (89%), Gaps = 3/194 (1%)
Frame = +1

Query: 91 GQAVYKPQSELSSKVGNV-GEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYL 261
GQAV +LS + G R++MRK V+KS S SPWYGPDRVKYLGPFSGE+PSYL
Sbjct: 15 GQAV-----KLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYL 69

Query: 262 KGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAV 441
GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAV
Sbjct: 70 TGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAV 129

Query: 442 WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIY 621
WFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV DP+Y
Sbjct: 130 WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLY 189

Query: 622 PGGSFDPLGLADDP 663
PGGSFDPLGLA+DP
Sbjct: 190 PGGSFDPLGLAEDP 203


>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25,
chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1
Length = 266

Score = 332 bits (850), Expect = 1e-90
Identities = 162/195 (83%), Positives = 171/195 (87%), Gaps = 4/195 (2%)
Frame = +1

Query: 91 GQAVYKPQSELSSKVGNVGEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSY 258
G+AV P S + G + +MRKTV+K SS SPWYGPDRVKYLGPFSGEAPSY
Sbjct: 15 GKAVNVPSSSQIT-----GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSY 69

Query: 259 LKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEA 438
L GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL A+NGVKFGEA
Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEA 129

Query: 439 VWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPI 618
VWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DP+
Sbjct: 130 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPL 189

Query: 619 YPGGSFDPLGLADDP 663
YPGGSFDPLGLADDP
Sbjct: 190 YPGGSFDPLGLADDP 204


>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7,
chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1
Length = 267

Score = 331 bits (849), Expect = 2e-90
Identities = 157/177 (88%), Positives = 164/177 (92%), Gaps = 4/177 (2%)
Frame = +1

Query: 145 GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPSYLKGEFPGDYGWDTAGLSA 312
G + MRKTV+K SS SPWYGPDRVKYLGPFSGEAPSYL GEFPGDYGWDTAGLSA
Sbjct: 29 GNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSA 88

Query: 313 DPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYL 492
DPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYL
Sbjct: 89 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 148

Query: 493 GNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDP 663
GNPSLVHAQSILAIWACQV+LMGA+EGYRVAGGPLGEV DP+YPGGSFDPLGLADDP
Sbjct: 149 GNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDP 205


tr_hit_id A9RNP2
Definition tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 191
Score (bit) 348.0
E-value 1.0e-94
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950583|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_B03, 5'
(665 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 348 1e-94
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco... 344 2e-93
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten... 344 2e-93
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ... 344 3e-93
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 343 4e-93
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten... 343 5e-93
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ... 340 4e-92
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten... 340 4e-92
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten... 340 6e-92
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 338 2e-91
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 337 3e-91
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 337 4e-91
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 337 4e-91
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ... 336 7e-91
tr|O64445|O64445_NICSY Light harvesting chlorophyll a/b-binding ... 336 9e-91
tr|B6STN4|B6STN4_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 336 9e-91
tr|Q40961|Q40961_PRUPE Light-harvesting chlorophyll a/b-binding ... 335 2e-90
tr|O04687|O04687_MESCR Chlorophyll a/b-binding protein OS=Mesemb... 335 2e-90
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor... 334 3e-90
tr|O64443|O64443_NICSY Light harvesting chlorophyll a/b-binding ... 334 3e-90
tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome... 334 3e-90
tr|A4F3R3|A4F3R3_SPIOL Major chlorophyll a/b binding protein LHC... 334 3e-90
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ... 334 3e-90
tr|B3WFZ6|B3WFZ6_SPIOL Major chlorophyll a/b binding protein LHC... 333 4e-90
tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu... 333 6e-90
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC... 333 6e-90
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu... 333 7e-90
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O... 333 7e-90
tr|O04686|O04686_MESCR Chlorophyll a/b-binding protein OS=Mesemb... 333 7e-90
tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin... 332 1e-89

>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
Length = 265

Score = 348 bits (894), Expect = 1e-94
Identities = 169/191 (88%), Positives = 178/191 (93%)
Frame = +1

Query: 91 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 270
GQ++ KP +ELS KVGNV EAR+SMRKT SKSSDS WYG DR KYLGPFSGE PSYL GE
Sbjct: 14 GQSLLKPVNELSRKVGNV-EARISMRKTASKSSDSIWYGADRPKYLGPFSGETPSYLNGE 72

Query: 271 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 450
F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 73 FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 132

Query: 451 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 630
AG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYPGG
Sbjct: 133 AGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGG 192

Query: 631 SFDPLGLADDP 663
SFDPLGLADDP
Sbjct: 193 SFDPLGLADDP 203


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
OS=Physcomitrella patens PE=2 SV=1
Length = 268

Score = 344 bits (883), Expect = 2e-93
Identities = 169/193 (87%), Positives = 179/193 (92%), Gaps = 2/193 (1%)
Frame = +1

Query: 91 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 264
GQA+ KP SELS KV N GEARV+MRKTVSKSS DS WYG DR K+LGPFSGE PSYL
Sbjct: 15 GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 265 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 444
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 445 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 624
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193

Query: 625 GGSFDPLGLADDP 663
GGSFDPLGLADDP
Sbjct: 194 GGSFDPLGLADDP 206


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
Length = 268

Score = 344 bits (883), Expect = 2e-93
Identities = 169/193 (87%), Positives = 179/193 (92%), Gaps = 2/193 (1%)
Frame = +1

Query: 91 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSS--DSPWYGPDRVKYLGPFSGEAPSYLK 264
GQA+ KP SELS KV N GEARV+MRKTVSKSS DS WYG DR K+LGPFSGE PSYL
Sbjct: 15 GQALLKPVSELSRKV-NAGEARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGETPSYLN 73

Query: 265 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 444
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 74 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 133

Query: 445 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 624
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 134 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYP 193

Query: 625 GGSFDPLGLADDP 663
GGSFDPLGLADDP
Sbjct: 194 GGSFDPLGLADDP 206


>tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding
protein of photosystem II OS=Ginkgo biloba PE=2 SV=1
Length = 270

Score = 344 bits (882), Expect = 3e-93
Identities = 167/196 (85%), Positives = 178/196 (90%), Gaps = 5/196 (2%)
Frame = +1

Query: 91 GQAVYKPQSELSSKVGNV-GEARVSMRKTVSK----SSDSPWYGPDRVKYLGPFSGEAPS 255
GQ V KPQ+E VG V GE R++MRKT SK SS SPWYGPDRVKYLGPFSGEAPS
Sbjct: 16 GQIVLKPQNEF---VGGVHGEGRITMRKTASKKVVASSGSPWYGPDRVKYLGPFSGEAPS 72

Query: 256 YLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 435
YL GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL++NGVKFGE
Sbjct: 73 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 132

Query: 436 AVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDP 615
AVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQVILMGAVEGYR+AGGPLGE+ DP
Sbjct: 133 AVWFKAGSQIFSDGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEITDP 192

Query: 616 IYPGGSFDPLGLADDP 663
IYPGGSFDPLGLADDP
Sbjct: 193 IYPGGSFDPLGLADDP 208


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
Length = 267

Score = 343 bits (881), Expect = 4e-93
Identities = 168/193 (87%), Positives = 179/193 (92%), Gaps = 2/193 (1%)
Frame = +1

Query: 91 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 264
GQ V KP +ELS KVGNV EARV+MR+TVSKS SDS WYG DR K+LGPFSGE PSYL
Sbjct: 14 GQGVLKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLT 72

Query: 265 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 444
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 445 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 624
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 625 GGSFDPLGLADDP 663
GGSFDPLGLADDP
Sbjct: 193 GGSFDPLGLADDP 205


>tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_124625 PE=4 SV=1
Length = 267

Score = 343 bits (880), Expect = 5e-93
Identities = 167/193 (86%), Positives = 180/193 (93%), Gaps = 2/193 (1%)
Frame = +1

Query: 91 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 264
GQ++ KP +ELS KVGNV EARV+MR+TVSKS SDS WYG DR K+LGPFSGE PSYL
Sbjct: 14 GQSLVKPVNELSRKVGNV-EARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 265 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 444
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 445 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 624
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 625 GGSFDPLGLADDP 663
GGSFDPLGLADDP
Sbjct: 193 GGSFDPLGLADDP 205


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
protein 2 (Predicted protein) OS=Physcomitrella patens
subsp. patens GN=PpLhcb2 PE=4 SV=1
Length = 267

Score = 340 bits (873), Expect = 4e-92
Identities = 166/193 (86%), Positives = 179/193 (92%), Gaps = 2/193 (1%)
Frame = +1

Query: 91 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 264
GQ++ KP +ELS KVG+ +ARV+MR+TV+KS SDS WYG DR KYLGPFSGE PSYL
Sbjct: 14 GQSLLKPVNELSRKVGS-SQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 265 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 444
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 445 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 624
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 625 GGSFDPLGLADDP 663
GGSFDPLGLADDP
Sbjct: 193 GGSFDPLGLADDP 205


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
Length = 267

Score = 340 bits (873), Expect = 4e-92
Identities = 168/193 (87%), Positives = 178/193 (92%), Gaps = 2/193 (1%)
Frame = +1

Query: 91 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 264
GQ++ KP +ELS KVGNV EARVSMRK+ SKS SDS WYG DR KYLGPFSGE PSYL
Sbjct: 14 GQSLLKPVNELSRKVGNV-EARVSMRKSASKSAASDSIWYGADRPKYLGPFSGETPSYLN 72

Query: 265 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 444
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKFGEAVW 132

Query: 445 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 624
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYP 192

Query: 625 GGSFDPLGLADDP 663
GGSFDPLGLADDP
Sbjct: 193 GGSFDPLGLADDP 205


>tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_110819 PE=4 SV=1
Length = 267

Score = 340 bits (871), Expect = 6e-92
Identities = 163/193 (84%), Positives = 181/193 (93%), Gaps = 2/193 (1%)
Frame = +1

Query: 91 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKS--SDSPWYGPDRVKYLGPFSGEAPSYLK 264
GQ++++P +ELS KVGNV ++RV+MR+TV+KS SDS WYG DR K+LGPFSGE PSYL
Sbjct: 14 GQSLFQPVNELSRKVGNV-DSRVTMRRTVNKSAGSDSIWYGADRPKFLGPFSGETPSYLN 72

Query: 265 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 444
GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GVKFGEAVW
Sbjct: 73 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVW 132

Query: 445 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYP 624
FKAG+QIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV DPIYP
Sbjct: 133 FKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYP 192

Query: 625 GGSFDPLGLADDP 663
GGSFDPLGLADDP
Sbjct: 193 GGSFDPLGLADDP 205


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
Length = 263

Score = 338 bits (867), Expect = 2e-91
Identities = 166/191 (86%), Positives = 174/191 (91%)
Frame = +1

Query: 91 GQAVYKPQSELSSKVGNVGEARVSMRKTVSKSSDSPWYGPDRVKYLGPFSGEAPSYLKGE 270
GQ++ KP +ELS KVG EARVSMRK S SDS WYG DR K+LGPFSGE PSYL GE
Sbjct: 14 GQSLLKPVNELSRKVGT-SEARVSMRK--SSGSDSIWYGADRPKFLGPFSGETPSYLNGE 70

Query: 271 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 450
F GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK
Sbjct: 71 FAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 130

Query: 451 AGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGG 630
AG+QIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV DPIYPGG
Sbjct: 131 AGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGG 190

Query: 631 SFDPLGLADDP 663
SFDPLGLADDP
Sbjct: 191 SFDPLGLADDP 201