DK950612 |
Clone id |
TST38A01NGRL0009_C09 |
Library |
TST38 |
Length |
643 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_C09. 5' end sequence. |
Accession |
DK950612 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GACAGGGACTTGGTCTTCCCCCCCGGGCCTTAGGCTTTGGAAGGCAGGCAGCAGGGGCAA AAGCCTGGCTTCAAAAACGCCCCTACCCACCCCTCCACCCACACTCATAATCACTCACTC ACTCTCTCACTCTCTCGCGTGTACATTCTATAACCCCCCCACCCCAAAAACTGCATTGCT CCTCTGGCTATGGTTATGTCGAAGAGTAGCCGTGGATCGCCCTCATTCTACTACTGCTTC CTGCTCCTATGCTCCCTCTTGCTGACCTCTTTCTCCGCCCTCGCCTCTGCAAACAAGAAA GAAAATCCTGACGGGACTAGCACCCACCATTTACACTTCAAGATTAAGTACACAAATGAG ACAAGGCTTTTCAATGCCCCCCAGCAAATTATATCAGTAAATGGCCAAAAAAGAGGGGCA ACTGTGTATGTGCACACAGGCGACTTTGTAAACATCAAGGTCTCCAATCACATCGATGAG AACGTCACGATTCACTGGCATGGGGTGCGGCAGATGTTCACCGTCTGGGCTGACGGTCCG GCTTACATAACCCAATGCCCTTTGCAGCCAAAAGAGCATTACAATCACAACTTCACGGTG GTGCGAGAGCAAGGGACACTTTTCTGGCATGCGCATTTGGGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LMS3 |
Definition |
sp|Q9LMS3|LAC1_ARATH Laccase-1 OS=Arabidopsis thaliana |
Align length |
107 |
Score (bit) |
126.0 |
E-value |
8.0e-29 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9AUI0 |
Definition |
tr|Q9AUI0|Q9AUI0_PINTA Laccase OS=Pinus taeda |
Align length |
106 |
Score (bit) |
128.0 |
E-value |
3.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950612|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_C09, 5' (643 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9AUI0|Q9AUI0_PINTA Laccase OS=Pinus taeda GN=Lac7 PE=2 SV=1 128 3e-28 tr|P93366|P93366_TOBAC Diphenol oxidase OS=Nicotiana tabacum PE=... 128 3e-28 tr|Q9AUI2|Q9AUI2_PINTA Laccase OS=Pinus taeda GN=Lac5 PE=2 SV=1 127 4e-28 tr|A7PIS0|A7PIS0_VITVI Chromosome chr13 scaffold_17, whole genom... 127 4e-28 tr|A7PIP9|A7PIP9_VITVI Chromosome chr13 scaffold_17, whole genom... 127 4e-28 tr|A5BDB6|A5BDB6_VITVI Putative uncharacterized protein OS=Vitis... 127 4e-28 tr|Q9AUI4|Q9AUI4_PINTA Laccase OS=Pinus taeda GN=Lac3 PE=2 SV=1 126 1e-27 tr|A7PIP8|A7PIP8_VITVI Chromosome chr13 scaffold_17, whole genom... 126 1e-27 tr|A5AEC2|A5AEC2_VITVI Putative uncharacterized protein OS=Vitis... 126 1e-27 tr|A7PNP8|A7PNP8_VITVI Chromosome chr8 scaffold_23, whole genome... 126 1e-27 tr|A7NZ75|A7NZ75_VITVI Chromosome chr6 scaffold_3, whole genome ... 126 1e-27 tr|A5C7L3|A5C7L3_VITVI Putative uncharacterized protein OS=Vitis... 126 1e-27 tr|A5ARD9|A5ARD9_VITVI Putative uncharacterized protein OS=Vitis... 126 1e-27 tr|O24042|O24042_LIRTU Laccase OS=Liriodendron tulipifera GN=LAC... 125 3e-27 tr|A7PNP6|A7PNP6_VITVI Chromosome chr8 scaffold_23, whole genome... 124 4e-27 tr|O24044|O24044_LIRTU Laccase OS=Liriodendron tulipifera GN=LAC... 124 6e-27 tr|Q9AUI6|Q9AUI6_PINTA Laccase OS=Pinus taeda GN=Lac1 PE=2 SV=1 123 8e-27 tr|O24043|O24043_LIRTU Laccase OS=Liriodendron tulipifera GN=LAC... 123 8e-27 tr|A5AKT5|A5AKT5_VITVI Putative uncharacterized protein OS=Vitis... 123 8e-27 tr|A5ACW6|A5ACW6_VITVI Putative uncharacterized protein OS=Vitis... 123 8e-27 tr|Q9AUH9|Q9AUH9_PINTA Laccase OS=Pinus taeda GN=Lac8 PE=2 SV=1 123 1e-26 tr|B7FM87|B7FM87_MEDTR Putative uncharacterized protein (Fragmen... 123 1e-26 tr|A7NZA2|A7NZA2_VITVI Chromosome chr6 scaffold_3, whole genome ... 123 1e-26 tr|Q9ZQW3|Q9ZQW3_POPTR Laccase OS=Populus trichocarpa GN=lac3 PE... 122 1e-26 tr|Q9FSC9|Q9FSC9_POPTR Laccase OS=Populus trichocarpa GN=GLac3 P... 122 1e-26 tr|B8AKR2|B8AKR2_ORYSI Putative uncharacterized protein OS=Oryza... 122 2e-26 tr|B7E555|B7E555_ORYSJ cDNA clone:001-023-F09, full insert seque... 122 2e-26 tr|B6SWG3|B6SWG3_MAIZE L-ascorbate oxidase OS=Zea mays PE=2 SV=1 122 2e-26 tr|Q9ZQW2|Q9ZQW2_POPTR Laccase OS=Populus trichocarpa GN=lac110 ... 122 2e-26 tr|A7PNP7|A7PNP7_VITVI Chromosome chr8 scaffold_23, whole genome... 122 2e-26
>tr|Q9AUI0|Q9AUI0_PINTA Laccase OS=Pinus taeda GN=Lac7 PE=2 SV=1 Length = 555
Score = 128 bits (322), Expect = 3e-28 Identities = 55/106 (51%), Positives = 77/106 (72%) Frame = +1
Query: 322 THHLHFKIKYTNETRLFNAPQQIISVNGQKRGATVYVHTGDFVNIKVSNHIDENVTIHWH 501 T H F IK+ N TRL + + I++ NG+ G T++ GD V +KV+NH+ NV+IHWH Sbjct: 26 TRHYKFDIKFKNVTRLCHT-EPIVTANGKFPGPTIHAREGDTVTVKVTNHVTYNVSIHWH 84
Query: 502 GVRQMFTVWADGPAYITQCPLQPKEHYNHNFTVVREQGTLFWHAHL 639 G+RQ+ T WADGPAYITQCP+Q + + +NFT+ ++GTLFWHAH+ Sbjct: 85 GIRQLRTGWADGPAYITQCPIQTGQTFVYNFTITGQRGTLFWHAHI 130
>tr|P93366|P93366_TOBAC Diphenol oxidase OS=Nicotiana tabacum PE=2 SV=1 Length = 557
Score = 128 bits (322), Expect = 3e-28 Identities = 55/104 (52%), Positives = 77/104 (74%) Frame = +1
Query: 328 HLHFKIKYTNETRLFNAPQQIISVNGQKRGATVYVHTGDFVNIKVSNHIDENVTIHWHGV 507 H F + N TRL ++ + I++VNG+ G T+Y GD V +KV NH+ N++IHWHG+ Sbjct: 26 HYKFNVVMKNTTRLCSS-KPIVTVNGKFPGPTIYAREGDTVLVKVVNHVKYNLSIHWHGI 84
Query: 508 RQMFTVWADGPAYITQCPLQPKEHYNHNFTVVREQGTLFWHAHL 639 RQ+ T WADGPAYITQCP+QP ++Y +NFT+ ++GTLFWHAH+ Sbjct: 85 RQLRTGWADGPAYITQCPIQPGQNYVYNFTITGQRGTLFWHAHI 128
>tr|Q9AUI2|Q9AUI2_PINTA Laccase OS=Pinus taeda GN=Lac5 PE=2 SV=1 Length = 591
Score = 127 bits (320), Expect = 4e-28 Identities = 56/107 (52%), Positives = 77/107 (71%) Frame = +1
Query: 319 STHHLHFKIKYTNETRLFNAPQQIISVNGQKRGATVYVHTGDFVNIKVSNHIDENVTIHW 498 +T H F ++ +N TRL N + +I+VNGQ G T++ GD V IK+ NH+ +NVTIHW Sbjct: 44 TTRHYKFNVRQSNVTRLCNT-KPLITVNGQYPGPTIFAQEGDQVIIKLVNHVKDNVTIHW 102
Query: 499 HGVRQMFTVWADGPAYITQCPLQPKEHYNHNFTVVREQGTLFWHAHL 639 HG+RQ+ + WADGP YITQCPLQ Y +NFT+ ++GTL+WHAH+ Sbjct: 103 HGIRQLRSGWADGPGYITQCPLQTGMSYVYNFTITGQRGTLWWHAHI 149
>tr|A7PIS0|A7PIS0_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018452001 PE=4 SV=1 Length = 584
Score = 127 bits (320), Expect = 4e-28 Identities = 58/106 (54%), Positives = 74/106 (69%) Frame = +1
Query: 322 THHLHFKIKYTNETRLFNAPQQIISVNGQKRGATVYVHTGDFVNIKVSNHIDENVTIHWH 501 T H F IK N TRL + + I+SVNGQ G + GD V +KV NH+ NVTIHWH Sbjct: 35 TRHYKFHIKLQNVTRLCHT-KSIVSVNGQFPGPPIIAREGDQVVVKVINHVQNNVTIHWH 93
Query: 502 GVRQMFTVWADGPAYITQCPLQPKEHYNHNFTVVREQGTLFWHAHL 639 GVRQ+ + WADGPAY+TQCP+Q + Y +NFT+ ++GTLFWHAH+ Sbjct: 94 GVRQLRSGWADGPAYVTQCPIQTGQTYVYNFTITGQRGTLFWHAHI 139
>tr|A7PIP9|A7PIP9_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018428001 PE=4 SV=1 Length = 584
Score = 127 bits (320), Expect = 4e-28 Identities = 58/106 (54%), Positives = 74/106 (69%) Frame = +1
Query: 322 THHLHFKIKYTNETRLFNAPQQIISVNGQKRGATVYVHTGDFVNIKVSNHIDENVTIHWH 501 T H F IK N TRL + + I+SVNGQ G + GD V +KV NH+ NVTIHWH Sbjct: 35 TRHYKFNIKLQNVTRLCHT-KSIVSVNGQFPGPHIIAREGDRVVVKVVNHVQNNVTIHWH 93
Query: 502 GVRQMFTVWADGPAYITQCPLQPKEHYNHNFTVVREQGTLFWHAHL 639 GVRQ+ + WADGPAY+TQCP+Q + Y +NFT+ ++GTLFWHAH+ Sbjct: 94 GVRQLRSGWADGPAYVTQCPIQTGQTYVYNFTITGQRGTLFWHAHI 139
>tr|A5BDB6|A5BDB6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037366 PE=4 SV=1 Length = 574
Score = 127 bits (320), Expect = 4e-28 Identities = 58/106 (54%), Positives = 74/106 (69%) Frame = +1
Query: 322 THHLHFKIKYTNETRLFNAPQQIISVNGQKRGATVYVHTGDFVNIKVSNHIDENVTIHWH 501 T H F IK N TRL + + I+SVNGQ G + GD V +KV NH+ NVTIHWH Sbjct: 35 TRHYKFNIKLQNVTRLCHT-KSIVSVNGQFPGPHIIAREGDRVVVKVVNHVQNNVTIHWH 93
Query: 502 GVRQMFTVWADGPAYITQCPLQPKEHYNHNFTVVREQGTLFWHAHL 639 GVRQ+ + WADGPAY+TQCP+Q + Y +NFT+ ++GTLFWHAH+ Sbjct: 94 GVRQLRSGWADGPAYVTQCPIQTGQTYVYNFTITGQRGTLFWHAHI 139
>tr|Q9AUI4|Q9AUI4_PINTA Laccase OS=Pinus taeda GN=Lac3 PE=2 SV=1 Length = 574
Score = 126 bits (317), Expect = 1e-27 Identities = 54/106 (50%), Positives = 76/106 (71%) Frame = +1
Query: 322 THHLHFKIKYTNETRLFNAPQQIISVNGQKRGATVYVHTGDFVNIKVSNHIDENVTIHWH 501 T H HF I+ N TRL + + +I+VNG+ G + GD V I V+NH+ +NVTIHWH Sbjct: 30 TRHYHFHIRLNNITRLCHT-KPLITVNGEYPGPAIIAREGDRVVINVTNHVKDNVTIHWH 88
Query: 502 GVRQMFTVWADGPAYITQCPLQPKEHYNHNFTVVREQGTLFWHAHL 639 G+RQ+ + WADGPAY+TQCP+Q + Y +NFT+ ++GTL+WHAH+ Sbjct: 89 GIRQIRSAWADGPAYVTQCPIQTGQSYIYNFTITGQRGTLWWHAHI 134
>tr|A7PIP8|A7PIP8_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018427001 PE=4 SV=1 Length = 584
Score = 126 bits (317), Expect = 1e-27 Identities = 57/106 (53%), Positives = 74/106 (69%) Frame = +1
Query: 322 THHLHFKIKYTNETRLFNAPQQIISVNGQKRGATVYVHTGDFVNIKVSNHIDENVTIHWH 501 T H F I+ N TRL + + I+SVNGQ G + GD V +KV NH+ NVTIHWH Sbjct: 35 TRHYKFNIELQNVTRLCHT-KSIVSVNGQFPGPPIIAREGDRVVVKVVNHVQNNVTIHWH 93
Query: 502 GVRQMFTVWADGPAYITQCPLQPKEHYNHNFTVVREQGTLFWHAHL 639 GVRQ+ + WADGPAY+TQCP+Q + Y +NFT+ ++GTLFWHAH+ Sbjct: 94 GVRQLRSGWADGPAYVTQCPIQTGQTYVYNFTITGQRGTLFWHAHI 139
>tr|A5AEC2|A5AEC2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033042 PE=4 SV=1 Length = 547
Score = 126 bits (317), Expect = 1e-27 Identities = 57/106 (53%), Positives = 74/106 (69%) Frame = +1
Query: 322 THHLHFKIKYTNETRLFNAPQQIISVNGQKRGATVYVHTGDFVNIKVSNHIDENVTIHWH 501 T H F I+ N TRL + + I+SVNGQ G + GD V +KV NH+ NVTIHWH Sbjct: 35 TRHYKFNIELQNVTRLCHT-KSIVSVNGQFPGPPIIAREGDRVVVKVVNHVQNNVTIHWH 93
Query: 502 GVRQMFTVWADGPAYITQCPLQPKEHYNHNFTVVREQGTLFWHAHL 639 GVRQ+ + WADGPAY+TQCP+Q + Y +NFT+ ++GTLFWHAH+ Sbjct: 94 GVRQLRSGWADGPAYVTQCPIQTGQTYVYNFTITGQRGTLFWHAHI 139
>tr|A7PNP8|A7PNP8_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021344001 PE=4 SV=1 Length = 577
Score = 126 bits (316), Expect = 1e-27 Identities = 57/107 (53%), Positives = 74/107 (69%) Frame = +1
Query: 319 STHHLHFKIKYTNETRLFNAPQQIISVNGQKRGATVYVHTGDFVNIKVSNHIDENVTIHW 498 ST H F IK TRL + + I++VNGQ G + GD V IKV NH+ N+TIHW Sbjct: 30 STRHYKFDIKLQKVTRLCQS-KNIVTVNGQFPGPRIIAREGDRVIIKVVNHVQNNITIHW 88
Query: 499 HGVRQMFTVWADGPAYITQCPLQPKEHYNHNFTVVREQGTLFWHAHL 639 HG+RQ+ + WADGPAYITQCP+Q + Y +NFT+ ++GTLFWHAH+ Sbjct: 89 HGIRQLRSGWADGPAYITQCPIQTGQSYLYNFTITGQRGTLFWHAHI 135
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