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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950586
Clone id TST38A01NGRL0009_B06
Library
Length 674
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_B06. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence 
GTGCAGGAAACATTGCATGGAGATCAAATCAGCAGTTTTAAGGATGATGAAATCACAAGA
TATACTGGAAAAGAGGACACCGAAGGCTACGCTCGAGACACACAAGAACTGCGTTTTGAA
GAGAATGGTAGCTCTGGGGAGAAGCTCTGTCAACCCGAGGGGGATAGTAGCTCATTTGGA
GAAGCTATGAACCTCTCAAATTTGAATCTGGTCAGTCATAGTGAAAACCAAGACCCAATT
GAGGGGAATGATGTAGTAGCGAGCGGACCGCAAGACTTCAATCCGGGAAAGACAGAGAGT
GAAAAGCTTGTGGAATCAACAGCAAACACTTCAGATGCATCAGTTGAAACCCCAGCGTCC
TCAAGGTCAGAAAGCTCAAGTCAGAGCACGCCAAGAAGTCTTGTTACAACAAGTGTTTCA
GAGCCGGCAGAGTCCTTGAATTCAAAGGCCTCAACAATCACTGATGTTTCAGATGATGAA
TCAAGTGACAACAGTGATAAAAGTGAACAAGAGGGTGAGTCTACTGCCCAGCATGATAGA
GGGATCATCACACCTTTAGGCCCACAAAGAATGACAAGGACAGCAACCAATATATCAGAT
TGGCATAATTTACCACCTGCTATAGAGGATTCTTCACGTAGACGATTGTCACAGCAAGCT
CCCAGGGCATCTGC
■■Homology search results ■■ -
sp_hit_id P53940
Definition sp|P53940|YNH7_YEAST Uncharacterized J domain-containing protein YNL077W OS=Saccharomyces cerevisiae
Align length 38
Score (bit) 32.0
E-value 3.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950586|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_B06, 5'
         (674 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P53940|YNH7_YEAST Uncharacterized J domain-containing protein...    32   3.1  
sp|Q9UKE5|TNIK_HUMAN TRAF2 and NCK-interacting protein kinase OS...    32   3.1  
sp|Q9QZQ0|NPAS3_MOUSE Neuronal PAS domain-containing protein 3 O...    32   4.0  
sp|Q45978|HFAC_CAUCR Holdfast attachment protein C OS=Caulobacte...    32   4.0  
sp|A7TIN6|MSS11_VANPO Transcription activator MSS11 OS=Vanderwal...    31   6.8  
sp|Q86AF2|Y6864_DICDI Putative uncharacterized protein DDB_G0271...    30   8.9  
sp|Q8IXF0|NPAS3_HUMAN Neuronal PAS domain-containing protein 3 O...    30   8.9  

>sp|P53940|YNH7_YEAST Uncharacterized J domain-containing protein
           YNL077W OS=Saccharomyces cerevisiae GN=YNL077W PE=1 SV=1
          Length = 528

 Score = 32.0 bits (71), Expect = 3.1
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = -2

Query: 670 MPWELAVTIVYVKNPL*QVVNYANLIYWLLSLSFFVGL 557
           +P ++ +TI+ +K+P  QV+NY+NLI     + F   L
Sbjct: 312 IPGDVVITILRLKDPNFQVINYSNLICKKCKIDFMTSL 349


>sp|Q9UKE5|TNIK_HUMAN TRAF2 and NCK-interacting protein kinase OS=Homo
            sapiens GN=TNIK PE=1 SV=1
          Length = 1360

 Score = 32.0 bits (71), Expect = 3.1
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = +1

Query: 130  SSGEKLCQPEGDSSSFGEAMNLSNLNLVSHSENQDPIEGNDVVASGPQDFNPG 288
            +SGEK      DS+ F   +NL +L   SHS    P EG   V++  Q+ + G
Sbjct: 908  TSGEKKRSGHSDSNGFAGHINLPDLVQQSHSPAGTPTEGLGRVSTHSQEMDSG 960


>sp|Q9QZQ0|NPAS3_MOUSE Neuronal PAS domain-containing protein 3
           OS=Mus musculus GN=Npas3 PE=2 SV=1
          Length = 925

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 27/98 (27%), Positives = 39/98 (39%), Gaps = 13/98 (13%)
 Frame = +1

Query: 73  EDTEGYARDTQELRFEENGSSGEKLCQPEGDSSSFGEAM-NLSNLNLVSHS-------EN 228
           +DT G   D +  + +E G+  E    PE D    G A  N  N N   HS       ++
Sbjct: 474 KDTSGITEDNENSKSDEKGNQSENSEDPEPDRKKSGSACDNDMNCNDDGHSSSNPDSRDS 533

Query: 229 QDPIEGND-----VVASGPQDFNPGKTESEKLVESTAN 327
            D  E +D         G     P + + E+ VES A+
Sbjct: 534 DDSFEHSDFEHPKAAEDGFGALGPMQIKVERYVESEAD 571


>sp|Q45978|HFAC_CAUCR Holdfast attachment protein C OS=Caulobacter
           crescentus GN=hfaC PE=3 SV=2
          Length = 608

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 22/81 (27%), Positives = 37/81 (45%)
 Frame = +1

Query: 70  KEDTEGYARDTQELRFEENGSSGEKLCQPEGDSSSFGEAMNLSNLNLVSHSENQDPIEGN 249
           K+D +   R T  +  E  G+SG+++ + +G +  FGE   + N        +   + G+
Sbjct: 259 KKDRQSELRGTMTMAVESAGTSGKRVVEAKGVTKRFGERTIVENF-------STRILRGD 311

Query: 250 DVVASGPQDFNPGKTESEKLV 312
            V   GP     GKT   KL+
Sbjct: 312 RVALVGPN--GAGKTTLVKLL 330


>sp|A7TIN6|MSS11_VANPO Transcription activator MSS11
           OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
           70294) GN=MSS11 PE=3 SV=1
          Length = 810

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +2

Query: 284 RERQRVKSLWNQQQTLQMHQLKPQRPQGQKAQVRARQE 397
           RER R+     QQQ ++  Q++ QRPQ  + Q++ +Q+
Sbjct: 356 RERMRIM---RQQQQIRQQQMQQQRPQPNQQQIQQQQQ 390


>sp|Q86AF2|Y6864_DICDI Putative uncharacterized protein DDB_G0271606
           OS=Dictyostelium discoideum GN=DDB_G0271606 PE=4 SV=1
          Length = 1212

 Score = 30.4 bits (67), Expect = 8.9
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +2

Query: 284 RERQRVKSLWNQQQTLQMHQLKPQRPQGQKAQVRARQEVLLQQ 412
           +++Q+ +    QQQ  Q  Q   Q+PQ Q++Q +A+Q+   QQ
Sbjct: 614 QQQQQQQQQQQQQQQQQQQQQAQQQPQAQQSQQQAQQQQQNQQ 656


>sp|Q8IXF0|NPAS3_HUMAN Neuronal PAS domain-containing protein 3
           OS=Homo sapiens GN=NPAS3 PE=2 SV=1
          Length = 933

 Score = 30.4 bits (67), Expect = 8.9
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +1

Query: 73  EDTEGYARDTQELRFEENGSSGEKLCQPEGDSSSFGEAM-NLSNLNLVSH-SENQDPIEG 246
           +DT G   D +  + +E G+  E    PE D    G A  N  N N   H S N D  + 
Sbjct: 469 KDTSGITEDNENSKSDEKGNQSENSEDPEPDRKKSGNACDNDMNCNDDGHSSSNPDSRDS 528

Query: 247 ND 252
           +D
Sbjct: 529 DD 530
tr_hit_id B4M3P5
Definition tr|B4M3P5|B4M3P5_DROVI GJ19251 OS=Drosophila virilis
Align length 71
Score (bit) 28.5
E-value 0.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950586|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_B06, 5'
         (674 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4M3P5|B4M3P5_DROVI GJ19251 OS=Drosophila virilis GN=GJ19251 ...    28   0.80 
tr|A6R3Y5|A6R3Y5_AJECN Negative regulator of the PHO system OS=A...    37   0.87 
tr|Q4CUT4|Q4CUT4_TRYCR Mucin TcMUCII, putative OS=Trypanosoma cr...    36   2.5  
tr|Q5FFL1|Q5FFL1_EHRRG Putative uncharacterized protein OS=Ehrli...    35   3.3  
tr|B4FSM2|B4FSM2_MAIZE Putative uncharacterized protein OS=Zea m...    35   5.6  
tr|Q22WK5|Q22WK5_TETTH Putative uncharacterized protein OS=Tetra...    35   5.6  
tr|B6MYX8|B6MYX8_BRAFL Putative uncharacterized protein OS=Branc...    34   7.4  
tr|Q01MQ8|Q01MQ8_ORYSA OSIGBa0113D21.2 protein OS=Oryza sativa G...    34   9.6  
tr|A9S3A3|A9S3A3_PHYPA Predicted protein OS=Physcomitrella paten...    34   9.6  
tr|B6PJ80|B6PJ80_BRAFL Putative uncharacterized protein OS=Branc...    34   9.6  

>tr|B4M3P5|B4M3P5_DROVI GJ19251 OS=Drosophila virilis GN=GJ19251
           PE=4 SV=1
          Length = 592

 Score = 28.5 bits (62), Expect(2) = 0.80
 Identities = 19/71 (26%), Positives = 30/71 (42%)
 Frame = +1

Query: 121 ENGSSGEKLCQPEGDSSSFGEAMNLSNLNLVSHSENQDPIEGNDVVASGPQDFNPGKTES 300
           ++ SS  K       SSS     + S+ N  S S N+     ND  +    + N GK+ S
Sbjct: 217 KSSSSSNKSSSSSNKSSSSSNKSSSSSNNKSSSSSNKSGSSNNDSSSKSNSNSNGGKSSS 276

Query: 301 EKLVESTANTS 333
                S +++S
Sbjct: 277 SSSNSSKSSSS 287



 Score = 28.1 bits (61), Expect(2) = 0.80
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
 Frame = +2

Query: 311 WNQQQTLQMHQLKPQ------RPQGQKAQVRARQEVLLQQ 412
           W+QQQ  Q+HQL+ Q      R Q Q  Q + +Q  L QQ
Sbjct: 315 WDQQQQQQLHQLQQQQQNHLMRQQYQLQQQQQQQYELQQQ 354


>tr|A6R3Y5|A6R3Y5_AJECN Negative regulator of the PHO system
           OS=Ajellomyces capsulata (strain NAm1 / WU24)
           GN=HCAG_04343 PE=4 SV=1
          Length = 788

 Score = 37.4 bits (85), Expect = 0.87
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
 Frame = +1

Query: 43  DDEITRYTGKEDTEGYARDTQELRFEENGSSGEKL-CQPEGDSSSFGEAMNLSNLNLVSH 219
           DD+    TG   ++  A D      E +GS+G  L C    +   +G+  N  +L++ S 
Sbjct: 506 DDKHAYKTGDFSSQTSAMDANHFAIEGSGSNGFSLWCYTSENCHEWGDRWNGEDLSIFSA 565

Query: 220 SENQDPIEGNDVVASGPQDFNPGKTESEKLVESTANTSDA 339
            + + P++  DV+ + PQ+     ++      STA +S A
Sbjct: 566 DDLELPLQDLDVLGNIPQNRLSTSSDRTSPTFSTAQSSSA 605


>tr|Q4CUT4|Q4CUT4_TRYCR Mucin TcMUCII, putative OS=Trypanosoma cruzi
           GN=Tc00.1047053511373.20 PE=4 SV=1
          Length = 237

 Score = 35.8 bits (81), Expect = 2.5
 Identities = 29/106 (27%), Positives = 54/106 (50%)
 Frame = +1

Query: 16  HGDQISSFKDDEITRYTGKEDTEGYARDTQELRFEENGSSGEKLCQPEGDSSSFGEAMNL 195
           HG+   S   D + +   + ++E  +R+ +    +E   S  K+  P  ++S  G+A ++
Sbjct: 45  HGEPQESITVDGVLQAGSRRNSEDGSRNNKSTPPKEEKKS-VKVLTPNTEASVAGQAGSV 103

Query: 196 SNLNLVSHSENQDPIEGNDVVASGPQDFNPGKTESEKLVESTANTS 333
            ++N     EN DP++G+D V +G QD     TE +    +T NT+
Sbjct: 104 -DINGHVAKENVDPLQGSDTVNAG-QDVKRADTEIK--TNTTTNTT 145


>tr|Q5FFL1|Q5FFL1_EHRRG Putative uncharacterized protein OS=Ehrlichia
            ruminantium (strain Gardel) GN=ERGA_CDS_05370 PE=4 SV=1
          Length = 1591

 Score = 35.4 bits (80), Expect = 3.3
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
 Frame = +1

Query: 64   TGKEDTEGYARDTQELRFEENGSSGEKLCQPEGDSSSFGEAMNLSNLNLVSHSENQDPIE 243
            +G +DT G   DT++    ++ +  E + Q E D    G   + SN       +NQD I+
Sbjct: 1408 SGSDDTTGVGSDTEDKTSGDDDNKDESVQQNESDVEEEGNTTDRSN-----PMDNQDSID 1462

Query: 244  --GNDVVASGPQDFNPGKTESEKLVESTANTSDA 339
               +  ++ G  D       SE  VES A+ SD+
Sbjct: 1463 DTSDSSISEGESDV------SESDVESNASESDS 1490


>tr|B4FSM2|B4FSM2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 343

 Score = 34.7 bits (78), Expect = 5.6
 Identities = 27/105 (25%), Positives = 50/105 (47%)
 Frame = +1

Query: 19  GDQISSFKDDEITRYTGKEDTEGYARDTQELRFEENGSSGEKLCQPEGDSSSFGEAMNLS 198
           G++    KD+EIT  +G E T+G ++D QE +  +  ++ E+  + E +    GE    S
Sbjct: 154 GEKSVEKKDNEITNESGDEKTDGESKDGQEEK-PDGDAAQEEQPKIEENVEENGEKDQSS 212

Query: 199 NLNLVSHSENQDPIEGNDVVASGPQDFNPGKTESEKLVESTANTS 333
           N N V     Q  +       +G       ++++EK V++   +S
Sbjct: 213 NSNEVFPDGAQSELLKESNTQNGSFPTQAAESKNEKEVQALPKSS 257


>tr|Q22WK5|Q22WK5_TETTH Putative uncharacterized protein
           OS=Tetrahymena thermophila SB210 GN=TTHERM_00155290 PE=4
           SV=1
          Length = 1420

 Score = 34.7 bits (78), Expect = 5.6
 Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 11/96 (11%)
 Frame = +1

Query: 22  DQISSFKDDEITRYTGKEDTEGYARDTQELRFEENGSSGEKLCQPEGDSSSFG------- 180
           D+I +F+  + ++   KE  E    D +E++ +EN    E   Q E D            
Sbjct: 322 DEIINFQHFDRSKSLQKEQQEDQGNDEEEVKLDENDEDNENQEQKEEDIDDDDLLLDEED 381

Query: 181 ----EAMNLSNLNLVSHSENQDPIEGNDVVASGPQD 276
               EA NL         EN    EG D+  S  ++
Sbjct: 382 NIDVEAQNLQKQEAQRQEENNPEYEGQDIQPSDDEE 417


>tr|B6MYX8|B6MYX8_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_88511 PE=4 SV=1
          Length = 779

 Score = 34.3 bits (77), Expect = 7.4
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
 Frame = +1

Query: 4   QETLHGDQISS-FKDDEITRYTGKEDTEGYARDTQELRFEENGSSGEKLCQPEGDSSSFG 180
           ++++    IS  F D+E TR+  +E TE   R +++L ++ NG  GE+         +  
Sbjct: 438 EDSIQAPPISQIFPDEESTRFAEEEATEDDPRHSRQLVYDNNGQHGERKRTTSVTKPTVA 497

Query: 181 EAMNLSNLNLVSHSENQDPIEGNDVVASGPQDFNPGKTES 300
              N+S     S S  +D  E      S   DF P K  S
Sbjct: 498 VG-NVSQGPTASRSSPEDTTE-----YSAKADFLPPKANS 531


>tr|Q01MQ8|Q01MQ8_ORYSA OSIGBa0113D21.2 protein OS=Oryza sativa
           GN=OSIGBa0113D21.2 PE=4 SV=1
          Length = 1345

 Score = 33.9 bits (76), Expect = 9.6
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +1

Query: 40  KDDEIT--RYTGKEDTEGYARDTQELRFEENGSSGEKLCQPEGDSSSFGEAMNLSNLNLV 213
           KD E T  +Y  K   +G   ++    F++  ++ E L   +G+S    +  N+S++  +
Sbjct: 248 KDGEKTNNKYKSKGSNQGKKMESLRKAFQQVCAAFEPLSDVDGESGDDDKGKNVSDVCFM 307

Query: 214 SHSENQDPIEGNDVVA 261
           +H E+    E N+V A
Sbjct: 308 AHGESDTEYEDNEVSA 323


>tr|A9S3A3|A9S3A3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_162589 PE=4 SV=1
          Length = 1379

 Score = 33.9 bits (76), Expect = 9.6
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = +2

Query: 278 SIRERQRVKSLWNQQQTLQMHQLKPQRPQGQKAQVRARQEVLLQQV 415
           S+R  Q++K+   QQQ LQ  Q + Q+ Q  +AQ +A+ +   QQV
Sbjct: 222 SVRTTQQLKAREQQQQQLQQQQQQQQQQQQAQAQAQAQAQQQQQQV 267


>tr|B6PJ80|B6PJ80_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_107605 PE=4 SV=1
          Length = 779

 Score = 33.9 bits (76), Expect = 9.6
 Identities = 26/88 (29%), Positives = 38/88 (43%)
 Frame = +1

Query: 37  FKDDEITRYTGKEDTEGYARDTQELRFEENGSSGEKLCQPEGDSSSFGEAMNLSNLNLVS 216
           F D+E TR+  +E TE   R +++L ++ NG  GE+         +     N+S     S
Sbjct: 450 FPDEESTRFAEEEATEDDPRHSRQLVYDNNGQHGERKRTTSVTKPTVAVG-NVSQGPTAS 508

Query: 217 HSENQDPIEGNDVVASGPQDFNPGKTES 300
            S  +D  E      S   DF P K  S
Sbjct: 509 RSSPEDTTE-----YSAKADFLPPKANS 531