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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK950620
Clone id TST38A01NGRL0009_C18
Library
Length 691
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_C18. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CGCACTCTCTAGTGTACTTGTGAGTGTGCAGAGCTAAGTTGGCTTTACACACATACGCGC
GCGCACACACCCAAACCCGTGCATTGCCTCCCTCAGCGTCTCCCTGCCTGTGGCCGCCAT
GGCTCAATCTGCCCTTCTCTCCCGCTCCTCAGCGCTCGCTTCCTCCTTCGCCAATTTCCA
GGCAGGCTCCCGTATTGCAGCGTCGCAGGCCGGCGGCCTCTCCTTCGCTCCCCTGCATTC
CTCCAGGGTTTTCCAGTCCTCTCCCTTGAAGACAGTTGCCCTCTTTGGCACCAAGACTCC
CAAGAAGACAACTGGGTCCAAGCCTGCCCCAAAGACGAAGGGAAAGGTTGAGGATGGCAT
TTTCGGGACCTCCGGTGGAATTGGCTTCACCAAGCAAAACGAGCTCTTTGTTGGCCGAGT
CGCCATGCTTGGGTTTGCGGCCTCTATTCTAGGTGAGGCCATCACAGGAAAGGGAACTCT
TGCTCAATTCGACTTCGAGACAGGGTTGCCACTAACTGAGACAGAGCCCCTTCTCCTCTT
CTTCATTTTGTTTACATTGCTGGGTGCTATTGGAGCTCTTGGTGACCGAGGAAAGTTTGT
GGATGATCCTGCCGAGCCCACTGGGCTTGACAGGGCTGTGATTGCTCCCGGCAAGGGTGT
GAAGTCAGCTCTCGGTCTGAAAGAGGGAGGG
■■Homology search results ■■ -
sp_hit_id Q9SMB4
Definition sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum
Align length 115
Score (bit) 122.0
E-value 2.0e-27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950620|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_C18, 5'
         (691 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplasti...   122   2e-27
sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplasti...   120   9e-27
sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplasti...   117   8e-26
sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplasti...   112   2e-24
sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplasti...   111   3e-24
sp|P51532|SMCA4_HUMAN Probable global transcription activator SN...    37   0.13 
sp|Q76KD6|SPERI_HUMAN Speriolin OS=Homo sapiens GN=SPATC1 PE=2 SV=2    37   0.13 
sp|O42854|YFHH_SCHPO SH3 domain-containing protein C23A1.17 OS=S...    36   0.17 
sp|P37370|VRP1_YEAST Verprolin OS=Saccharomyces cerevisiae GN=VR...    36   0.17 
sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3 OS=Oryza sativa subsp....    36   0.17 
sp|Q9NRR4|RNC_HUMAN Ribonuclease 3 OS=Homo sapiens GN=RNASEN PE=...    36   0.22 
sp|O43365|HXA3_HUMAN Homeobox protein Hox-A3 OS=Homo sapiens GN=...    36   0.22 
sp|Q9UBW5|BIN2_HUMAN Bridging integrator 2 OS=Homo sapiens GN=BI...    36   0.22 
sp|Q9Z0G8|WIPF3_RAT WAS/WASL-interacting protein family member 3...    35   0.29 
sp|Q08DG7|HXA3_BOVIN Homeobox protein Hox-A3 OS=Bos taurus GN=HO...    35   0.29 
sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophor...    35   0.29 
sp|A6NGB9|WIPF3_HUMAN WAS/WASL-interacting protein family member...    35   0.38 
sp|O43711|TLX3_HUMAN T-cell leukemia homeobox protein 3 OS=Homo ...    35   0.50 
sp|O14776|TCRG1_HUMAN Transcription elongation regulator 1 OS=Ho...    34   0.64 
sp|Q84L31|RD23C_ARATH Putative DNA repair protein RAD23-3 OS=Ara...    34   0.64 
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 OS=Chlamydo...    34   0.64 
sp|Q9S740|AGP19_ARATH Lysine-rich arabinogalactan protein 19 OS=...    34   0.64 
sp|P55194|3BP1_MOUSE SH3 domain-binding protein 1 OS=Mus musculu...    34   0.64 
sp|O55144|TLX3_MOUSE T-cell leukemia homeobox protein 3 OS=Mus m...    34   0.65 
sp|Q01W31|IF2_SOLUE Translation initiation factor IF-2 OS=Soliba...    34   0.65 
sp|Q8TB24|RIN3_HUMAN Ras and Rab interactor 3 OS=Homo sapiens GN...    34   0.84 
sp|Q3AZB7|IF2_SYNS9 Translation initiation factor IF-2 OS=Synech...    34   0.84 
sp|P02831|HXA3_MOUSE Homeobox protein Hox-A3 OS=Mus musculus GN=...    34   0.84 
sp|Q75E67|ELOA1_ASHGO Elongin-A OS=Ashbya gossypii GN=ELA1 PE=3 ...    34   0.84 
sp|Q9ET54|PALLD_MOUSE Palladin OS=Mus musculus GN=Palld PE=1 SV=2      34   0.85 

>sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic
           OS=Nicotiana tabacum GN=PSBS PE=2 SV=1
          Length = 274

 Score =  122 bits (305), Expect = 2e-27
 Identities = 67/115 (58%), Positives = 72/115 (62%)
 Frame = +2

Query: 347 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 526
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 139

Query: 527 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
                        AIGAL DRGKF+DDPA PTGLD+AVI PGKG KSALGL EGG
Sbjct: 140 PLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGLDKAVIPPGKGFKSALGLSEGG 194



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 493
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 234


>sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum lycopersicum GN=PSBS PE=3 SV=1
          Length = 276

 Score =  120 bits (300), Expect = 9e-27
 Identities = 66/115 (57%), Positives = 71/115 (61%)
 Frame = +2

Query: 347 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 526
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 527 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
                        AIGALGDRGKFVDDP  PTGL++AVI PGK  KSALGL EGG
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGKFVDDPTPPTGLEKAVIPPGKSFKSALGLSEGG 196



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 493
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum sogarandinum GN=PSBS PE=2 SV=1
          Length = 276

 Score =  117 bits (292), Expect = 8e-26
 Identities = 64/115 (55%), Positives = 71/115 (61%)
 Frame = +2

Query: 347 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 526
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 527 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
                        AIGALGDRG+F+DDPA  TGL++AVI PGK  KSALGL EGG
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGRFIDDPAPATGLEKAVIPPGKSFKSALGLSEGG 196



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 493
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplastic
           OS=Arabidopsis thaliana GN=PSBS PE=1 SV=1
          Length = 265

 Score =  112 bits (279), Expect = 2e-24
 Identities = 64/115 (55%), Positives = 71/115 (61%)
 Frame = +2

Query: 347 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 526
           VED            K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +           
Sbjct: 72  VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 527 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
                        AIGALGDRGKFVDDP  PTGL++AVI PGK V+SALGLKE G
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSALGLKEQG 184



 Score = 48.9 bits (115), Expect = 3e-05
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 493
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224


>sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic
           OS=Spinacia oleracea GN=PSBS PE=1 SV=1
          Length = 274

 Score =  111 bits (278), Expect = 3e-24
 Identities = 72/163 (44%), Positives = 85/163 (52%)
 Frame = +2

Query: 203 SQAGGLSFAPLHSSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXX 382
           S    L F+PL SS    S+  KT+ALF                    VED         
Sbjct: 37  SSTSNLFFSPLPSSSSSSSTVFKTLALFKSKAKAPKKVEKPKLK----VEDGLFGTSGGI 92

Query: 383 XXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXX 562
              K+NELFVGRVAM+GFAAS+LGE ITGKG L+Q +                       
Sbjct: 93  GFTKENELFVGRVAMIGFAASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLL 152

Query: 563 XAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
            AIGALGDRG+FVD+P   TGL++AVI PGK V+SALGLK  G
Sbjct: 153 GAIGALGDRGRFVDEPT--TGLEKAVIPPGKDVRSALGLKTKG 193



 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 493
           K NELFVGR+A LGFA S++GE ITGKG LAQ +
Sbjct: 200 KSNELFVGRLAQLGFAFSLIGEIITGKGALAQLN 233


>sp|P51532|SMCA4_HUMAN Probable global transcription activator
           SNF2L4 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
          Length = 1647

 Score = 36.6 bits (83), Expect = 0.13
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +3

Query: 87  PPSASPCLWP--PWLNLPF-SPAPQRSLPPSPISRQAPVLQRRRPAASPSLP 233
           PP   P  WP  P  N    +  PQ+ +PP P  R +P      PAASP +P
Sbjct: 276 PPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMP 327


>sp|Q76KD6|SPERI_HUMAN Speriolin OS=Homo sapiens GN=SPATC1 PE=2 SV=2
          Length = 591

 Score = 36.6 bits (83), Expect = 0.13
 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 14/124 (11%)
 Frame = -2

Query: 687 PSFRPRADFTPLPGAI-TALSSPVGSAGSS--TNFPRSPRA-PIAPSNVNKMKKRRRGSV 520
           PS  P +  +PL G + T LS P  ++ SS  T+F  SP A P+  +  + +     G++
Sbjct: 106 PSATPGSLMSPLTGTLSTLLSGPAPTSQSSPLTSFLTSPIAGPLTGTLASSLGLPSTGTL 165

Query: 519 ---SVSGNPVSKSN*ARVPFPVMASPRIEAANP---SMATRPTKSSFCLVKP----IPPE 370
              S+   PV+ S  + +  PVM +  +  ++P   S AT P  S   L  P    + PE
Sbjct: 166 TPSSLVAGPVAMSQSSPLIAPVMGTVAVSLSSPLLSSTATPPGVSQNLLANPMSNLVLPE 225

Query: 369 VPKM 358
            P++
Sbjct: 226 APRL 229


>sp|O42854|YFHH_SCHPO SH3 domain-containing protein C23A1.17
            OS=Schizosaccharomyces pombe GN=SPAC23A1.17 PE=1 SV=1
          Length = 1611

 Score = 36.2 bits (82), Expect = 0.17
 Identities = 41/141 (29%), Positives = 52/141 (36%), Gaps = 6/141 (4%)
 Frame = -2

Query: 690  PPSFRPRADFTPLPGAITALSSPVGSAGSSTNFPRSPR-APIAPSNVNKMKKRRRGSVSV 514
            PP   P AD  P+P  + + + PV    S+   P+S   AP AP  V           + 
Sbjct: 1022 PPVPLPSADAPPIP--VPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079

Query: 513  SGNPVSKSN*ARVPFPVMASPRIEAANPSMATRPTKSSFCLVKPIP-----PEVPKMPSS 349
            SG P        VP P    P      PS+A  P       V P+P     P VPK   +
Sbjct: 1080 SGAP-------PVPAPSGIPP---VPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVA 1129

Query: 348  TFPFVFGAGLDPVVFLGVLVP 286
              P    +G  PV    V  P
Sbjct: 1130 APPVPVPSGAPPVPKPSVAAP 1150



 Score = 32.3 bits (72), Expect = 2.5
 Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
 Frame = -2

Query: 690  PPSFRPRADFTPLPG---AITALSSPVGSAGSSTNFPRSPRAPIAPSNVNKMKKRRRGSV 520
            PP  +P     P+P    A+  + +P G+         +P  P+ PS    + K      
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPV-PSGAPPVPKP----- 1145

Query: 519  SVSGNPV-SKSN*ARVPFPVMASPRIEAANPSMATRPTKSSFCLVKPIPP--EVPKMP 355
            SV+  PV + S    VP P +A+P + A  PS    P       V P+PP  E P +P
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSVAAPPVPA--PSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201



 Score = 31.2 bits (69), Expect = 5.5
 Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 4/116 (3%)
 Frame = +3

Query: 87   PPSASPCLWPPWLNLPFSPAPQRSLPPSPISRQAPVLQRRRPAASPSLPCIPPGFXXXXX 266
            P  A+P +  P   +P  P P   +PP P   +AP +    P  S  +P +PP       
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV----PKPSVGVPPVPPPSTAPPV 1219

Query: 267  XXXXXXXXXXXXXXXXGPSLPQRRRERLRMA---FSGP-PVELASPSKTSSLLAES 422
                             P +P    E   ++    S P P   ASPS TSS +A +
Sbjct: 1220 PTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMASA 1275


>sp|P37370|VRP1_YEAST Verprolin OS=Saccharomyces cerevisiae GN=VRP1
           PE=1 SV=2
          Length = 817

 Score = 36.2 bits (82), Expect = 0.17
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
 Frame = -2

Query: 633 LSSPVGSAGSSTNFPRSPRAPIAPSNVNKMKKRRRGSVSVSGNPVSK---SN*ARVPFPV 463
           +SS  GS+G+ ++   S  AP  P     M   + G +   G P  K   +N +  P P 
Sbjct: 62  VSSASGSSGTVSSKGPSMSAPPIPG----MGAPQLGDILAGGIPKLKHINNNASTKPSPS 117

Query: 462 MASPRIEAANPSMATRPTKSSFCLVKPIPPEVPKMPSSTFPFVFGAGLDPV 310
            ++P I  A PS+A  P  ++     P  P +P   +   P +  +   P+
Sbjct: 118 ASAPPIPGAVPSVAAPPIPNAPLSPAPAVPSIPSSSAPPIPDIPSSAAPPI 168


>sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3 OS=Oryza sativa subsp.
            japonica GN=FH3 PE=2 SV=2
          Length = 1234

 Score = 36.2 bits (82), Expect = 0.17
 Identities = 31/113 (27%), Positives = 42/113 (37%), Gaps = 7/113 (6%)
 Frame = -2

Query: 657  PLPGAITALSSPVGSAGSSTNFPRSPRAPIAPSN-VNKMKKRRRGSVSVSGNPVSKSN*A 481
            P P   ++  +P G+A SS   P  P  P+ P+N  N               P ++SN  
Sbjct: 668  PPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGP 727

Query: 480  RVPFPVMASPRIEAANPSMATRPTKSSFCLVK------PIPPEVPKMPSSTFP 340
              P P +  P   AAN      P        K      P PP+ PK P +  P
Sbjct: 728  SAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPPPPQAPKPPGTVPP 780



 Score = 30.4 bits (67), Expect = 9.3
 Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +3

Query: 75  TRALPPSASPCLWPPWLNLP-FSPAPQRSLPPSPISRQAPVLQRRRPAASPSLPCIPP 245
           T A PP   P   PP  N P FSP P    PP P     P+ Q    ++ P  P  PP
Sbjct: 540 TAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPP-----PLPQSNYASSQPPPPPPPP 592
tr_hit_id Q2LAH0
Definition tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component OS=Nicotiana benthamiana
Align length 115
Score (bit) 123.0
E-value 1.0e-26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK950620|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_C18, 5'
         (691 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa compone...   123   1e-26
tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa compone...   120   8e-26
tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding prote...   120   8e-26
tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert seque...   115   3e-24
tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza...   115   3e-24
tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossyp...   114   4e-24
tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossyp...   114   4e-24
tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein OS=Gossyp...   113   1e-23
tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein (At1g445...   112   3e-23
tr|Q56XH2|Q56XH2_ARATH Photosystem II chlorophyll-binding protei...   112   3e-23
tr|Q3ECX1|Q3ECX1_ARATH Uncharacterized protein At1g44575.2 OS=Ar...   112   3e-23
tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein ...   112   3e-23
tr|A7NVD7|A7NVD7_VITVI Chromosome chr18 scaffold_1, whole genome...   110   6e-23
tr|Q6WFB1|Q6WFB1_MAIZE Photosystem II subunit PsbS OS=Zea mays P...   109   2e-22
tr|Q1EMP1|Q1EMP1_PLAMJ Photosystem II, 22 kDa Protein OS=Plantag...   109   2e-22
tr|B6TKD1|B6TKD1_MAIZE Photosystem II 22 kDa protein OS=Zea mays...   109   2e-22
tr|Q7XSS8|Q7XSS8_ORYSJ OSJNBa0039K24.28 protein (Putative unchar...   108   3e-22
tr|Q40716|Q40716_ORYSJ 22 kDa protein of photosystem II OS=Oryza...   108   3e-22
tr|Q259V3|Q259V3_ORYSA B0518A01.1 protein (H0814G11.22 protein) ...   108   3e-22
tr|Q0J8R9|Q0J8R9_ORYSJ Os04g0690800 protein OS=Oryza sativa subs...   108   3e-22
tr|A2XZ94|A2XZ94_ORYSI Putative uncharacterized protein OS=Oryza...   108   3e-22
tr|A9NK12|A9NK12_PICSI Putative uncharacterized protein OS=Picea...   108   4e-22
tr|A9PIG1|A9PIG1_POPTR Putative uncharacterized protein OS=Popul...   107   5e-22
tr|B7FJ53|B7FJ53_MEDTR Putative uncharacterized protein (Fragmen...   106   2e-21
tr|Q2VL34|Q2VL34_9LILI PSII subunit PsbS (Fragment) OS=Xerophyta...   104   5e-21
tr|A9NYQ2|A9NYQ2_PICSI Putative uncharacterized protein OS=Picea...    96   3e-18
tr|A8HPM5|A8HPM5_CHLRE Chloroplast photosystem II-associated 22 ...    58   7e-07
tr|A8HPM2|A8HPM2_CHLRE Chloroplast photosystem II-associated 22 ...    58   7e-07
tr|A4QPL3|A4QPL3_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    57   1e-06
tr|A4QPL4|A4QPL4_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    57   1e-06

>tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS1 PE=2 SV=1
          Length = 277

 Score =  123 bits (309), Expect = 1e-26
 Identities = 67/115 (58%), Positives = 72/115 (62%)
 Frame = +2

Query: 347 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 526
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 83  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 142

Query: 527 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
                        AIGALGDRGKF+DDP  PTGLD+AVI PGKG KSALGL EGG
Sbjct: 143 PLLLFFILFNLLGAIGALGDRGKFIDDPTPPTGLDKAVIPPGKGFKSALGLSEGG 197



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 493
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 204 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 237


>tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS2 PE=4 SV=1
          Length = 274

 Score =  120 bits (301), Expect = 8e-26
 Identities = 66/115 (57%), Positives = 71/115 (61%)
 Frame = +2

Query: 347 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 526
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 139

Query: 527 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
                        AIGALGDRGKF+DDP   TGLD+AVI PGKG KSALGL EGG
Sbjct: 140 PLLLFFILFNLLGAIGALGDRGKFIDDPVPATGLDKAVIPPGKGFKSALGLSEGG 194



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 493
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 234


>tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding protein
           (Fragment) OS=Solanum nigrum GN=PsbS PE=4 SV=1
          Length = 268

 Score =  120 bits (301), Expect = 8e-26
 Identities = 66/115 (57%), Positives = 72/115 (62%)
 Frame = +2

Query: 347 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 526
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 527 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
                        AIGALGDRGKFVDDPA PTGL++AVI PG+  KSALGL EGG
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGKFVDDPAPPTGLEKAVIPPGRSFKSALGLSEGG 196



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 493
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0039A07.6 PE=2 SV=1
          Length = 268

 Score =  115 bits (288), Expect = 3e-24
 Identities = 73/151 (48%), Positives = 81/151 (53%)
 Frame = +2

Query: 239 SSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXKQNELFVGR 418
           SS + ++  +KTVALF                     ED            K+NELFVGR
Sbjct: 39  SSSLGRAVSVKTVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGR 98

Query: 419 VAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAIGALGDRGKF 598
           VAMLGFAASILGEAITGKG LAQ +                        AIGALGDRG F
Sbjct: 99  VAMLGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSF 158

Query: 599 VDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
           VDD    TGLD+AVIAPGKG +SALGL EGG
Sbjct: 159 VDD-QPVTGLDKAVIAPGKGFRSALGLSEGG 188



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 493
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 195 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 228


>tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04589 PE=4 SV=1
          Length = 268

 Score =  115 bits (288), Expect = 3e-24
 Identities = 73/151 (48%), Positives = 81/151 (53%)
 Frame = +2

Query: 239 SSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXKQNELFVGR 418
           SS + ++  +KTVALF                     ED            K+NELFVGR
Sbjct: 39  SSSLGRAVSVKTVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGR 98

Query: 419 VAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAIGALGDRGKF 598
           VAMLGFAASILGEAITGKG LAQ +                        AIGALGDRG F
Sbjct: 99  VAMLGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSF 158

Query: 599 VDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
           VDD    TGLD+AVIAPGKG +SALGL EGG
Sbjct: 159 VDD-QPVTGLDKAVIAPGKGFRSALGLSEGG 188



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 493
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 195 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 228


>tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossypium
           hirsutum PE=4 SV=1
          Length = 278

 Score =  114 bits (286), Expect = 4e-24
 Identities = 64/115 (55%), Positives = 72/115 (62%)
 Frame = +2

Query: 347 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 526
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 527 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
                        AIGALGDRGKFVD+P  PTG++ AVI PGKG++ ALGLKEGG
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDEP--PTGIEGAVIPPGKGIRGALGLKEGG 197



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 32/75 (42%), Positives = 36/75 (48%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAI 571
           K NELFVGR+A LG A S++GE ITGKG LAQ +                        AI
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAI 263

Query: 572 GALGDRGKFVDDPAE 616
                 GKFV D AE
Sbjct: 264 NP--GTGKFVTDEAE 276


>tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossypium
           raimondii PE=4 SV=1
          Length = 278

 Score =  114 bits (286), Expect = 4e-24
 Identities = 64/115 (55%), Positives = 72/115 (62%)
 Frame = +2

Query: 347 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 526
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 527 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
                        AIGALGDRGKFVD+P  PTG++ AVI PGKG++ ALGLKEGG
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDEP--PTGIEGAVIPPGKGIRGALGLKEGG 197



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 32/75 (42%), Positives = 36/75 (48%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAI 571
           K NELFVGR+A LG A S++GE ITGKG LAQ +                        AI
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAI 263

Query: 572 GALGDRGKFVDDPAE 616
                 GKFV D AE
Sbjct: 264 NP--GTGKFVTDEAE 276


>tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein
           OS=Gossypioides kirkii PE=4 SV=1
          Length = 277

 Score =  113 bits (283), Expect = 1e-23
 Identities = 64/115 (55%), Positives = 72/115 (62%)
 Frame = +2

Query: 347 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 526
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 527 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
                        AIGALGDRG+FVD+P  PTG++ AVI PGKGV+ ALGLKEGG
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGRFVDEP--PTGVEGAVIPPGKGVRGALGLKEGG 197



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 493
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 237


>tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein
           (At1g44575/T18F15) OS=Arabidopsis thaliana PE=2 SV=1
          Length = 265

 Score =  112 bits (279), Expect = 3e-23
 Identities = 64/115 (55%), Positives = 71/115 (61%)
 Frame = +2

Query: 347 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 526
           VED            K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +           
Sbjct: 72  VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 527 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
                        AIGALGDRGKFVDDP  PTGL++AVI PGK V+SALGLKE G
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSALGLKEQG 184



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 493
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224


>tr|Q56XH2|Q56XH2_ARATH Photosystem II chlorophyll-binding protein
           PsbS OS=Arabidopsis thaliana GN=At1g44575 PE=2 SV=1
          Length = 265

 Score =  112 bits (279), Expect = 3e-23
 Identities = 64/115 (55%), Positives = 71/115 (61%)
 Frame = +2

Query: 347 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 526
           VED            K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +           
Sbjct: 72  VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 527 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGG 691
                        AIGALGDRGKFVDDP  PTGL++AVI PGK V+SALGLKE G
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSALGLKEQG 184



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +2

Query: 392 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 493
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224