DK950647 |
Clone id |
TST38A01NGRL0009_D22 |
Library |
TST38 |
Length |
694 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0009_D22. 5' end sequence. |
Accession |
DK950647 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL287Contig1 |
Sequence |
GATTCTCGAAGGACCTCTAGCGGATATCTACTATTCTTCAACCTGGCTAGATCACGTTCA CACACAGCCACACACACACACAGCTTTACGGGTAGGCTTTGTGGTCTCACATTCGCAGAA CAGCTAAAATGCCGGGCCCCGGAACAGCTTCTGTGGAAAATTCTGCCCTTCTCAATGAGG TAGACGAGATGTTTGATGAGCTGAAGAAGAAGAAGAAAAAAGAGAAGAAGAACCCCACAG TCCTGTATGGCGGAGAAGCTATGGAGTCACTCGAACCTAGTAGCCCACCTAGTCAAAAGA AGACAAAGAAGAAAAGCAAGGAGAAGGTGCTCTTTGAGGATCCTTCACCAGCGTTAGATA AGAGCGCGTCTAAGTCAAAAAAGAGCAAGAAAAGGAAGCCAGATGAGCCTCTTGATTCAG AGCCGGAATTGAAGGTTTCGAAAGTTGAACAGAGTGAGAGTGAAGAATCAAGTGAGGTTA TCAATCCATATGCAGTAAGTAATTTTAGAATATCAGAAGCCCTGAGGAGAAAGCTGAAGA CAAAAGGAATAGAGGCTCTGTTCCCCATTCAAGCTCTTACATTCAATGCTATTTTCAAAG GAAATGATTTGGTGGGCCGTGCTCGAACTGGCCAGGGCAAGACTCTTGCATTTGTCCTTC CCATTCTGGAATCTTTAAGCTTGGATGTGAACTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q650T9 |
Definition |
sp|Q650T9|RH7_ORYSJ DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica |
Align length |
65 |
Score (bit) |
101.0 |
E-value |
3.0e-21 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QGV9 |
Definition |
tr|A7QGV9|A7QGV9_VITVI Chromosome chr16 scaffold_94, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
65 |
Score (bit) |
107.0 |
E-value |
7.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK950647|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0009_D22, 5' (694 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QGV9|A7QGV9_VITVI Chromosome chr16 scaffold_94, whole genom... 107 7e-22 tr|A9SDC8|A9SDC8_PHYPA Predicted protein OS=Physcomitrella paten... 106 1e-21 tr|A3C0Q9|A3C0Q9_ORYSJ Putative uncharacterized protein OS=Oryza... 101 4e-20 tr|A6MCY9|A6MCY9_9ORYZ DEAD/DEAH box helicase family protein OS=... 100 7e-20 tr|A2Z376|A2Z376_ORYSI Putative uncharacterized protein OS=Oryza... 100 7e-20 tr|Q9M6R6|Q9M6R6_PHAAU RNA helicase OS=Phaseolus aureus GN=VRH1 ... 99 3e-19 tr|B4FF50|B4FF50_MAIZE Putative uncharacterized protein OS=Zea m... 98 6e-19 tr|A4RW46|A4RW46_OSTLU Predicted protein OS=Ostreococcus lucimar... 76 2e-12 tr|B5RIC3|B5RIC3_SALSA DEAD (Asp-Glu-Ala-Asp) box polypeptide 21... 73 1e-11 tr|B3RVR9|B3RVR9_TRIAD Putative uncharacterized protein OS=Trich... 72 4e-11 tr|Q9CWZ5|Q9CWZ5_MOUSE Putative uncharacterized protein OS=Mus m... 70 1e-10 tr|Q8K2L4|Q8K2L4_MOUSE Ddx21 protein (Fragment) OS=Mus musculus ... 70 1e-10 tr|Q6PCP0|Q6PCP0_MOUSE DEAD (Asp-Glu-Ala-Asp) box polypeptide 21... 70 1e-10 tr|Q3ULC7|Q3ULC7_MOUSE Putative uncharacterized protein OS=Mus m... 70 1e-10 tr|Q3TVJ3|Q3TVJ3_MOUSE DEAD (Asp-Glu-Ala-Asp) box polypeptide 21... 70 1e-10 tr|B1H1J4|B1H1J4_DANRE Ddx21 protein OS=Danio rerio GN=ddx21 PE=... 70 2e-10 tr|A4FV23|A4FV23_BOVIN DDX21 protein OS=Bos taurus GN=DDX21 PE=2... 70 2e-10 tr|Q57Z07|Q57Z07_9TRYP Nucleolar RNA helicase II, putative OS=Tr... 69 2e-10 tr|B2RDL0|B2RDL0_HUMAN cDNA, FLJ96663, Homo sapiens DEAD (Asp-Gl... 69 2e-10 tr|Q01AV7|Q01AV7_OSTTA Putative RNA helicase (ISS) OS=Ostreococc... 69 3e-10 tr|Q019E9|Q019E9_OSTTA ATP-dependent RNA helicase (ISS) OS=Ostre... 69 3e-10 tr|Q7YZ26|Q7YZ26_CRYPV DEAD/DEAH box helicase, possible OS=Crypt... 69 3e-10 tr|Q5CWJ1|Q5CWJ1_CRYPV Nucleolar protein GU2. eIF4A-1-family. RN... 69 3e-10 tr|Q5CIN6|Q5CIN6_CRYHO DEAD/DEAH box helicase OS=Cryptosporidium... 69 3e-10 tr|A4V6M8|A4V6M8_DUGJA Nucleolar RNA helicase II/Gu protein (Fra... 69 3e-10 tr|Q4QJI9|Q4QJI9_LEIMA Nucleolar RNA helicase II, putative OS=Le... 69 4e-10 tr|A4HSE3|A4HSE3_LEIIN Nucleolar RNA helicase II, putative (Frag... 69 4e-10 tr|Q8BRU5|Q8BRU5_MOUSE Putative uncharacterized protein OS=Mus m... 68 5e-10 tr|Q5BKP5|Q5BKP5_MOUSE DEAD (Asp-Glu-Ala-Asp) box polypeptide 50... 68 5e-10 tr|A8JGT1|A8JGT1_CHLRE RNA helicase OS=Chlamydomonas reinhardtii... 68 6e-10
>tr|A7QGV9|A7QGV9_VITVI Chromosome chr16 scaffold_94, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038510001 PE=3 SV=1 Length = 600
Score = 107 bits (267), Expect = 7e-22 Identities = 54/65 (83%), Positives = 59/65 (90%) Frame = +3
Query: 483 NPYAVSNFRISEALRRKLKTKGIEALFPIQALTFNAIFKGNDLVGRARTGQGKTLAFVLP 662 NP A+SNFRISE LR KLK+KGIEALFPIQA+TF+ I G+DLVGRARTGQGKTLAFVLP Sbjct: 11 NPNALSNFRISEPLREKLKSKGIEALFPIQAMTFDTILDGSDLVGRARTGQGKTLAFVLP 70
Query: 663 ILESL 677 ILESL Sbjct: 71 ILESL 75
>tr|A9SDC8|A9SDC8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_127777 PE=3 SV=1 Length = 689
Score = 106 bits (265), Expect = 1e-21 Identities = 52/67 (77%), Positives = 59/67 (88%) Frame = +3
Query: 480 INPYAVSNFRISEALRRKLKTKGIEALFPIQALTFNAIFKGNDLVGRARTGQGKTLAFVL 659 ++P AVSNF I +ALR KLK KGIE+LFPIQA TF A+F GND+VGRARTGQGKTLAFVL Sbjct: 107 VDPMAVSNFNIGKALRDKLKAKGIESLFPIQAQTFEAVFDGNDMVGRARTGQGKTLAFVL 166
Query: 660 PILESLS 680 P+LESLS Sbjct: 167 PVLESLS 173
>tr|A3C0Q9|A3C0Q9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028881 PE=3 SV=1 Length = 685
Score = 101 bits (252), Expect = 4e-20 Identities = 50/65 (76%), Positives = 59/65 (90%) Frame = +3
Query: 483 NPYAVSNFRISEALRRKLKTKGIEALFPIQALTFNAIFKGNDLVGRARTGQGKTLAFVLP 662 +P A++NFRISE+LR KLK+KGI+ALFPIQA TF+ + G+DLVGRARTGQGKTLAFVLP Sbjct: 102 DPNALANFRISESLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLP 161
Query: 663 ILESL 677 ILESL Sbjct: 162 ILESL 166
>tr|A6MCY9|A6MCY9_9ORYZ DEAD/DEAH box helicase family protein OS=Oryza brachyantha PE=3 SV=1 Length = 688
Score = 100 bits (250), Expect = 7e-20 Identities = 50/65 (76%), Positives = 58/65 (89%) Frame = +3
Query: 483 NPYAVSNFRISEALRRKLKTKGIEALFPIQALTFNAIFKGNDLVGRARTGQGKTLAFVLP 662 +P A++NFRISE LR KLK+KGI+ALFPIQA TF+ + G+DLVGRARTGQGKTLAFVLP Sbjct: 104 DPNALANFRISEPLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLP 163
Query: 663 ILESL 677 ILESL Sbjct: 164 ILESL 168
>tr|A2Z376|A2Z376_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32075 PE=3 SV=1 Length = 685
Score = 100 bits (250), Expect = 7e-20 Identities = 50/65 (76%), Positives = 58/65 (89%) Frame = +3
Query: 483 NPYAVSNFRISEALRRKLKTKGIEALFPIQALTFNAIFKGNDLVGRARTGQGKTLAFVLP 662 +P A++NFRISE LR KLK+KGI+ALFPIQA TF+ + G+DLVGRARTGQGKTLAFVLP Sbjct: 102 DPNALANFRISEPLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLP 161
Query: 663 ILESL 677 ILESL Sbjct: 162 ILESL 166
>tr|Q9M6R6|Q9M6R6_PHAAU RNA helicase OS=Phaseolus aureus GN=VRH1 PE=2 SV=1 Length = 713
Score = 98.6 bits (244), Expect = 3e-19 Identities = 50/65 (76%), Positives = 56/65 (86%) Frame = +3
Query: 483 NPYAVSNFRISEALRRKLKTKGIEALFPIQALTFNAIFKGNDLVGRARTGQGKTLAFVLP 662 +P AVS RISE LR KLK KGIE+LFPIQA+TF+ + G+DLVGRARTGQGKTLAFVLP Sbjct: 127 DPNAVSKLRISEPLRLKLKEKGIESLFPIQAMTFDLVLDGSDLVGRARTGQGKTLAFVLP 186
Query: 663 ILESL 677 ILESL Sbjct: 187 ILESL 191
>tr|B4FF50|B4FF50_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 506
Score = 97.8 bits (242), Expect = 6e-19 Identities = 47/65 (72%), Positives = 59/65 (90%) Frame = +3
Query: 483 NPYAVSNFRISEALRRKLKTKGIEALFPIQALTFNAIFKGNDLVGRARTGQGKTLAFVLP 662 +P A++NFRISE+LR+ L++KGI++LFPIQA TF+ + G+DLVGRARTGQGKTLAFVLP Sbjct: 119 DPNALTNFRISESLRQSLRSKGIKSLFPIQATTFDLVLDGSDLVGRARTGQGKTLAFVLP 178
Query: 663 ILESL 677 ILESL Sbjct: 179 ILESL 183
>tr|A4RW46|A4RW46_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_15057 PE=3 SV=1 Length = 654
Score = 76.3 bits (186), Expect = 2e-12 Identities = 37/66 (56%), Positives = 47/66 (71%) Frame = +3
Query: 483 NPYAVSNFRISEALRRKLKTKGIEALFPIQALTFNAIFKGNDLVGRARTGQGKTLAFVLP 662 NP A+ NF +SE ++ L+ KG +ALF IQA T G D+VGRARTG GKTLAFVLP Sbjct: 81 NPLALDNFALSEPVKATLRKKGFDALFAIQAETLEIALSGKDVVGRARTGCGKTLAFVLP 140
Query: 663 ILESLS 680 I+E ++ Sbjct: 141 IVEEMA 146
>tr|B5RIC3|B5RIC3_SALSA DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 (Fragment) OS=Salmo salar PE=2 SV=1 Length = 611
Score = 73.2 bits (178), Expect = 1e-11 Identities = 34/65 (52%), Positives = 47/65 (72%) Frame = +3
Query: 492 AVSNFRISEALRRKLKTKGIEALFPIQALTFNAIFKGNDLVGRARTGQGKTLAFVLPILE 671 A SNFRIS + L+ +GI LF IQ TFN++++G D++G+ARTG GKTLAF +P++E Sbjct: 34 AFSNFRISPNTIKLLQARGISYLFDIQTQTFNSVYEGKDVIGQARTGTGKTLAFAIPLIE 93
Query: 672 SLSLD 686 L D Sbjct: 94 KLQND 98
>tr|B3RVR9|B3RVR9_TRIAD Putative uncharacterized protein OS=Trichoplax adhaerens GN=TRIADDRAFT_55752 PE=4 SV=1 Length = 633
Score = 71.6 bits (174), Expect = 4e-11 Identities = 34/58 (58%), Positives = 43/58 (74%) Frame = +3
Query: 504 FRISEALRRKLKTKGIEALFPIQALTFNAIFKGNDLVGRARTGQGKTLAFVLPILESL 677 FRIS A+ LK +GI LFPIQA TF+ ++ G D++G+ARTG GKTL+F LPI E L Sbjct: 57 FRISSAIADSLKERGITYLFPIQAQTFDYVYDGQDVIGQARTGTGKTLSFALPITEKL 114
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