DK950621 |
Clone id |
TST38A01NGRL0009_C19 |
Library |
TST38 |
Length |
655 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_C19. 5' end sequence. |
Accession |
DK950621 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL20Contig1 |
Sequence |
CATCTCCATCACACCGGCAACTAGCTCTGCAAAGCCATTGGTGGTGCACGCTTCGGAGGA TGAGTCGAAGCAGACCAAGAAGGATAAATGGGCAGGACTTGCATACGACACTTCCGATGA TCAGCAAGACATTACAAGAGGGAAAGGGATGGTGGATGCCCTCTTCCAAGGGGCAGTTGG CTTGGGTACCCAGCATGCTGTCATGAGTTCCTACGAGTACATCAGCACTGGTCAGAGGAC TTTCCAGATGGACAACATGAAGGATGGGTACTACATCGCACCGGCTTTCATGGACAAGTT GGTGGTGCACATTGCCAAGAACTTTATGAACCTTCCCAATATTAAGATTCCTTTGATTCT TGGTATTTGGGGTGGAAAAGGACAAGGAAAATCTTTCCAGTGTGAACTAGTGTTCTCAAA GCTTGGAATCAACCCCATCATGATGAGTGCTGGTGAGCTCGAGAGTGGAAATGCTGGTGA ACCCGCCAAGCTCATTCGACAGAGATACCGTGAAGCTGCGGATGTGATTCGAAAGAAAGG AAAGATGTGTTGTCTCTTTATCAATGATCTTGACGCTGGAGCTGGTCGCATGGGTGGAAC AACACAATATACTGTCAACAATCAGATGGTGAATGCAACCCTCATGAACATTGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P10896 |
Definition |
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana |
Align length |
198 |
Score (bit) |
347.0 |
E-value |
4.0e-95 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950621|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_C19, 5' (655 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ... 347 4e-95 sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase... 347 4e-95 sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase... 347 4e-95 sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ... 346 7e-95 sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ... 343 5e-94 sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ... 343 6e-94 sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ... 339 7e-93 sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase... 338 1e-92 sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 335 1e-91 sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ... 334 3e-91 sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ... 333 4e-91 sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase... 333 5e-91 sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ... 332 8e-91 sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 331 2e-90 sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ... 317 5e-86 sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ... 279 8e-75 sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ... 186 1e-46 sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ... 185 2e-46 sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ... 127 4e-29 sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ... 74 7e-13 sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_... 46 2e-04 sp|O74445|PRS10_SCHPO Probable 26S protease subunit rpt4 OS=Schi... 42 0.002 sp|P62335|PRS10_SPETR 26S protease regulatory subunit S10B OS=Sp... 40 0.014 sp|P62334|PRS10_MOUSE 26S protease regulatory subunit S10B OS=Mu... 40 0.014 sp|P62333|PRS10_HUMAN 26S protease regulatory subunit S10B OS=Ho... 40 0.014 sp|Q2KIW6|PRS10_BOVIN 26S protease regulatory subunit S10B OS=Bo... 40 0.014 sp|Q9HPF0|CDCH_HALSA Protein cdcH OS=Halobacterium salinarium GN... 40 0.014 sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing prote... 39 0.018 sp|A6UQT3|PSMR_METVS Proteasome-activating nucleotidase OS=Metha... 39 0.031 sp|Q6LWR0|PSMR_METMP Proteasome-activating nucleotidase OS=Metha... 38 0.041
>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2 Length = 474
Score = 347 bits (889), Expect = 4e-95 Identities = 167/198 (84%), Positives = 181/198 (91%) Frame = +2
Query: 62 ESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRT 241 E KQT D+W GLAYDTSDDQQDITRGKGMVD++FQ +G GT HAV+SSYEY+S G R Sbjct: 62 EDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQ 121
Query: 242 FQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSK 421 + +DNM DG+YIAPAFMDKLVVHI KNF+ LPNIK+PLILGIWGGKGQGKSFQCELV +K Sbjct: 122 YNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAK 181
Query: 422 LGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGT 601 +GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGAGRMGGT Sbjct: 182 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADLI-KKGKMCCLFINDLDAGAGRMGGT 240
Query: 602 TQYTVNNQMVNATLMNIA 655 TQYTVNNQMVNATLMNIA Sbjct: 241 TQYTVNNQMVNATLMNIA 258
>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1 Length = 435
Score = 347 bits (889), Expect = 4e-95 Identities = 172/214 (80%), Positives = 185/214 (86%) Frame = +2
Query: 14 PATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQ 193 P SS +V E +QT KDKW GLAYD SDDQQDITRGKGMVD LFQ + GT Sbjct: 46 PKASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTH 105
Query: 194 HAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWG 373 +AVMSSY+YIS G R + +DN DG+YIAPAFMDKLVVHI KNF++LPNIKIPLILGIWG Sbjct: 106 YAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWG 165
Query: 374 GKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCC 553 GKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCC Sbjct: 166 GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII-KKGKMCC 224
Query: 554 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA Sbjct: 225 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 258
>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1 Length = 476
Score = 347 bits (889), Expect = 4e-95 Identities = 172/214 (80%), Positives = 185/214 (86%) Frame = +2
Query: 14 PATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQ 193 P SS +V E +QT KDKW GLAYD SDDQQDITRGKGMVD LFQ + GT Sbjct: 46 PKASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTH 105
Query: 194 HAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWG 373 +AVMSSY+YIS G R + +DN DG+YIAPAFMDKLVVHI KNF++LPNIKIPLILGIWG Sbjct: 106 YAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWG 165
Query: 374 GKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCC 553 GKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCC Sbjct: 166 GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII-KKGKMCC 224
Query: 554 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA Sbjct: 225 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 258
>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1 Length = 413
Score = 346 bits (887), Expect = 7e-95 Identities = 166/202 (82%), Positives = 182/202 (90%) Frame = +2
Query: 50 ASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYIST 229 A +DE KQT+KDKW GLA+DTSDDQQDITRGKG+ D LFQ +G GT +AV+SSYEYIS Sbjct: 55 AEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISA 114
Query: 230 GQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCEL 409 G R + DN DG+YIAPAFMDKL VHI KNF+ LPNIK+PLILG+WGGKGQGKSFQCEL Sbjct: 115 GLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCEL 174
Query: 410 VFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGR 589 VF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGAGR Sbjct: 175 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII-KKGKMCCLFINDLDAGAGR 233
Query: 590 MGGTTQYTVNNQMVNATLMNIA 655 +GGTTQYTVNNQMVNATLMNIA Sbjct: 234 LGGTTQYTVNNQMVNATLMNIA 255
>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2 Length = 466
Score = 343 bits (880), Expect = 5e-94 Identities = 167/199 (83%), Positives = 179/199 (89%) Frame = +2
Query: 59 DESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQR 238 DE KQT +D+W GLAYD SDDQQDITRGKG VD+LFQ G GT AV+SSYEY+S G R Sbjct: 52 DEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLR 111
Query: 239 TFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFS 418 T+ DN G+YIAPAFMDKLVVHI+KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+ Sbjct: 112 TYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFA 171
Query: 419 KLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGG 598 K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGAGRMGG Sbjct: 172 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII-KKGKMCCLFINDLDAGAGRMGG 230
Query: 599 TTQYTVNNQMVNATLMNIA 655 TTQYTVNNQMVNATLMNIA Sbjct: 231 TTQYTVNNQMVNATLMNIA 249
>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1 Length = 437
Score = 343 bits (879), Expect = 6e-94 Identities = 171/215 (79%), Positives = 186/215 (86%) Frame = +2
Query: 11 TPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGT 190 T + S+ L + AS DE KQT KD+W GLA+DTSDDQQDITRGKG VD+LFQ G GT Sbjct: 45 TNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGT 104
Query: 191 QHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIW 370 A+MSSYEYISTG R + DN DGYYIAPAFMDKLVVHI KNFM LPN+K+PLILGIW Sbjct: 105 HFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIW 164
Query: 371 GGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMC 550 GGKGQGKSFQCELVF+K+ I+PIMMSAGELESGNAGEPAKLIRQRYREAAD+IR KGKMC Sbjct: 165 GGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMC 223
Query: 551 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655 LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIA Sbjct: 224 ALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIA 258
>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2 Length = 439
Score = 339 bits (870), Expect = 7e-93 Identities = 169/210 (80%), Positives = 185/210 (88%) Frame = +2
Query: 26 SAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVM 205 S K + +ES+QT KD+W GLAYD SDDQQDITRGKGMVD LFQ + GT +AVM Sbjct: 54 SFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVM 113
Query: 206 SSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQ 385 SSYEY+STG R Q+DN+KDG+YIAPAF+DKLVVHI KNFM LPNIK+PLILGIWGGKGQ Sbjct: 114 SSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQ 171
Query: 386 GKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFIN 565 GKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC LFIN Sbjct: 172 GKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLI-AKGKMCALFIN 230
Query: 566 DLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655 DLDAGAGR+GGTTQYTVNNQMVNATLMNIA Sbjct: 231 DLDAGAGRLGGTTQYTVNNQMVNATLMNIA 260
>sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1 Length = 464
Score = 338 bits (868), Expect = 1e-92 Identities = 167/212 (78%), Positives = 183/212 (86%) Frame = +2
Query: 20 TSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHA 199 +S A V A+E+ ++ DKW GLAYD SDDQQDITRGKG+VD+LFQ G GT A Sbjct: 38 SSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEA 97
Query: 200 VMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGK 379 V+SSYEY+S G R + DN G+YIAPAFMDKLVVH++KNFM LPNIKIPLILGIWGGK Sbjct: 98 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGK 157
Query: 380 GQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLF 559 GQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLF Sbjct: 158 GQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI-KKGKMCCLF 216
Query: 560 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA Sbjct: 217 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 248
>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 442
Score = 335 bits (860), Expect = 1e-91 Identities = 162/199 (81%), Positives = 174/199 (87%) Frame = +2
Query: 59 DESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQR 238 D KQT D+W GL D SDDQQDITRGKGMVD+LFQ G GT HAV+ SYEY+S G R Sbjct: 65 DPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLR 124
Query: 239 TFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFS 418 + +DN DG+YIAPAFMDKLVVHI KNF+ LPNIK+PLILGIWGGKGQGKSFQCELVF Sbjct: 125 QYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFR 184
Query: 419 KLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGG 598 K+GINPIMMSAGELESGNAGEPAKLIRQRYREAA++IR KG MCCLFINDLDAGAGRMGG Sbjct: 185 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIR-KGNMCCLFINDLDAGAGRMGG 243
Query: 599 TTQYTVNNQMVNATLMNIA 655 TTQYTVNNQMVNATLMNIA Sbjct: 244 TTQYTVNNQMVNATLMNIA 262
>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1 Length = 441
Score = 334 bits (856), Expect = 3e-91 Identities = 161/212 (75%), Positives = 187/212 (88%) Frame = +2
Query: 20 TSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHA 199 + S K + +E++QT+ D+W GLAYD SDDQQDITRGKG+VD+LFQ + GT +A Sbjct: 52 SGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYA 111
Query: 200 VMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGK 379 V+SS++Y+S G R + DN+KDG+YIAPAF+DKLVVHIAKNFM LPNIK+PLILG+WGGK Sbjct: 112 VISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGK 171
Query: 380 GQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLF 559 GQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREA+D+I KKGKMC LF Sbjct: 172 GQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDLI-KKGKMCVLF 230
Query: 560 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655 INDLDAGAGR+GGTTQYTVNNQMVNATLMNIA Sbjct: 231 INDLDAGAGRLGGTTQYTVNNQMVNATLMNIA 262
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9ATC2 |
Definition |
tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedeschia aethiopica |
Align length |
212 |
Score (bit) |
353.0 |
E-value |
5.0e-96 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950621|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_C19, 5' (655 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 353 5e-96 tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 353 5e-96 tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul... 353 7e-96 tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome... 353 7e-96 tr|Q9ATC0|Q9ATC0_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 352 1e-95 tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul... 351 2e-95 tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul... 351 2e-95 tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car... 350 3e-95 tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car... 350 3e-95 tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ... 350 4e-95 tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis... 350 4e-95 tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom... 350 6e-95 tr|A9TLG8|A9TLG8_PHYPA Predicted protein OS=Physcomitrella paten... 349 1e-94 tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten... 348 1e-94 tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t... 348 1e-94 tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten... 348 2e-94 tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 347 5e-94 tr|Q3EBJ5|Q3EBJ5_ARATH Uncharacterized protein At2g39730.3 OS=Ar... 347 5e-94 tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul... 347 5e-94 tr|Q9AXG0|Q9AXG0_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 346 6e-94 tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car... 346 6e-94 tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car... 346 6e-94 tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 346 8e-94 tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 344 2e-93 tr|Q308Y6|Q308Y6_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 343 4e-93 tr|A9UHW7|A9UHW7_IPOBA Rubisco activase OS=Ipomoea batatas GN=rc... 343 4e-93 tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza... 343 5e-93 tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen... 343 5e-93 tr|Q9M4V3|Q9M4V3_WHEAT Ribulose bisphosphate carboxylase activas... 342 9e-93 tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car... 342 9e-93
>tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedeschia aethiopica GN=rca1 PE=2 SV=1 Length = 436
Score = 353 bits (906), Expect = 5e-96 Identities = 177/212 (83%), Positives = 190/212 (89%) Frame = +2
Query: 20 TSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHA 199 TS+ V+ A DESKQTK D+WAGL DTSDDQQDITRGKGMVD+LFQ +G GT + Sbjct: 10 TSTGTLKVMAADLDESKQTKTDRWAGLYTDTSDDQQDITRGKGMVDSLFQAPMGDGTHNP 69
Query: 200 VMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGK 379 V+SSYEYISTG R+F +DN +G YIAPAFMDKLVVHI KNFMNLPNIKIPLILGIWGGK Sbjct: 70 VLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNIKIPLILGIWGGK 129
Query: 380 GQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLF 559 GQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IR KGKMCCLF Sbjct: 130 GQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLF 188
Query: 560 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA Sbjct: 189 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 220
>tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedeschia aethiopica GN=rca4 PE=2 SV=1 Length = 435
Score = 353 bits (906), Expect = 5e-96 Identities = 177/212 (83%), Positives = 190/212 (89%) Frame = +2
Query: 20 TSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHA 199 TS+ V+ A DESKQTK D+WAGL DTSDDQQDITRGKGMVD+LFQ +G GT + Sbjct: 46 TSTGTLKVMAADLDESKQTKTDRWAGLYTDTSDDQQDITRGKGMVDSLFQAPMGDGTHNP 105
Query: 200 VMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGK 379 V+SSYEYISTG R+F +DN +G YIAPAFMDKLVVHI KNFMNLPNIKIPLILGIWGGK Sbjct: 106 VLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNIKIPLILGIWGGK 165
Query: 380 GQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLF 559 GQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IR KGKMCCLF Sbjct: 166 GQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLF 224
Query: 560 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA Sbjct: 225 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 256
>tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 461
Score = 353 bits (905), Expect = 7e-96 Identities = 170/211 (80%), Positives = 188/211 (89%) Frame = +2
Query: 23 SSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAV 202 SS VV DE KQT+KD+W GL D SDDQQDITRGKGMVD+LFQ G GT + V Sbjct: 51 SSGSFKVVAEEYDEEKQTEKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPV 110
Query: 203 MSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKG 382 +SSYEY+S G RT+ +DNM DGYYIAPAFMDK+VVHI+KNFM+LPNIK+PLILGIWGGKG Sbjct: 111 LSSYEYLSQGLRTYNLDNMMDGYYIAPAFMDKIVVHISKNFMSLPNIKVPLILGIWGGKG 170
Query: 383 QGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFI 562 QGKSFQCELVF+K+GI+PIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KKGKMCCLFI Sbjct: 171 QGKSFQCELVFAKMGISPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKKGKMCCLFI 230
Query: 563 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655 NDLDAGAGR+GGTTQYTVNNQMVNATLMNIA Sbjct: 231 NDLDAGAGRLGGTTQYTVNNQMVNATLMNIA 261
>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001 PE=4 SV=1 Length = 474
Score = 353 bits (905), Expect = 7e-96 Identities = 176/214 (82%), Positives = 189/214 (88%) Frame = +2
Query: 14 PATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQ 193 P TSS VV A DE KQT KDKW GLA+D SDDQQDITRGKGMVD+LFQ + GT Sbjct: 47 PRTSSGNFKVV-AEVDEEKQTSKDKWKGLAFDESDDQQDITRGKGMVDSLFQAPMDSGTH 105
Query: 194 HAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWG 373 +AVMSSY+YISTG R + +DN DG+YIAPAFMDKLVVHI KNFM LPNIK+PLILGIWG Sbjct: 106 YAVMSSYDYISTGLRQYNLDNTMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWG 165
Query: 374 GKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCC 553 GKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IR KGKMCC Sbjct: 166 GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCC 224
Query: 554 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655 LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIA Sbjct: 225 LFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIA 258
>tr|Q9ATC0|Q9ATC0_ZANAE Rubisco activase (Fragment) OS=Zantedeschia aethiopica GN=rca3 PE=2 SV=1 Length = 426
Score = 352 bits (902), Expect = 1e-95 Identities = 175/205 (85%), Positives = 187/205 (91%) Frame = +2
Query: 41 VVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEY 220 V+ A DESKQTK D+WAGL DTSDDQQDITRGKGMVD+LFQ +G GT + V+SSYEY Sbjct: 7 VMAADLDESKQTKTDRWAGLYTDTSDDQQDITRGKGMVDSLFQAPMGDGTHNPVLSSYEY 66
Query: 221 ISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQ 400 ISTG R+F +DN +G YIAPAFMDKLVVHI KNFMNLPNIKIPLILGIWGGKGQGKSFQ Sbjct: 67 ISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNIKIPLILGIWGGKGQGKSFQ 126
Query: 401 CELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAG 580 CELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IR KGKMCCLFINDLDAG Sbjct: 127 CELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLFINDLDAG 185
Query: 581 AGRMGGTTQYTVNNQMVNATLMNIA 655 AGRMGGTTQYTVNNQMVNATLMNIA Sbjct: 186 AGRMGGTTQYTVNNQMVNATLMNIA 210
>tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 476
Score = 351 bits (901), Expect = 2e-95 Identities = 170/215 (79%), Positives = 188/215 (87%) Frame = +2
Query: 11 TPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGT 190 T + S+ V A DE KQT KD+W GL D SDDQQDITRGKGMVD+LFQ G GT Sbjct: 46 TNSKISSGSFKVVAEYDEKKQTDKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGT 105
Query: 191 QHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIW 370 + ++SSYEY+S G RT+ +DN DGYYIAPAFMDKLVVHI+KNFM+LPNIK+PLILGIW Sbjct: 106 HNPILSSYEYLSQGLRTYNLDNNMDGYYIAPAFMDKLVVHISKNFMSLPNIKVPLILGIW 165
Query: 371 GGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMC 550 GGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KKGKMC Sbjct: 166 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKKGKMC 225
Query: 551 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655 CLFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIA Sbjct: 226 CLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIA 260
>tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 475
Score = 351 bits (901), Expect = 2e-95 Identities = 169/211 (80%), Positives = 188/211 (89%) Frame = +2
Query: 23 SSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAV 202 SS VV DE KQT+KD+W GL D SDDQQDITRGKGMVD+LFQ G GT + V Sbjct: 51 SSGSFKVVAEEYDEEKQTEKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPV 110
Query: 203 MSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKG 382 +SSYEY+S G RT+ +DNM DG+YIAPAFMDK+VVHI+KNFM+LPNIK+PLILGIWGGKG Sbjct: 111 LSSYEYLSQGLRTYNLDNMMDGFYIAPAFMDKIVVHISKNFMSLPNIKVPLILGIWGGKG 170
Query: 383 QGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFI 562 QGKSFQCELVF+K+GI+PIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KKGKMCCLFI Sbjct: 171 QGKSFQCELVFAKMGISPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKKGKMCCLFI 230
Query: 563 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655 NDLDAGAGR+GGTTQYTVNNQMVNATLMNIA Sbjct: 231 NDLDAGAGRLGGTTQYTVNNQMVNATLMNIA 261
>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase activase small protein isoform OS=Acer rubrum PE=2 SV=1 Length = 437
Score = 350 bits (899), Expect = 3e-95 Identities = 174/204 (85%), Positives = 188/204 (92%) Frame = +2
Query: 44 VHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYI 223 V A DE+KQT+KDKW GLAYDTSDDQQDITRGKG+VD+LFQ G GT +AVMSSY+YI Sbjct: 57 VVAEIDENKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYI 116
Query: 224 STGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQC 403 STG RT+ ++N DG+YIAPAFMDKLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQC Sbjct: 117 STGLRTY-LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQC 175
Query: 404 ELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGA 583 ELVF+K+GI PIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGA Sbjct: 176 ELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREAADII-KKGKMCCLFINDLDAGA 234
Query: 584 GRMGGTTQYTVNNQMVNATLMNIA 655 GRMGGTTQYTVNNQMVNATLMNIA Sbjct: 235 GRMGGTTQYTVNNQMVNATLMNIA 258
>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase activase large protein isoform OS=Acer rubrum PE=2 SV=1 Length = 474
Score = 350 bits (899), Expect = 3e-95 Identities = 174/204 (85%), Positives = 188/204 (92%) Frame = +2
Query: 44 VHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYI 223 V A DE+KQT+KDKW GLAYDTSDDQQDITRGKG+VD+LFQ G GT +AVMSSY+YI Sbjct: 57 VVAEIDENKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYI 116
Query: 224 STGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQC 403 STG RT+ ++N DG+YIAPAFMDKLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQC Sbjct: 117 STGLRTY-LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQC 175
Query: 404 ELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGA 583 ELVF+K+GI PIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGA Sbjct: 176 ELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREAADII-KKGKMCCLFINDLDAGA 234
Query: 584 GRMGGTTQYTVNNQMVNATLMNIA 655 GRMGGTTQYTVNNQMVNATLMNIA Sbjct: 235 GRMGGTTQYTVNNQMVNATLMNIA 258
>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001 PE=4 SV=1 Length = 472
Score = 350 bits (898), Expect = 4e-95 Identities = 171/204 (83%), Positives = 186/204 (91%) Frame = +2
Query: 44 VHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYI 223 V A DE++QT+KD+W GLAYD SDDQQDITRGKGMVD+LFQ + GT +AVMSSYEY+ Sbjct: 56 VVAEIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYL 115
Query: 224 STGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQC 403 STG R + +DN DG+YIAPAFMDKLVVHI KNFM LPNIK+PLILGIWGGKGQGKSFQC Sbjct: 116 STGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQC 175
Query: 404 ELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGA 583 ELVFSK+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IR KGKMCCLFINDLDAGA Sbjct: 176 ELVFSKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLFINDLDAGA 234
Query: 584 GRMGGTTQYTVNNQMVNATLMNIA 655 GR+GGTTQYTVNNQMVNATLMNIA Sbjct: 235 GRLGGTTQYTVNNQMVNATLMNIA 258
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