DK950638 |
Clone id |
TST38A01NGRL0009_D13 |
Library |
TST38 |
Length |
679 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_D13. 5' end sequence. |
Accession |
DK950638 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL439Contig1 |
Sequence |
CACATTCCAAGGGGACGATATAGCAGAGCTCGGTTTCATTATCCGAGCACATGGCGGCCG CCTCTTGTTCTCGCTGCGCGATGCAAGCAGCCTCTTCCTACGTGGCAGCAGTAGCAACAT CGCCATCAGTATCTTCGGCATCATCATCCCTTCCTGTAGCCCGCTCAGCAGCGAATGTGA TCCCTGGGTCGCAGAAATCTCGCCTTCATGCAACTTTTCTTCAAAGATCTCCTGTGCCTG CTCGTCCTCATGTATTGAAAAGCCCTTGCTGTGCTGTCTCAGTTGGGATCTCCTCCGAGC CAGAGACCGCAGTTGAAGGGGTCAACATAGCTGAGGATGTTACCCAGCTTATAGGGAAAA CTCCCATGGTTTACCTGACCAACGTGACAGATGGATGTGGTGGCTATATAGAAGCTAAAC TGGAGTCCATGGAACCTTGCTCTAGTGTTAAAGACAGGATTGGGAGAAGTATGATTGAAG ATGCCGAATCAAAAGGGCTTATTGTCCCCGGAAAGAGTGTTTTAGTTGAGCCTACTAGTG GAAACACGGGTATTGGTTTAGCTTTTATAGCTGCGTCTAAAGGCTATAAGCTAATCCTTA CAATGCCTGCATCAATGAGTCTGGAACGGCGTGTGCTACTGAAGGCGTTTGGTGCTGAGC TGGTACTGACCGACCCTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P31300 |
Definition |
sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum |
Align length |
137 |
Score (bit) |
202.0 |
E-value |
1.0e-51 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950638|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_D13, 5' (679 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromopla... 202 1e-51 sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromopla... 202 1e-51 sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromopla... 201 3e-51 sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromopla... 199 9e-51 sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. j... 196 1e-49 sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=C... 194 4e-49 sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabid... 194 4e-49 sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. j... 192 2e-48 sp|P80608|CYSK_MAIZE Cysteine synthase OS=Zea mays PE=1 SV=2 190 5e-48 sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1... 187 6e-47 sp|O81154|CYSK_SOLTU Cysteine synthase OS=Solanum tuberosum PE=2... 186 1e-46 sp|Q43317|CYSK_CITLA Cysteine synthase OS=Citrullus lanatus PE=2... 184 3e-46 sp|O23733|CYSK1_BRAJU Cysteine synthase OS=Brassica juncea PE=2 ... 184 4e-46 sp|O23735|CYSK2_BRAJU Cysteine synthase OS=Brassica juncea PE=2 ... 183 6e-46 sp|P47998|CYSK1_ARATH Cysteine synthase OS=Arabidopsis thaliana ... 183 6e-46 sp|O22682|CYSK4_ARATH Probable cysteine synthase, chloroplastic ... 180 7e-45 sp|P73410|CYSK_SYNY3 Cysteine synthase OS=Synechocystis sp. (str... 143 7e-34 sp|P0A534|CYSK_MYCTU Cysteine synthase A OS=Mycobacterium tuberc... 139 1e-32 sp|P0A535|CYSK_MYCBO Cysteine synthase A OS=Mycobacterium bovis ... 139 1e-32 sp|O32978|CYSK_MYCLE Cysteine synthase A OS=Mycobacterium leprae... 138 2e-32 sp|Q8CMT6|CYSK_STAES Cysteine synthase OS=Staphylococcus epiderm... 129 2e-29 sp|Q5HRP1|CYSK_STAEQ Cysteine synthase OS=Staphylococcus epiderm... 129 2e-29 sp|P63872|CYSK_STAAW Cysteine synthase OS=Staphylococcus aureus ... 128 2e-29 sp|Q6GBX5|CYSK_STAAS Cysteine synthase OS=Staphylococcus aureus ... 128 2e-29 sp|Q6GJF8|CYSK_STAAR Cysteine synthase OS=Staphylococcus aureus ... 128 2e-29 sp|P63871|CYSK_STAAN Cysteine synthase OS=Staphylococcus aureus ... 128 2e-29 sp|P63870|CYSK_STAAM Cysteine synthase OS=Staphylococcus aureus ... 128 2e-29 sp|Q5HIG2|CYSK_STAAC Cysteine synthase OS=Staphylococcus aureus ... 128 2e-29 sp|P37887|CYSK_BACSU Serine-dependent cysteine synthase OS=Bacil... 126 1e-28 sp|Q5XAQ3|CYSK_STRP6 Cysteine synthase OS=Streptococcus pyogenes... 125 2e-28
>sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1 Length = 374
Score = 202 bits (515), Expect = 1e-51 Identities = 108/137 (78%), Positives = 114/137 (83%) Frame = +3
Query: 267 CCAVSVGISSEPETAVEGVNIAEDVTQLIGKTPMVYLTNVTDGCGGYIEAKLESMEPCSS 446 C AVSV S E +EG+NIAEDVTQLIG TPMVYL + GC I AKLE MEPC S Sbjct: 49 CKAVSVQTKSPTE--IEGLNIAEDVTQLIGNTPMVYLNTIVKGCVANIAAKLEIMEPCCS 106
Query: 447 VKDRIGRSMIEDAESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLE 626 VKDRIG SMI DAE KGLI PGK+VLVEPTSGNTGIGLAFIAAS+GYKLILTMPASMSLE Sbjct: 107 VKDRIGFSMISDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLE 166
Query: 627 RRVLLKAFGAELVLTDP 677 RRV+LKAFGAELVLTDP Sbjct: 167 RRVILKAFGAELVLTDP 183
>sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1 Length = 386
Score = 202 bits (514), Expect = 1e-51 Identities = 108/137 (78%), Positives = 114/137 (83%) Frame = +3
Query: 267 CCAVSVGISSEPETAVEGVNIAEDVTQLIGKTPMVYLTNVTDGCGGYIEAKLESMEPCSS 446 C AVSV S E +EG+NIAEDVTQLIG TPMVYL + GC I AKLE MEPC S Sbjct: 51 CKAVSVPTKSSTE--IEGLNIAEDVTQLIGNTPMVYLNTIAKGCVANIAAKLEIMEPCCS 108
Query: 447 VKDRIGRSMIEDAESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLE 626 VKDRIG SMI DAE KGLI PGK+VLVEPTSGNTGIGLAFIAAS+GYKLILTMPASMSLE Sbjct: 109 VKDRIGFSMIVDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLE 168
Query: 627 RRVLLKAFGAELVLTDP 677 RRV+LKAFGAELVLTDP Sbjct: 169 RRVILKAFGAELVLTDP 185
>sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2 Length = 392
Score = 201 bits (511), Expect = 3e-51 Identities = 104/134 (77%), Positives = 112/134 (83%) Frame = +3
Query: 276 VSVGISSEPETAVEGVNIAEDVTQLIGKTPMVYLTNVTDGCGGYIEAKLESMEPCSSVKD 455 V +S +PE VEG+NIA++ QLIGKTPMVYL NV GC + AKLE MEPC SVKD Sbjct: 58 VCKAVSIKPEAGVEGLNIADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKD 117
Query: 456 RIGRSMIEDAESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRV 635 RIG SMI DAE KGLI PGKSVLVE TSGNTGIGLAFIAASKGYKLILTMPASMSLERRV Sbjct: 118 RIGYSMITDAEEKGLITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRV 177
Query: 636 LLKAFGAELVLTDP 677 LL+AFGAELVLT+P Sbjct: 178 LLRAFGAELVLTEP 191
>sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2 Length = 383
Score = 199 bits (507), Expect = 9e-51 Identities = 103/142 (72%), Positives = 118/142 (83%) Frame = +3
Query: 252 VLKSPCCAVSVGISSEPETAVEGVNIAEDVTQLIGKTPMVYLTNVTDGCGGYIEAKLESM 431 V SP +V +S P + +EG+NIAEDV+QLIGKTPMVYL NV+ G I AKLESM Sbjct: 44 VSSSPITCKAVSLS--PPSTIEGLNIAEDVSQLIGKTPMVYLNNVSKGSVANIAAKLESM 101
Query: 432 EPCSSVKDRIGRSMIEDAESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPA 611 EPC SVKDRIG SMI+DAE KG+I PGK+ LVEPTSGNTGIGLAFIAA++GYK+ LTMPA Sbjct: 102 EPCCSVKDRIGYSMIDDAEQKGVITPGKTTLVEPTSGNTGIGLAFIAAARGYKITLTMPA 161
Query: 612 SMSLERRVLLKAFGAELVLTDP 677 SMS+ERRV+LKAFGAELVLTDP Sbjct: 162 SMSMERRVILKAFGAELVLTDP 183
>sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2 Length = 321
Score = 196 bits (497), Expect = 1e-49 Identities = 95/120 (79%), Positives = 108/120 (90%) Frame = +3
Query: 318 GVNIAEDVTQLIGKTPMVYLTNVTDGCGGYIEAKLESMEPCSSVKDRIGRSMIEDAESKG 497 G IA+DVT+LIG TP+VYL VTDGC G + AKLESMEPCSSVKDRIG SMI DAE KG Sbjct: 2 GETIAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKG 61
Query: 498 LIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDP 677 LI PGKSVL+EPTSGNTGIGLAF+AA+KGY+L+LTMPASMS+ERR++LKAFGAEL+LTDP Sbjct: 62 LITPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDP 121
>sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1 Length = 325
Score = 194 bits (493), Expect = 4e-49 Identities = 94/117 (80%), Positives = 107/117 (91%) Frame = +3
Query: 327 IAEDVTQLIGKTPMVYLTNVTDGCGGYIEAKLESMEPCSSVKDRIGRSMIEDAESKGLIV 506 IA+DVT+LIG TP+VYL VTDGC G + AKLESMEPCSSVKDRIG SMI DAE KG IV Sbjct: 9 IAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGFIV 68
Query: 507 PGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDP 677 PGKSVL+EPTSGNTGIGLAF+AA+KGY+L+LTMPASMS+ERR++LKAFGAEL+LTDP Sbjct: 69 PGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDP 125
>sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3 Length = 430
Score = 194 bits (493), Expect = 4e-49 Identities = 98/125 (78%), Positives = 109/125 (87%) Frame = +3
Query: 303 ETAVEGVNIAEDVTQLIGKTPMVYLTNVTDGCGGYIEAKLESMEPCSSVKDRIGRSMIED 482 ET +G+NIA++V+QLIGKTPMVYL ++ GC I AKLE MEPC SVKDRIG SM+ D Sbjct: 105 ETGPDGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTD 164
Query: 483 AESKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAEL 662 AE KG I PGKSVLVEPTSGNTGIGLAFIAAS+GY+LILTMPASMS+ERRVLLKAFGAEL Sbjct: 165 AEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAEL 224
Query: 663 VLTDP 677 VLTDP Sbjct: 225 VLTDP 229
>sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1 Length = 325
Score = 192 bits (487), Expect = 2e-48 Identities = 97/123 (78%), Positives = 105/123 (85%) Frame = +3
Query: 309 AVEGVNIAEDVTQLIGKTPMVYLTNVTDGCGGYIEAKLESMEPCSSVKDRIGRSMIEDAE 488 A G +IA DVT LIG TP+VYL V DGC I AKLE MEPCSSVKDRIG SMI DAE Sbjct: 2 AESGQSIASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAE 61
Query: 489 SKGLIVPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVL 668 KGLI PGKSVL+EPTSGNTGIGLAF+AA+KGYKLILTMPASMS+ERR++LKAFGAELVL Sbjct: 62 EKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFGAELVL 121
Query: 669 TDP 677 TDP Sbjct: 122 TDP 124
>sp|P80608|CYSK_MAIZE Cysteine synthase OS=Zea mays PE=1 SV=2 Length = 325
Score = 190 bits (483), Expect = 5e-48 Identities = 95/118 (80%), Positives = 105/118 (88%) Frame = +3
Query: 324 NIAEDVTQLIGKTPMVYLTNVTDGCGGYIEAKLESMEPCSSVKDRIGRSMIEDAESKGLI 503 +IA+DVT+LIG TP+VYL VTDGC G AKLESMEPCSSVKDRIG SMI DAE KGLI Sbjct: 7 SIAKDVTELIGNTPLVYLNKVTDGCVGRSRAKLESMEPCSSVKDRIGYSMITDAEEKGLI 66
Query: 504 VPGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDP 677 PG SVL+EPTSGNTGIGLAF+AA+KGYKL LTMPASMS+ERR++LKAFGAELVLTDP Sbjct: 67 TPGVSVLIEPTSGNTGIGLAFMAAAKGYKLTLTMPASMSMERRIILKAFGAELVLTDP 124
>sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1 SV=1 Length = 325
Score = 187 bits (474), Expect = 6e-47 Identities = 92/117 (78%), Positives = 103/117 (88%) Frame = +3
Query: 327 IAEDVTQLIGKTPMVYLTNVTDGCGGYIEAKLESMEPCSSVKDRIGRSMIEDAESKGLIV 506 IA+DVT+LIGKTP+VYL V DGC + AKLE MEPCSSVKDRIG SMI DAE GLI Sbjct: 8 IAKDVTELIGKTPLVYLNTVADGCVARVAAKLEGMEPCSSVKDRIGFSMITDAEKSGLIT 67
Query: 507 PGKSVLVEPTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLKAFGAELVLTDP 677 PG+SVL+EPTSGNTGIGLAFIAA+KGYKLI+TMPASMSLERR +L+AFGAEL+LTDP Sbjct: 68 PGESVLIEPTSGNTGIGLAFIAAAKGYKLIITMPASMSLERRTILRAFGAELILTDP 124
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q3L197 |
Definition |
tr|Q3L197|Q3L197_ALLSA Cysteine synthase OS=Allium sativum |
Align length |
156 |
Score (bit) |
209.0 |
E-value |
1.0e-52 |
Report |
|