DK950611
Clone id TST38A01NGRL0009_C08
Library
Length 647
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_C08. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
CTTCAGTACTCTCTGAGTGAGTCTCCTCTGTTTACCTGCTGCCCCTGCCCGCTGAGGTTT
TTCCGCATTCTTGTCGACGCACAAGCTTGGAGTTCACGCACGCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCACACACACACACACACACACACACTGCAAAGGTATCCTTTGCA
GCAGCTCACTTTTGTCCCTCTGGTTCTGCATGAAGGAAGGGCACTGCAGCCAAAAGTTTG
TGCCGGCCAAGAAGCATGCCGAACCTGCACAGCCCATTTGAATCAGAATTACAGATCTGT
ATGTTGCGGTGAGGATGATGCAGGACTTGTTACAAGCAAATCTGTCTTTCGGGAGAGGTC
TGATTGTCAGACAGACTACTTGAAACTCTGTTAAGAAACGGAAACAACGCCTAAGGATTT
ATCTGCAAGAACTATGGGAAAAGCCCAAAGAACATATGCTCCGTCATGCTTTATGGAGCT
CCGTGGATGCCCTGCATCATACAGTGCTAAGCAAGGTATCGTTTTGTAATTAACAGAGCA
TTTGGTACAGGTTTTCAATAAACACTCACGATGTCGCGACGACCTTCAGGAGAAGGTTAA
TTGCCCCTTTACGCAGTTATCTGTGGAAGATTGTAAGCTGCTTGTGT
■■Homology search results ■■ -
sp_hit_id Q99MK9
Definition sp|Q99MK9|RASF1_MOUSE Ras association domain-containing protein 1 OS=Mus musculus
Align length 25
Score (bit) 30.8
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950611|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_C08, 5'
(647 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q99MK9|RASF1_MOUSE Ras association domain-containing protein ... 31 6.4
sp|Q91XQ0|DYH8_MOUSE Dynein heavy chain 8, axonemal OS=Mus muscu... 30 8.3

>sp|Q99MK9|RASF1_MOUSE Ras association domain-containing protein 1
OS=Mus musculus GN=Rassf1 PE=2 SV=1
Length = 340

Score = 30.8 bits (68), Expect = 6.4
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2

Query: 536 EHLVQVFNKHSRCRDDLQEKVN-CP 607
EHL Q+ K+SRCR +QE ++ CP
Sbjct: 314 EHLRQILQKYSRCRQKIQEALHACP 338


>sp|Q91XQ0|DYH8_MOUSE Dynein heavy chain 8, axonemal OS=Mus musculus
GN=Dnahc8 PE=2 SV=1
Length = 4731

Score = 30.4 bits (67), Expect = 8.3
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = -1

Query: 407 LFPFLNRVSSSLSDNQTSPERQICL*QVLHHPHRNIQICNSDSNGLCRFGML 252
LFP L SS+ ++ Q++ + Q+ L +++HP N+++ L R G++
Sbjct: 2315 LFPGLQLDSSTYAELQSAVDNQVNLEGLINHPPWNLKLVQLYETSLVRHGLM 2366


tr_hit_id Q6B0K7
Definition tr|Q6B0K7|Q6B0K7_CHICK Endoglin OS=Gallus gallus
Align length 139
Score (bit) 36.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950611|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_C08, 5'
(647 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6B0K7|Q6B0K7_CHICK Endoglin OS=Gallus gallus PE=2 SV=1 37 1.3
tr|A8P9G5|A8P9G5_BRUMA EF hand family protein OS=Brugia malayi G... 34 6.7

>tr|Q6B0K7|Q6B0K7_CHICK Endoglin OS=Gallus gallus PE=2 SV=1
Length = 644

Score = 36.6 bits (83), Expect = 1.3
Identities = 35/139 (25%), Positives = 61/139 (43%)
Frame = +2

Query: 200 LVLHEGRALQPKVCAGQEACRTCTAHLNQNYRSVCCGEDDAGLVTSKSVFRERSDCQTDY 379
L++H +L+PKV G+E + HL + + G +TS S E D Q +
Sbjct: 113 LLIHTDASLRPKV-QGKELPKDAKGHLLEWVQRTYGG------ITSYS---ELKDPQRIH 162

Query: 380 LKLC*ETETTPKDLSARTMGKAQRTYAPSCFMELRGCPASYSAKQGIVL*LTEHLVQVFN 559
L+L + + + + A F E++GC +S + G H+VQ+ +
Sbjct: 163 LQLGENSNSPQNCIPQKDFDATPHLEAEVLFREVKGCTSSSAQSAGAA-----HIVQLLH 217

Query: 560 KHSRCRDDLQEKVNCPFTQ 616
K S +++ +NCP Q
Sbjct: 218 KPSLPITEVKLTLNCPRQQ 236


>tr|A8P9G5|A8P9G5_BRUMA EF hand family protein OS=Brugia malayi
GN=Bm1_19795 PE=4 SV=1
Length = 652

Score = 34.3 bits (77), Expect = 6.7
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2

Query: 434 MGKAQRTYAPSCFMELRGCPASYSAKQGIVL*LTEHLVQVFNKHSRCRDDLQE 592
M + Q+TY CF L A YS G + EH+VQ F + R+ L +
Sbjct: 212 MSEEQKTYYAKCFDHLMKKTAGYSDISGAICGANEHVVQFFKRSGLDREKLSK 264