DK950621
Clone id TST38A01NGRL0009_C19
Library
Length 655
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_C19. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CATCTCCATCACACCGGCAACTAGCTCTGCAAAGCCATTGGTGGTGCACGCTTCGGAGGA
TGAGTCGAAGCAGACCAAGAAGGATAAATGGGCAGGACTTGCATACGACACTTCCGATGA
TCAGCAAGACATTACAAGAGGGAAAGGGATGGTGGATGCCCTCTTCCAAGGGGCAGTTGG
CTTGGGTACCCAGCATGCTGTCATGAGTTCCTACGAGTACATCAGCACTGGTCAGAGGAC
TTTCCAGATGGACAACATGAAGGATGGGTACTACATCGCACCGGCTTTCATGGACAAGTT
GGTGGTGCACATTGCCAAGAACTTTATGAACCTTCCCAATATTAAGATTCCTTTGATTCT
TGGTATTTGGGGTGGAAAAGGACAAGGAAAATCTTTCCAGTGTGAACTAGTGTTCTCAAA
GCTTGGAATCAACCCCATCATGATGAGTGCTGGTGAGCTCGAGAGTGGAAATGCTGGTGA
ACCCGCCAAGCTCATTCGACAGAGATACCGTGAAGCTGCGGATGTGATTCGAAAGAAAGG
AAAGATGTGTTGTCTCTTTATCAATGATCTTGACGCTGGAGCTGGTCGCATGGGTGGAAC
AACACAATATACTGTCAACAATCAGATGGTGAATGCAACCCTCATGAACATTGCT
■■Homology search results ■■ -
sp_hit_id P10896
Definition sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana
Align length 198
Score (bit) 347.0
E-value 4.0e-95
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950621|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_C19, 5'
(655 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ... 347 4e-95
sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase... 347 4e-95
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase... 347 4e-95
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ... 346 7e-95
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ... 343 5e-94
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ... 343 6e-94
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ... 339 7e-93
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase... 338 1e-92
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 335 1e-91
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ... 334 3e-91
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ... 333 4e-91
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase... 333 5e-91
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ... 332 8e-91
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 331 2e-90
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ... 317 5e-86
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ... 279 8e-75
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ... 186 1e-46
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ... 185 2e-46
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ... 127 4e-29
sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ... 74 7e-13
sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_... 46 2e-04
sp|O74445|PRS10_SCHPO Probable 26S protease subunit rpt4 OS=Schi... 42 0.002
sp|P62335|PRS10_SPETR 26S protease regulatory subunit S10B OS=Sp... 40 0.014
sp|P62334|PRS10_MOUSE 26S protease regulatory subunit S10B OS=Mu... 40 0.014
sp|P62333|PRS10_HUMAN 26S protease regulatory subunit S10B OS=Ho... 40 0.014
sp|Q2KIW6|PRS10_BOVIN 26S protease regulatory subunit S10B OS=Bo... 40 0.014
sp|Q9HPF0|CDCH_HALSA Protein cdcH OS=Halobacterium salinarium GN... 40 0.014
sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing prote... 39 0.018
sp|A6UQT3|PSMR_METVS Proteasome-activating nucleotidase OS=Metha... 39 0.031
sp|Q6LWR0|PSMR_METMP Proteasome-activating nucleotidase OS=Metha... 38 0.041

>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Arabidopsis thaliana GN=RCA
PE=1 SV=2
Length = 474

Score = 347 bits (889), Expect = 4e-95
Identities = 167/198 (84%), Positives = 181/198 (91%)
Frame = +2

Query: 62 ESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRT 241
E KQT D+W GLAYDTSDDQQDITRGKGMVD++FQ +G GT HAV+SSYEY+S G R
Sbjct: 62 EDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQ 121

Query: 242 FQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSK 421
+ +DNM DG+YIAPAFMDKLVVHI KNF+ LPNIK+PLILGIWGGKGQGKSFQCELV +K
Sbjct: 122 YNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAK 181

Query: 422 LGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGGT 601
+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGAGRMGGT
Sbjct: 182 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADLI-KKGKMCCLFINDLDAGAGRMGGT 240

Query: 602 TQYTVNNQMVNATLMNIA 655
TQYTVNNQMVNATLMNIA
Sbjct: 241 TQYTVNNQMVNATLMNIA 258


>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
PE=2 SV=1
Length = 435

Score = 347 bits (889), Expect = 4e-95
Identities = 172/214 (80%), Positives = 185/214 (86%)
Frame = +2

Query: 14 PATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQ 193
P SS +V E +QT KDKW GLAYD SDDQQDITRGKGMVD LFQ + GT
Sbjct: 46 PKASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTH 105

Query: 194 HAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWG 373
+AVMSSY+YIS G R + +DN DG+YIAPAFMDKLVVHI KNF++LPNIKIPLILGIWG
Sbjct: 106 YAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWG 165

Query: 374 GKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCC 553
GKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCC
Sbjct: 166 GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII-KKGKMCC 224

Query: 554 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655
LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA
Sbjct: 225 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 258


>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
PE=2 SV=1
Length = 476

Score = 347 bits (889), Expect = 4e-95
Identities = 172/214 (80%), Positives = 185/214 (86%)
Frame = +2

Query: 14 PATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQ 193
P SS +V E +QT KDKW GLAYD SDDQQDITRGKGMVD LFQ + GT
Sbjct: 46 PKASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTH 105

Query: 194 HAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWG 373
+AVMSSY+YIS G R + +DN DG+YIAPAFMDKLVVHI KNF++LPNIKIPLILGIWG
Sbjct: 106 YAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWG 165

Query: 374 GKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCC 553
GKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCC
Sbjct: 166 GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII-KKGKMCC 224

Query: 554 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655
LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA
Sbjct: 225 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 258


>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Cucumis sativus PE=2 SV=1
Length = 413

Score = 346 bits (887), Expect = 7e-95
Identities = 166/202 (82%), Positives = 182/202 (90%)
Frame = +2

Query: 50 ASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYIST 229
A +DE KQT+KDKW GLA+DTSDDQQDITRGKG+ D LFQ +G GT +AV+SSYEYIS
Sbjct: 55 AEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISA 114

Query: 230 GQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCEL 409
G R + DN DG+YIAPAFMDKL VHI KNF+ LPNIK+PLILG+WGGKGQGKSFQCEL
Sbjct: 115 GLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCEL 174

Query: 410 VFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGR 589
VF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGAGR
Sbjct: 175 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII-KKGKMCCLFINDLDAGAGR 233

Query: 590 MGGTTQYTVNNQMVNATLMNIA 655
+GGTTQYTVNNQMVNATLMNIA
Sbjct: 234 LGGTTQYTVNNQMVNATLMNIA 255


>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Oryza sativa subsp. japonica
GN=RCA PE=1 SV=2
Length = 466

Score = 343 bits (880), Expect = 5e-94
Identities = 167/199 (83%), Positives = 179/199 (89%)
Frame = +2

Query: 59 DESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQR 238
DE KQT +D+W GLAYD SDDQQDITRGKG VD+LFQ G GT AV+SSYEY+S G R
Sbjct: 52 DEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLR 111

Query: 239 TFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFS 418
T+ DN G+YIAPAFMDKLVVHI+KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+
Sbjct: 112 TYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFA 171

Query: 419 KLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGG 598
K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGAGRMGG
Sbjct: 172 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII-KKGKMCCLFINDLDAGAGRMGG 230

Query: 599 TTQYTVNNQMVNATLMNIA 655
TTQYTVNNQMVNATLMNIA
Sbjct: 231 TTQYTVNNQMVNATLMNIA 249


>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Malus domestica GN=RCA PE=2
SV=1
Length = 437

Score = 343 bits (879), Expect = 6e-94
Identities = 171/215 (79%), Positives = 186/215 (86%)
Frame = +2

Query: 11 TPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGT 190
T + S+ L + AS DE KQT KD+W GLA+DTSDDQQDITRGKG VD+LFQ G GT
Sbjct: 45 TNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGT 104

Query: 191 QHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIW 370
A+MSSYEYISTG R + DN DGYYIAPAFMDKLVVHI KNFM LPN+K+PLILGIW
Sbjct: 105 HFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIW 164

Query: 371 GGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMC 550
GGKGQGKSFQCELVF+K+ I+PIMMSAGELESGNAGEPAKLIRQRYREAAD+IR KGKMC
Sbjct: 165 GGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMC 223

Query: 551 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655
LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIA
Sbjct: 224 ALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIA 258


>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
SV=2
Length = 439

Score = 339 bits (870), Expect = 7e-93
Identities = 169/210 (80%), Positives = 185/210 (88%)
Frame = +2

Query: 26 SAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVM 205
S K + +ES+QT KD+W GLAYD SDDQQDITRGKGMVD LFQ + GT +AVM
Sbjct: 54 SFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVM 113

Query: 206 SSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQ 385
SSYEY+STG R Q+DN+KDG+YIAPAF+DKLVVHI KNFM LPNIK+PLILGIWGGKGQ
Sbjct: 114 SSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQ 171

Query: 386 GKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFIN 565
GKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC LFIN
Sbjct: 172 GKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLI-AKGKMCALFIN 230

Query: 566 DLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655
DLDAGAGR+GGTTQYTVNNQMVNATLMNIA
Sbjct: 231 DLDAGAGRLGGTTQYTVNNQMVNATLMNIA 260


>sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase
activase A, chloroplastic OS=Hordeum vulgare GN=RCAA
PE=2 SV=1
Length = 464

Score = 338 bits (868), Expect = 1e-92
Identities = 167/212 (78%), Positives = 183/212 (86%)
Frame = +2

Query: 20 TSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHA 199
+S A V A+E+ ++ DKW GLAYD SDDQQDITRGKG+VD+LFQ G GT A
Sbjct: 38 SSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEA 97

Query: 200 VMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGK 379
V+SSYEY+S G R + DN G+YIAPAFMDKLVVH++KNFM LPNIKIPLILGIWGGK
Sbjct: 98 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGK 157

Query: 380 GQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLF 559
GQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLF
Sbjct: 158 GQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI-KKGKMCCLF 216

Query: 560 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655
INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA
Sbjct: 217 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 248


>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
Length = 442

Score = 335 bits (860), Expect = 1e-91
Identities = 162/199 (81%), Positives = 174/199 (87%)
Frame = +2

Query: 59 DESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQR 238
D KQT D+W GL D SDDQQDITRGKGMVD+LFQ G GT HAV+ SYEY+S G R
Sbjct: 65 DPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLR 124

Query: 239 TFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFS 418
+ +DN DG+YIAPAFMDKLVVHI KNF+ LPNIK+PLILGIWGGKGQGKSFQCELVF
Sbjct: 125 QYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFR 184

Query: 419 KLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGAGRMGG 598
K+GINPIMMSAGELESGNAGEPAKLIRQRYREAA++IR KG MCCLFINDLDAGAGRMGG
Sbjct: 185 KMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIR-KGNMCCLFINDLDAGAGRMGG 243

Query: 599 TTQYTVNNQMVNATLMNIA 655
TTQYTVNNQMVNATLMNIA
Sbjct: 244 TTQYTVNNQMVNATLMNIA 262


>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1
PE=2 SV=1
Length = 441

Score = 334 bits (856), Expect = 3e-91
Identities = 161/212 (75%), Positives = 187/212 (88%)
Frame = +2

Query: 20 TSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHA 199
+ S K + +E++QT+ D+W GLAYD SDDQQDITRGKG+VD+LFQ + GT +A
Sbjct: 52 SGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYA 111

Query: 200 VMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGK 379
V+SS++Y+S G R + DN+KDG+YIAPAF+DKLVVHIAKNFM LPNIK+PLILG+WGGK
Sbjct: 112 VISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGK 171

Query: 380 GQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLF 559
GQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREA+D+I KKGKMC LF
Sbjct: 172 GQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDLI-KKGKMCVLF 230

Query: 560 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655
INDLDAGAGR+GGTTQYTVNNQMVNATLMNIA
Sbjct: 231 INDLDAGAGRLGGTTQYTVNNQMVNATLMNIA 262


tr_hit_id Q9ATC2
Definition tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedeschia aethiopica
Align length 212
Score (bit) 353.0
E-value 5.0e-96
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK950621|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0009_C19, 5'
(655 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 353 5e-96
tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 353 5e-96
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul... 353 7e-96
tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome... 353 7e-96
tr|Q9ATC0|Q9ATC0_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 352 1e-95
tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul... 351 2e-95
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul... 351 2e-95
tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car... 350 3e-95
tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car... 350 3e-95
tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ... 350 4e-95
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis... 350 4e-95
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom... 350 6e-95
tr|A9TLG8|A9TLG8_PHYPA Predicted protein OS=Physcomitrella paten... 349 1e-94
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten... 348 1e-94
tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t... 348 1e-94
tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten... 348 2e-94
tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 347 5e-94
tr|Q3EBJ5|Q3EBJ5_ARATH Uncharacterized protein At2g39730.3 OS=Ar... 347 5e-94
tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul... 347 5e-94
tr|Q9AXG0|Q9AXG0_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 346 6e-94
tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car... 346 6e-94
tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car... 346 6e-94
tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 346 8e-94
tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 344 2e-93
tr|Q308Y6|Q308Y6_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 343 4e-93
tr|A9UHW7|A9UHW7_IPOBA Rubisco activase OS=Ipomoea batatas GN=rc... 343 4e-93
tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza... 343 5e-93
tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen... 343 5e-93
tr|Q9M4V3|Q9M4V3_WHEAT Ribulose bisphosphate carboxylase activas... 342 9e-93
tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car... 342 9e-93

>tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedeschia
aethiopica GN=rca1 PE=2 SV=1
Length = 436

Score = 353 bits (906), Expect = 5e-96
Identities = 177/212 (83%), Positives = 190/212 (89%)
Frame = +2

Query: 20 TSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHA 199
TS+ V+ A DESKQTK D+WAGL DTSDDQQDITRGKGMVD+LFQ +G GT +
Sbjct: 10 TSTGTLKVMAADLDESKQTKTDRWAGLYTDTSDDQQDITRGKGMVDSLFQAPMGDGTHNP 69

Query: 200 VMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGK 379
V+SSYEYISTG R+F +DN +G YIAPAFMDKLVVHI KNFMNLPNIKIPLILGIWGGK
Sbjct: 70 VLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNIKIPLILGIWGGK 129

Query: 380 GQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLF 559
GQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IR KGKMCCLF
Sbjct: 130 GQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLF 188

Query: 560 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655
INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA
Sbjct: 189 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 220


>tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedeschia
aethiopica GN=rca4 PE=2 SV=1
Length = 435

Score = 353 bits (906), Expect = 5e-96
Identities = 177/212 (83%), Positives = 190/212 (89%)
Frame = +2

Query: 20 TSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHA 199
TS+ V+ A DESKQTK D+WAGL DTSDDQQDITRGKGMVD+LFQ +G GT +
Sbjct: 46 TSTGTLKVMAADLDESKQTKTDRWAGLYTDTSDDQQDITRGKGMVDSLFQAPMGDGTHNP 105

Query: 200 VMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGK 379
V+SSYEYISTG R+F +DN +G YIAPAFMDKLVVHI KNFMNLPNIKIPLILGIWGGK
Sbjct: 106 VLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNIKIPLILGIWGGK 165

Query: 380 GQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLF 559
GQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IR KGKMCCLF
Sbjct: 166 GQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLF 224

Query: 560 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655
INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA
Sbjct: 225 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 256


>tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 461

Score = 353 bits (905), Expect = 7e-96
Identities = 170/211 (80%), Positives = 188/211 (89%)
Frame = +2

Query: 23 SSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAV 202
SS VV DE KQT+KD+W GL D SDDQQDITRGKGMVD+LFQ G GT + V
Sbjct: 51 SSGSFKVVAEEYDEEKQTEKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPV 110

Query: 203 MSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKG 382
+SSYEY+S G RT+ +DNM DGYYIAPAFMDK+VVHI+KNFM+LPNIK+PLILGIWGGKG
Sbjct: 111 LSSYEYLSQGLRTYNLDNMMDGYYIAPAFMDKIVVHISKNFMSLPNIKVPLILGIWGGKG 170

Query: 383 QGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFI 562
QGKSFQCELVF+K+GI+PIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KKGKMCCLFI
Sbjct: 171 QGKSFQCELVFAKMGISPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKKGKMCCLFI 230

Query: 563 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655
NDLDAGAGR+GGTTQYTVNNQMVNATLMNIA
Sbjct: 231 NDLDAGAGRLGGTTQYTVNNQMVNATLMNIA 261


>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001
PE=4 SV=1
Length = 474

Score = 353 bits (905), Expect = 7e-96
Identities = 176/214 (82%), Positives = 189/214 (88%)
Frame = +2

Query: 14 PATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQ 193
P TSS VV A DE KQT KDKW GLA+D SDDQQDITRGKGMVD+LFQ + GT
Sbjct: 47 PRTSSGNFKVV-AEVDEEKQTSKDKWKGLAFDESDDQQDITRGKGMVDSLFQAPMDSGTH 105

Query: 194 HAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWG 373
+AVMSSY+YISTG R + +DN DG+YIAPAFMDKLVVHI KNFM LPNIK+PLILGIWG
Sbjct: 106 YAVMSSYDYISTGLRQYNLDNTMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWG 165

Query: 374 GKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCC 553
GKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IR KGKMCC
Sbjct: 166 GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCC 224

Query: 554 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655
LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIA
Sbjct: 225 LFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIA 258


>tr|Q9ATC0|Q9ATC0_ZANAE Rubisco activase (Fragment) OS=Zantedeschia
aethiopica GN=rca3 PE=2 SV=1
Length = 426

Score = 352 bits (902), Expect = 1e-95
Identities = 175/205 (85%), Positives = 187/205 (91%)
Frame = +2

Query: 41 VVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEY 220
V+ A DESKQTK D+WAGL DTSDDQQDITRGKGMVD+LFQ +G GT + V+SSYEY
Sbjct: 7 VMAADLDESKQTKTDRWAGLYTDTSDDQQDITRGKGMVDSLFQAPMGDGTHNPVLSSYEY 66

Query: 221 ISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQ 400
ISTG R+F +DN +G YIAPAFMDKLVVHI KNFMNLPNIKIPLILGIWGGKGQGKSFQ
Sbjct: 67 ISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNIKIPLILGIWGGKGQGKSFQ 126

Query: 401 CELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAG 580
CELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IR KGKMCCLFINDLDAG
Sbjct: 127 CELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLFINDLDAG 185

Query: 581 AGRMGGTTQYTVNNQMVNATLMNIA 655
AGRMGGTTQYTVNNQMVNATLMNIA
Sbjct: 186 AGRMGGTTQYTVNNQMVNATLMNIA 210


>tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 476

Score = 351 bits (901), Expect = 2e-95
Identities = 170/215 (79%), Positives = 188/215 (87%)
Frame = +2

Query: 11 TPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGT 190
T + S+ V A DE KQT KD+W GL D SDDQQDITRGKGMVD+LFQ G GT
Sbjct: 46 TNSKISSGSFKVVAEYDEKKQTDKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGT 105

Query: 191 QHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIW 370
+ ++SSYEY+S G RT+ +DN DGYYIAPAFMDKLVVHI+KNFM+LPNIK+PLILGIW
Sbjct: 106 HNPILSSYEYLSQGLRTYNLDNNMDGYYIAPAFMDKLVVHISKNFMSLPNIKVPLILGIW 165

Query: 371 GGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMC 550
GGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KKGKMC
Sbjct: 166 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKKGKMC 225

Query: 551 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655
CLFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIA
Sbjct: 226 CLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIA 260


>tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 475

Score = 351 bits (901), Expect = 2e-95
Identities = 169/211 (80%), Positives = 188/211 (89%)
Frame = +2

Query: 23 SSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAV 202
SS VV DE KQT+KD+W GL D SDDQQDITRGKGMVD+LFQ G GT + V
Sbjct: 51 SSGSFKVVAEEYDEEKQTEKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPV 110

Query: 203 MSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKG 382
+SSYEY+S G RT+ +DNM DG+YIAPAFMDK+VVHI+KNFM+LPNIK+PLILGIWGGKG
Sbjct: 111 LSSYEYLSQGLRTYNLDNMMDGFYIAPAFMDKIVVHISKNFMSLPNIKVPLILGIWGGKG 170

Query: 383 QGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFI 562
QGKSFQCELVF+K+GI+PIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KKGKMCCLFI
Sbjct: 171 QGKSFQCELVFAKMGISPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKKGKMCCLFI 230

Query: 563 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIA 655
NDLDAGAGR+GGTTQYTVNNQMVNATLMNIA
Sbjct: 231 NDLDAGAGRLGGTTQYTVNNQMVNATLMNIA 261


>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase activase small protein isoform
OS=Acer rubrum PE=2 SV=1
Length = 437

Score = 350 bits (899), Expect = 3e-95
Identities = 174/204 (85%), Positives = 188/204 (92%)
Frame = +2

Query: 44 VHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYI 223
V A DE+KQT+KDKW GLAYDTSDDQQDITRGKG+VD+LFQ G GT +AVMSSY+YI
Sbjct: 57 VVAEIDENKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYI 116

Query: 224 STGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQC 403
STG RT+ ++N DG+YIAPAFMDKLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQC
Sbjct: 117 STGLRTY-LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQC 175

Query: 404 ELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGA 583
ELVF+K+GI PIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGA
Sbjct: 176 ELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREAADII-KKGKMCCLFINDLDAGA 234

Query: 584 GRMGGTTQYTVNNQMVNATLMNIA 655
GRMGGTTQYTVNNQMVNATLMNIA
Sbjct: 235 GRMGGTTQYTVNNQMVNATLMNIA 258


>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase activase large protein isoform
OS=Acer rubrum PE=2 SV=1
Length = 474

Score = 350 bits (899), Expect = 3e-95
Identities = 174/204 (85%), Positives = 188/204 (92%)
Frame = +2

Query: 44 VHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYI 223
V A DE+KQT+KDKW GLAYDTSDDQQDITRGKG+VD+LFQ G GT +AVMSSY+YI
Sbjct: 57 VVAEIDENKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYI 116

Query: 224 STGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQC 403
STG RT+ ++N DG+YIAPAFMDKLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQC
Sbjct: 117 STGLRTY-LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQC 175

Query: 404 ELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGA 583
ELVF+K+GI PIMMSAGELESGNAGEPAKLIRQRYREAAD+I KKGKMCCLFINDLDAGA
Sbjct: 176 ELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREAADII-KKGKMCCLFINDLDAGA 234

Query: 584 GRMGGTTQYTVNNQMVNATLMNIA 655
GRMGGTTQYTVNNQMVNATLMNIA
Sbjct: 235 GRMGGTTQYTVNNQMVNATLMNIA 258


>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001
PE=4 SV=1
Length = 472

Score = 350 bits (898), Expect = 4e-95
Identities = 171/204 (83%), Positives = 186/204 (91%)
Frame = +2

Query: 44 VHASEDESKQTKKDKWAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYI 223
V A DE++QT+KD+W GLAYD SDDQQDITRGKGMVD+LFQ + GT +AVMSSYEY+
Sbjct: 56 VVAEIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYL 115

Query: 224 STGQRTFQMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQC 403
STG R + +DN DG+YIAPAFMDKLVVHI KNFM LPNIK+PLILGIWGGKGQGKSFQC
Sbjct: 116 STGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQC 175

Query: 404 ELVFSKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADVIRKKGKMCCLFINDLDAGA 583
ELVFSK+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IR KGKMCCLFINDLDAGA
Sbjct: 176 ELVFSKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIR-KGKMCCLFINDLDAGA 234

Query: 584 GRMGGTTQYTVNNQMVNATLMNIA 655
GR+GGTTQYTVNNQMVNATLMNIA
Sbjct: 235 GRLGGTTQYTVNNQMVNATLMNIA 258