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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950617
Clone id TST38A01NGRL0009_C15
Library
Length 428
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_C15. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GAAGGGTATGTTTGTCGCTGGGTATACATACTCTTCTTGGCCTCTTCACTCTCTCCCTCT
GCTGAGTATTTGCCAAGCTGAGCCAAAGAGTTGGCCTTCGCTCTGATGAGGGAGAGAGTG
AAGAGGCCAAGAAGGGTATGTTTGTCGCTGGGTATACATACTAAGAAGATAGTTTGTACC
CATTTTGGTTCTGTGATCTGTCCAATCGTGTGAATCACCACCACTCACTATATGCTCTCT
GCAGTTGTATATGCTGCCTAGTCAGTAAATTGTGAAAGGGATATGAGGTACCAAGTTTTT
AATGTTATGGTAAACCTCCATTTGTTGTATGCTGAGCAACTTGATTTGCCCATGTATCTT
ACATTATTTTTATCCCCCCCCCCTGGCTCTTCTGGCCTTTTCAAAAAAAAAAAAAGGGGA
AAACCCAA
■■Homology search results ■■ -
sp_hit_id Q9ZU52
Definition sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana
Align length 25
Score (bit) 38.9
E-value 0.008
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950617|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_C15, 5'
         (402 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3,...    39   0.008
sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2,...    39   0.008
sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1,...    39   0.008
sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplas...    32   0.75 
sp|Q9CCP1|UVRC_MYCLE UvrABC system protein C OS=Mycobacterium le...    30   2.8  
sp|Q3IK52|RNPA_PSEHT Ribonuclease P protein component OS=Pseudoa...    30   2.8  
sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplast...    30   2.8  
sp|Q1B9D1|UVRC_MYCSS UvrABC system protein C OS=Mycobacterium sp...    30   3.7  
sp|A1UFN2|UVRC_MYCSK UvrABC system protein C OS=Mycobacterium sp...    30   3.7  
sp|A3PZ93|UVRC_MYCSJ UvrABC system protein C OS=Mycobacterium sp...    30   3.7  
sp|Q89AY6|PMBA_BUCBP Protein pmbA homolog OS=Buchnera aphidicola...    30   3.7  
sp|Q66G57|BTUB_YERPS Vitamin B12 transporter btuB OS=Yersinia ps...    30   4.8  
sp|A7FD14|BTUB_YERP3 Vitamin B12 transporter btuB OS=Yersinia ps...    30   4.8  
sp|A1T8K4|UVRC_MYCVP UvrABC system protein C OS=Mycobacterium va...    29   8.2  
sp|A4TC09|UVRC_MYCGI UvrABC system protein C OS=Mycobacterium gi...    29   8.2  
sp|Q6AXR8|ORAI3_RAT Protein orai-3 OS=Rattus norvegicus GN=Orai3...    29   8.3  

>sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3,
           chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1
          Length = 391

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G  S EGE+E+AKKGMFV GYTY
Sbjct: 367 QLGKYSAEGENEDAKKGMFVKGYTY 391


>sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2,
           chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1
          Length = 398

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G  + EGESEEAK+GMFV GYTY
Sbjct: 374 QLGKYTGEGESEEAKEGMFVKGYTY 398


>sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1,
           chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2
          Length = 399

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G  + EGESEEAK+GMFV GYTY
Sbjct: 375 QLGKYTGEGESEEAKEGMFVKGYTY 399


>sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplastic
           (Fragment) OS=Pisum sativum PE=1 SV=1
          Length = 356

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G    +GESEEAKK +FV GY+Y
Sbjct: 332 QLGKYYGDGESEEAKKELFVKGYSY 356


>sp|Q9CCP1|UVRC_MYCLE UvrABC system protein C OS=Mycobacterium
           leprae GN=uvrC PE=3 SV=1
          Length = 647

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 7/40 (17%)
 Frame = +1

Query: 97  FALMRERVKRPRRVCLS-------LGIHTKKIVCTHFGSV 195
           FA+   R KR +R+  S       LG H +K + THFGS+
Sbjct: 570 FAITYHRSKRSKRMTASALDSVPGLGAHRRKALVTHFGSI 609


>sp|Q3IK52|RNPA_PSEHT Ribonuclease P protein component
           OS=Pseudoalteromonas haloplanktis (strain TAC 125)
           GN=rnpA PE=3 SV=1
          Length = 140

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = -3

Query: 136 PFLASSLSPSSERRPTLWLSLANTQ-----QRERVKRPRRVCIPSDKHTL 2
           PF      P+ + +P L L++A  +     QR R+KR  R C   +KH +
Sbjct: 31  PFFTLLAKPNDQDQPRLGLTVAKKRVKKACQRNRIKRLARECFRLNKHNI 80


>sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplastic
           OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1
           SV=2
          Length = 388

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G  + +GE+ EAK+GMFV  Y Y
Sbjct: 364 QLGKYTSDGEAAEAKEGMFVKNYVY 388


>sp|Q1B9D1|UVRC_MYCSS UvrABC system protein C OS=Mycobacterium sp.
           (strain MCS) GN=uvrC PE=3 SV=1
          Length = 676

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 7/40 (17%)
 Frame = +1

Query: 97  FALMRERVKRPRRVCLS-------LGIHTKKIVCTHFGSV 195
           FA+   R KR +R+  S       LG H +K + THFGSV
Sbjct: 582 FAITYHRSKRSKRMTASALDSVRGLGEHRRKALVTHFGSV 621


>sp|A1UFN2|UVRC_MYCSK UvrABC system protein C OS=Mycobacterium sp.
           (strain KMS) GN=uvrC PE=3 SV=1
          Length = 676

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 7/40 (17%)
 Frame = +1

Query: 97  FALMRERVKRPRRVCLS-------LGIHTKKIVCTHFGSV 195
           FA+   R KR +R+  S       LG H +K + THFGSV
Sbjct: 582 FAITYHRSKRSKRMTASALDSVRGLGEHRRKALVTHFGSV 621


>sp|A3PZ93|UVRC_MYCSJ UvrABC system protein C OS=Mycobacterium sp.
           (strain JLS) GN=uvrC PE=3 SV=1
          Length = 676

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 7/40 (17%)
 Frame = +1

Query: 97  FALMRERVKRPRRVCLS-------LGIHTKKIVCTHFGSV 195
           FA+   R KR +R+  S       LG H +K + THFGSV
Sbjct: 582 FAITYHRSKRSKRMTASALDSVRGLGEHRRKALVTHFGSV 621
tr_hit_id Q8GV31
Definition tr|Q8GV31|Q8GV31_SOLBR Plastidic aldolase (Fragment) OS=Solanum brevidens
Align length 25
Score (bit) 41.2
E-value 0.026
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950617|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_C15, 5'
         (402 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8GV31|Q8GV31_SOLBR Plastidic aldolase (Fragment) OS=Solanum ...    41   0.026
tr|Q38JH2|Q38JH2_SOLTU Fructose-bisphosphate aldolase OS=Solanum...    41   0.026
tr|A7P3F7|A7P3F7_VITVI Fructose-bisphosphate aldolase OS=Vitis v...    41   0.026
tr|B8LMQ9|B8LMQ9_PICSI Putative uncharacterized protein OS=Picea...    40   0.057
tr|A9NX65|A9NX65_PICSI Fructose-bisphosphate aldolase OS=Picea s...    40   0.057
tr|A9NVA7|A9NVA7_PICSI Fructose-bisphosphate aldolase OS=Picea s...    40   0.057
tr|A9NUH5|A9NUH5_PICSI Fructose-bisphosphate aldolase OS=Picea s...    40   0.057
tr|Q56ZF2|Q56ZF2_ARATH Fructose bisphosphate aldolase like prote...    39   0.13 
tr|Q41992|Q41992_ARATH ALDOLASE (Fragment) OS=Arabidopsis thalia...    39   0.13 
tr|A9PEU6|A9PEU6_POPTR Fructose-bisphosphate aldolase OS=Populus...    39   0.13 
tr|Q9SXX4|Q9SXX4_NICPA Fructose-bisphosphate aldolase OS=Nicotia...    39   0.17 
tr|Q8LL68|Q8LL68_HEVBR Fructose-bisphosphate aldolase OS=Hevea b...    39   0.17 
tr|A9U3R4|A9U3R4_PHYPA Fructose-bisphosphate aldolase OS=Physcom...    39   0.17 
tr|A9RX76|A9RX76_PHYPA Fructose-bisphosphate aldolase OS=Physcom...    39   0.17 
tr|A5BDH7|A5BDH7_VITVI Fructose-bisphosphate aldolase OS=Vitis v...    39   0.17 
tr|Q94JJ0|Q94JJ0_ORYSJ Fructose-bisphosphate aldolase OS=Oryza s...    37   0.48 
tr|B0YQX2|B0YQX2_GOSAR Fructose-bisphosphate aldolase OS=Gossypi...    37   0.48 
tr|A9TPN5|A9TPN5_PHYPA Fructose-bisphosphate aldolase OS=Physcom...    37   0.48 
tr|A6Y873|A6Y873_GOSAR Fructose-bisphosphate aldolase OS=Gossypi...    37   0.48 
tr|A9NUC9|A9NUC9_PICSI Fructose-bisphosphate aldolase OS=Picea s...    36   0.83 
tr|Q9SXX5|Q9SXX5_NICPA Fructose-bisphosphate aldolase OS=Nicotia...    36   1.1  
tr|P93565|P93565_SOLTU Fructose-bisphosphate aldolase (Fragment)...    36   1.1  
tr|B6UDN1|B6UDN1_MAIZE Fructose-bisphosphate aldolase OS=Zea may...    36   1.1  
tr|B4FV58|B4FV58_MAIZE Putative uncharacterized protein OS=Zea m...    36   1.1  
tr|B0FPD8|B0FPD8_SOLTU Fructose-bisphosphate aldolase OS=Solanum...    36   1.1  
tr|A9T663|A9T663_PHYPA Fructose-bisphosphate aldolase OS=Physcom...    36   1.1  
tr|A7QE19|A7QE19_VITVI Fructose-bisphosphate aldolase OS=Vitis v...    36   1.1  
tr|A9PJ44|A9PJ44_POPJC Fructose-bisphosphate aldolase OS=Populus...    35   1.8  
tr|A9PGW0|A9PGW0_POPTR Fructose-bisphosphate aldolase OS=Populus...    35   1.8  
tr|B7FIL9|B7FIL9_MEDTR Putative uncharacterized protein OS=Medic...    35   2.4  

>tr|Q8GV31|Q8GV31_SOLBR Plastidic aldolase (Fragment) OS=Solanum
           brevidens PE=2 SV=1
          Length = 151

 Score = 41.2 bits (95), Expect = 0.026
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G  S EGESEEAKKGMFV GYTY
Sbjct: 127 QLGKYSAEGESEEAKKGMFVKGYTY 151


>tr|Q38JH2|Q38JH2_SOLTU Fructose-bisphosphate aldolase OS=Solanum
           tuberosum PE=2 SV=1
          Length = 346

 Score = 41.2 bits (95), Expect = 0.026
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G  S EGESEEAKKGMFV GYTY
Sbjct: 322 QLGKYSAEGESEEAKKGMFVKGYTY 346


>tr|A7P3F7|A7P3F7_VITVI Fructose-bisphosphate aldolase OS=Vitis
           vinifera GN=GSVIVT00030426001 PE=3 SV=1
          Length = 393

 Score = 41.2 bits (95), Expect = 0.026
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G  S EGESEEAKKGMFV GYTY
Sbjct: 369 QLGKYSAEGESEEAKKGMFVQGYTY 393


>tr|B8LMQ9|B8LMQ9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 257

 Score = 40.0 bits (92), Expect = 0.057
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G  S EGESEE+KKGMFV GYTY
Sbjct: 233 QLGRYSAEGESEESKKGMFVKGYTY 257


>tr|A9NX65|A9NX65_PICSI Fructose-bisphosphate aldolase OS=Picea
           sitchensis PE=2 SV=1
          Length = 393

 Score = 40.0 bits (92), Expect = 0.057
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G  S EGESEE+KKGMFV GYTY
Sbjct: 369 QLGRYSAEGESEESKKGMFVKGYTY 393


>tr|A9NVA7|A9NVA7_PICSI Fructose-bisphosphate aldolase OS=Picea
           sitchensis PE=2 SV=1
          Length = 393

 Score = 40.0 bits (92), Expect = 0.057
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G  S EGESEE+KKGMFV GYTY
Sbjct: 369 QLGRYSAEGESEESKKGMFVKGYTY 393


>tr|A9NUH5|A9NUH5_PICSI Fructose-bisphosphate aldolase OS=Picea
           sitchensis PE=2 SV=1
          Length = 393

 Score = 40.0 bits (92), Expect = 0.057
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G  S EGESEE+KKGMFV GYTY
Sbjct: 369 QLGRYSAEGESEESKKGMFVKGYTY 393


>tr|Q56ZF2|Q56ZF2_ARATH Fructose bisphosphate aldolase like protein
           (Fragment) OS=Arabidopsis thaliana GN=At2g21330 PE=2
           SV=1
          Length = 49

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G  + EGESEEAK+GMFV GYTY
Sbjct: 25  QLGKYTGEGESEEAKEGMFVKGYTY 49


>tr|Q41992|Q41992_ARATH ALDOLASE (Fragment) OS=Arabidopsis thaliana
           PE=2 SV=1
          Length = 70

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G  S EGE+E+AKKGMFV GYTY
Sbjct: 46  QLGKYSAEGENEDAKKGMFVKGYTY 70


>tr|A9PEU6|A9PEU6_POPTR Fructose-bisphosphate aldolase OS=Populus
           trichocarpa PE=2 SV=1
          Length = 391

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 18/25 (72%), Positives = 20/25 (80%)
 Frame = +3

Query: 87  RVGLRSDEGESEEAKKGMFVAGYTY 161
           ++G  S EGESEEA KGMFV GYTY
Sbjct: 367 QLGRYSAEGESEEATKGMFVKGYTY 391